RNA–Protein interactions for RNA: ENST00000470067.5

CUL4A-206, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-206ENST00000470067 AEBP2Q6ZN18 517 aaPredicted RBP30.16■■■□□ 2.42
CUL4A-206ENST00000470067 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
CUL4A-206ENST00000470067 PHF23Q9BUL5 403 aaPredicted RBP26.33■■□□□ 1.81
CUL4A-206ENST00000470067 SENP3Q9H4L4 574 aaPredicted RBP25.68■■□□□ 1.7
CUL4A-206ENST00000470067 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
CUL4A-206ENST00000470067 FOXD1Q16676 465 aa23.69■■□□□ 1.38
CUL4A-206ENST00000470067 ADRA2BP18089 450 aa23.14■■□□□ 1.29
CUL4A-206ENST00000470067 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
CUL4A-206ENST00000470067 PIAS4Q8N2W9 510 aaPredicted RBP22.51■■□□□ 1.19
CUL4A-206ENST00000470067 MSH5O43196 834 aa21.78■■□□□ 1.08
CUL4A-206ENST00000470067 PPP4R3CPQ6ZMV5 832 aa21.68■■□□□ 1.06
CUL4A-206ENST00000470067 KCNA4P22459 653 aa21.6■■□□□ 1.05
CUL4A-206ENST00000470067 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
CUL4A-206ENST00000470067 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
CUL4A-206ENST00000470067 NCBP3Q53F19 620 aaKnown RBP21.33■■□□□ 1.01
CUL4A-206ENST00000470067 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
CUL4A-206ENST00000470067 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
CUL4A-206ENST00000470067 MAPK8IP2Q13387 824 aaPredicted RBP20.84■□□□□ 0.93
CUL4A-206ENST00000470067 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
CUL4A-206ENST00000470067 EHMT2Q96KQ7 1210 aa20.58■□□□□ 0.89
CUL4A-206ENST00000470067 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
CUL4A-206ENST00000470067 RNF216Q9NWF9 866 aaPredicted RBP20.48■□□□□ 0.87
CUL4A-206ENST00000470067 HOXD11P31277 338 aaPredicted RBP20.25■□□□□ 0.83
CUL4A-206ENST00000470067 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
CUL4A-206ENST00000470067 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
CUL4A-206ENST00000470067 ZBTB22O15209 634 aa19.82■□□□□ 0.76
CUL4A-206ENST00000470067 FOXD4L1Q9NU39 408 aa19.81■□□□□ 0.76
CUL4A-206ENST00000470067 DCAF8L1A6NGE4 600 aa19.68■□□□□ 0.74
CUL4A-206ENST00000470067 SLC4A2P04920 1241 aa19.58■□□□□ 0.72
CUL4A-206ENST00000470067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.692e-7■□□□□ 10.7
CUL4A-206ENST00000470067 MYCNP04198 464 aaPredicted RBP19.36■□□□□ 0.69
CUL4A-206ENST00000470067 ABCC9O60706 1549 aa19.28■□□□□ 0.68
CUL4A-206ENST00000470067 ATXN8OSP0DMR3 200 aa19.14■□□□□ 0.65
CUL4A-206ENST00000470067 CCDC180Q9P1Z9 1646 aa19.08■□□□□ 0.65
CUL4A-206ENST00000470067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.08■□□□□ 0.64
CUL4A-206ENST00000470067 HNRNPUL2Q1KMD3 747 aaKnown RBP19.08■□□□□ 0.64
CUL4A-206ENST00000470067 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
CUL4A-206ENST00000470067 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
CUL4A-206ENST00000470067 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
CUL4A-206ENST00000470067 APLP2Q06481 763 aa18.81■□□□□ 0.6
CUL4A-206ENST00000470067 ATF5Q9Y2D1 282 aaPredicted RBP18.69■□□□□ 0.58
CUL4A-206ENST00000470067 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
CUL4A-206ENST00000470067 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
CUL4A-206ENST00000470067 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
CUL4A-206ENST00000470067 CAPN15O75808 1086 aa18.35■□□□□ 0.53
CUL4A-206ENST00000470067 TRHP20396 242 aaPredicted RBP18.35■□□□□ 0.53
CUL4A-206ENST00000470067 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
CUL4A-206ENST00000470067 FKBP8Q14318 412 aa18.2■□□□□ 0.5
CUL4A-206ENST00000470067 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
CUL4A-206ENST00000470067 POLA2Q14181 598 aa18.15■□□□□ 0.5
CUL4A-206ENST00000470067 NACADO15069 1562 aa18.08■□□□□ 0.48
CUL4A-206ENST00000470067 FBLN2P98095 1184 aa18.05■□□□□ 0.48
CUL4A-206ENST00000470067 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.48
CUL4A-206ENST00000470067 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
CUL4A-206ENST00000470067 ABCB7O75027 752 aa17.98■□□□□ 0.47
CUL4A-206ENST00000470067 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
CUL4A-206ENST00000470067 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
CUL4A-206ENST00000470067 CACNB1Q02641 598 aaPredicted RBP17.91■□□□□ 0.46
CUL4A-206ENST00000470067 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
CUL4A-206ENST00000470067 DSG3P32926 999 aa17.88■□□□□ 0.45
CUL4A-206ENST00000470067 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
CUL4A-206ENST00000470067 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
CUL4A-206ENST00000470067 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
CUL4A-206ENST00000470067 ZCCHC6Q5VYS8 1495 aaKnown RBP17.66■□□□□ 0.42
CUL4A-206ENST00000470067 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
CUL4A-206ENST00000470067 FBXO3Q9UK99 471 aa17.55■□□□□ 0.4
CUL4A-206ENST00000470067 PROM2Q8N271 834 aa17.5■□□□□ 0.39
CUL4A-206ENST00000470067 SPDYE2BA6NHP3 402 aa17.46■□□□□ 0.39
CUL4A-206ENST00000470067 SPDYE6P0CI01 402 aa17.46■□□□□ 0.39
CUL4A-206ENST00000470067 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
CUL4A-206ENST00000470067 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
CUL4A-206ENST00000470067 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
CUL4A-206ENST00000470067 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
CUL4A-206ENST00000470067 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.38
CUL4A-206ENST00000470067 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
CUL4A-206ENST00000470067 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
CUL4A-206ENST00000470067 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
CUL4A-206ENST00000470067 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
CUL4A-206ENST00000470067 SSUH2Q9Y2M2 353 aa17.3■□□□□ 0.36
CUL4A-206ENST00000470067 RTN4Q9NQC3 1192 aaKnown RBP17.25■□□□□ 0.35
CUL4A-206ENST00000470067 VASPP50552 380 aaPredicted RBP17.2■□□□□ 0.34
CUL4A-206ENST00000470067 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
CUL4A-206ENST00000470067 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
CUL4A-206ENST00000470067 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
CUL4A-206ENST00000470067 IFNLR1Q8IU57 520 aaPredicted RBP16.96■□□□□ 0.31
CUL4A-206ENST00000470067 PLCD3Q8N3E9 789 aa16.92■□□□□ 0.3
CUL4A-206ENST00000470067 MIER1Q8N108 512 aa16.9■□□□□ 0.3
CUL4A-206ENST00000470067 KLHL34Q8N239 644 aa16.9■□□□□ 0.3
CUL4A-206ENST00000470067 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
CUL4A-206ENST00000470067 SPDYE1Q8NFV5 336 aaPredicted RBP16.86■□□□□ 0.29
CUL4A-206ENST00000470067 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
CUL4A-206ENST00000470067 SPOCK2Q92563 424 aa16.77■□□□□ 0.28
CUL4A-206ENST00000470067 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
CUL4A-206ENST00000470067 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
CUL4A-206ENST00000470067 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
CUL4A-206ENST00000470067 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
CUL4A-206ENST00000470067 ATAD2BQ9ULI0 1458 aa16.72■□□□□ 0.27
CUL4A-206ENST00000470067 PRR29P0C7W0 189 aa16.68■□□□□ 0.26
CUL4A-206ENST00000470067 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
CUL4A-206ENST00000470067 NESP48681 1621 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms