RNA–Protein interactions for RNA: ENST00000469251.1

RERE-211, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-211ENST00000469251 AEBP2Q6ZN18 517 aaPredicted RBP12.68□□□□□ -0.38
RERE-211ENST00000469251 CHIC1Q5VXU3 224 aa12.57□□□□□ -0.4
RERE-211ENST00000469251 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
RERE-211ENST00000469251 SENP3Q9H4L4 574 aaPredicted RBP10.83□□□□□ -0.68
RERE-211ENST00000469251 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
RERE-211ENST00000469251 FOXD1Q16676 465 aa9.98□□□□□ -0.81
RERE-211ENST00000469251 ADRA2BP18089 450 aa9.74□□□□□ -0.85
RERE-211ENST00000469251 PPP6R1Q9UPN7 881 aa9.7□□□□□ -0.86
RERE-211ENST00000469251 POTEDQ86YR6 584 aa9.52□□□□□ -0.89
RERE-211ENST00000469251 PIAS4Q8N2W9 510 aaPredicted RBP9.51□□□□□ -0.89
RERE-211ENST00000469251 MSH5O43196 834 aa9.21□□□□□ -0.94
RERE-211ENST00000469251 PPP4R3CPQ6ZMV5 832 aa9.1□□□□□ -0.95
RERE-211ENST00000469251 KCNA4P22459 653 aa9.03□□□□□ -0.96
RERE-211ENST00000469251 SCAF1Q9H7N4 1312 aaKnown RBP9□□□□□ -0.97
RERE-211ENST00000469251 NCBP3Q53F19 620 aaKnown RBP8.97□□□□□ -0.97
RERE-211ENST00000469251 CNKSR2Q8WXI2 1034 aa8.83□□□□□ -1
RERE-211ENST00000469251 MAPK8IP2Q13387 824 aaPredicted RBP8.78□□□□□ -1
RERE-211ENST00000469251 NPM3O75607 178 aaKnown RBP8.75□□□□□ -1.01
RERE-211ENST00000469251 SLC4A1APQ9BWU0 796 aaKnown RBP8.67□□□□□ -1.02
RERE-211ENST00000469251 DMRT2Q9Y5R5 561 aa8.63□□□□□ -1.03
RERE-211ENST00000469251 EHMT2Q96KQ7 1210 aa8.61□□□□□ -1.03
RERE-211ENST00000469251 RNF216Q9NWF9 866 aaPredicted RBP8.6□□□□□ -1.03
RERE-211ENST00000469251 HOXD11P31277 338 aaPredicted RBP8.5□□□□□ -1.05
RERE-211ENST00000469251 DNAJC5BQ9UF47 199 aa8.41□□□□□ -1.06
RERE-211ENST00000469251 DCAF8L1A6NGE4 600 aa8.37□□□□□ -1.07
RERE-211ENST00000469251 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
RERE-211ENST00000469251 FOXD4L1Q9NU39 408 aa8.3□□□□□ -1.08
RERE-211ENST00000469251 ZBTB22O15209 634 aa8.26□□□□□ -1.09
RERE-211ENST00000469251 SLC4A2P04920 1241 aa8.19□□□□□ -1.1
RERE-211ENST00000469251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.19□□□□□ -1.14e-9■□□□□ 9.7
RERE-211ENST00000469251 MYCNP04198 464 aaPredicted RBP8.12□□□□□ -1.11
RERE-211ENST00000469251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.04□□□□□ -1.12
RERE-211ENST00000469251 HNRNPUL2Q1KMD3 747 aaKnown RBP8.04□□□□□ -1.12
RERE-211ENST00000469251 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
RERE-211ENST00000469251 SAMD1Q6SPF0 538 aaPredicted RBP7.99□□□□□ -1.13
RERE-211ENST00000469251 U3KPZ7 1027 aaPredicted RBP7.99□□□□□ -1.13
RERE-211ENST00000469251 APLP2Q06481 763 aa7.95□□□□□ -1.14
RERE-211ENST00000469251 RNF39Q9H2S5 420 aa7.85□□□□□ -1.15
RERE-211ENST00000469251 ATF5Q9Y2D1 282 aaPredicted RBP7.83□□□□□ -1.16
RERE-211ENST00000469251 C1QBPQ07021 282 aaKnown RBP7.81□□□□□ -1.16
RERE-211ENST00000469251 CAPN15O75808 1086 aa7.78□□□□□ -1.16
RERE-211ENST00000469251 TRHP20396 242 aaPredicted RBP7.77□□□□□ -1.17
RERE-211ENST00000469251 ZNF219Q9P2Y4 722 aaPredicted RBP7.76□□□□□ -1.17
RERE-211ENST00000469251 SPINK5Q9NQ38 1064 aaPredicted RBP7.73□□□□□ -1.17
RERE-211ENST00000469251 POLA2Q14181 598 aa7.65□□□□□ -1.18
RERE-211ENST00000469251 CACNB1Q02641 598 aaPredicted RBP7.62□□□□□ -1.19
RERE-211ENST00000469251 FKBP8Q14318 412 aa7.62□□□□□ -1.19
RERE-211ENST00000469251 ABCB7O75027 752 aa7.61□□□□□ -1.19
RERE-211ENST00000469251 FBLN2P98095 1184 aa7.61□□□□□ -1.19
RERE-211ENST00000469251 ZBTB12Q9Y330 459 aaPredicted RBP7.56□□□□□ -1.2
RERE-211ENST00000469251 DSG3P32926 999 aa7.53□□□□□ -1.2
RERE-211ENST00000469251 MKRN4PQ13434 485 aaPredicted RBP7.49□□□□□ -1.21
RERE-211ENST00000469251 SPDYE4A6NLX3 237 aa7.48□□□□□ -1.21
RERE-211ENST00000469251 OSCARQ8IYS5 282 aa7.36□□□□□ -1.23
RERE-211ENST00000469251 ZNF692Q9BU19 519 aaPredicted RBP7.36□□□□□ -1.23
RERE-211ENST00000469251 FBXO3Q9UK99 471 aa7.35□□□□□ -1.23
RERE-211ENST00000469251 SPDYE2BA6NHP3 402 aa7.34□□□□□ -1.23
RERE-211ENST00000469251 SPDYE6P0CI01 402 aa7.34□□□□□ -1.23
RERE-211ENST00000469251 SPDYE2Q495Y8 402 aa7.34□□□□□ -1.23
RERE-211ENST00000469251 POTEHQ6S545 545 aa7.31□□□□□ -1.24
RERE-211ENST00000469251 NISCHQ9Y2I1 1504 aa7.27□□□□□ -1.25
RERE-211ENST00000469251 PROM2Q8N271 834 aa7.27□□□□□ -1.25
RERE-211ENST00000469251 PABPN1Q86U42 306 aaKnown RBP eCLIP7.24□□□□□ -1.25
RERE-211ENST00000469251 RBM42Q9BTD8 480 aaKnown RBP7.24□□□□□ -1.25
RERE-211ENST00000469251 SSUH2Q9Y2M2 353 aa7.24□□□□□ -1.25
RERE-211ENST00000469251 AMER1Q5JTC6 1135 aaPredicted RBP7.21□□□□□ -1.26
RERE-211ENST00000469251 VASPP50552 380 aaPredicted RBP7.19□□□□□ -1.26
RERE-211ENST00000469251 STAG3Q9UJ98 1225 aa7.19□□□□□ -1.26
RERE-211ENST00000469251 AKT1S1Q96B36 256 aa7.15□□□□□ -1.26
RERE-211ENST00000469251 RTN4Q9NQC3 1192 aaKnown RBP7.14□□□□□ -1.27
RERE-211ENST00000469251 PLEKHG5O94827 1062 aa7.13□□□□□ -1.27
RERE-211ENST00000469251 PLCD3Q8N3E9 789 aa7.13□□□□□ -1.27
RERE-211ENST00000469251 MIER1Q8N108 512 aa7.12□□□□□ -1.27
RERE-211ENST00000469251 KLHL34Q8N239 644 aa7.12□□□□□ -1.27
RERE-211ENST00000469251 SPDYE1Q8NFV5 336 aaPredicted RBP7.11□□□□□ -1.27
RERE-211ENST00000469251 CLEC11AQ9Y240 323 aa7.1□□□□□ -1.27
RERE-211ENST00000469251 IFNLR1Q8IU57 520 aaPredicted RBP7.07□□□□□ -1.28
RERE-211ENST00000469251 REM2Q8IYK8 340 aaPredicted RBP7.07□□□□□ -1.28
RERE-211ENST00000469251 PRR29P0C7W0 189 aa7.05□□□□□ -1.28
RERE-211ENST00000469251 ZBTB47Q9UFB7 747 aaPredicted RBP7.05□□□□□ -1.28
RERE-211ENST00000469251 SPOCK2Q92563 424 aa7.02□□□□□ -1.29
RERE-211ENST00000469251 PITPNM1O00562 1244 aa6.98□□□□□ -1.29
RERE-211ENST00000469251 DCAF8L2P0C7V8 631 aa6.93□□□□□ -1.3
RERE-211ENST00000469251 CIZ1Q9ULV3 898 aaPredicted RBP6.93□□□□□ -1.3
RERE-211ENST00000469251 CREBZFQ9NS37 354 aa6.91□□□□□ -1.3
RERE-211ENST00000469251 ECM2O94769 699 aaPredicted RBP6.89□□□□□ -1.31
RERE-211ENST00000469251 NPM1P06748 294 aaKnown RBP eCLIP6.89□□□□□ -1.31
RERE-211ENST00000469251 PKD2Q13563 968 aa6.88□□□□□ -1.31
RERE-211ENST00000469251 GSE1Q14687 1217 aa6.87□□□□□ -1.31
RERE-211ENST00000469251 DCAF8Q5TAQ9 597 aa6.87□□□□□ -1.31
RERE-211ENST00000469251 CHADLQ6NUI6 762 aa6.86□□□□□ -1.31
RERE-211ENST00000469251 CHRDL2Q6WN34 429 aa6.85□□□□□ -1.31
RERE-211ENST00000469251 FAM212AQ96EL1 285 aa6.85□□□□□ -1.31
RERE-211ENST00000469251 PRKAR2AP13861 404 aaKnown RBP6.84□□□□□ -1.31
RERE-211ENST00000469251 TRIM41Q8WV44 630 aa6.83□□□□□ -1.32
RERE-211ENST00000469251 MNX1P50219 401 aaPredicted RBP6.82□□□□□ -1.32
RERE-211ENST00000469251 NUBP1P53384 320 aa6.82□□□□□ -1.32
RERE-211ENST00000469251 FXR2P51116 673 aaKnown RBP eCLIP6.81□□□□□ -1.32
RERE-211ENST00000469251 FARP1Q9Y4F1 1045 aaPredicted RBP6.81□□□□□ -1.32
RERE-211ENST00000469251 CCDC180Q9P1Z9 1646 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms