RNA–Protein interactions for RNA: ENST00000468472.1

AC006254.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC006254.1, Length 5,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006254.1-201ENST00000468472 DCAF8L2P0C7V8 631 aa22.25■■□□□ 1.15
AC006254.1-201ENST00000468472 NISCHQ9Y2I1 1504 aa21.23■□□□□ 0.99
AC006254.1-201ENST00000468472 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
AC006254.1-201ENST00000468472 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
AC006254.1-201ENST00000468472 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
AC006254.1-201ENST00000468472 APLP2Q06481 763 aa19.96■□□□□ 0.79
AC006254.1-201ENST00000468472 FAM9AQ8IZU1 332 aaPredicted RBP19.82■□□□□ 0.76
AC006254.1-201ENST00000468472 TTBK1Q5TCY1 1321 aaPredicted RBP19.64■□□□□ 0.73
AC006254.1-201ENST00000468472 PELP1Q8IZL8 1130 aaKnown RBP19.59■□□□□ 0.73
AC006254.1-201ENST00000468472 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
AC006254.1-201ENST00000468472 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
AC006254.1-201ENST00000468472 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
AC006254.1-201ENST00000468472 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
AC006254.1-201ENST00000468472 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
AC006254.1-201ENST00000468472 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
AC006254.1-201ENST00000468472 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
AC006254.1-201ENST00000468472 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
AC006254.1-201ENST00000468472 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
AC006254.1-201ENST00000468472 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
AC006254.1-201ENST00000468472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
AC006254.1-201ENST00000468472 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
AC006254.1-201ENST00000468472 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
AC006254.1-201ENST00000468472 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
AC006254.1-201ENST00000468472 NEFLP07196 543 aa18.65■□□□□ 0.58
AC006254.1-201ENST00000468472 ITGAEP38570 1179 aa18.64■□□□□ 0.57
AC006254.1-201ENST00000468472 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
AC006254.1-201ENST00000468472 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
AC006254.1-201ENST00000468472 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
AC006254.1-201ENST00000468472 ABCC9O60706 1549 aa18.48■□□□□ 0.55
AC006254.1-201ENST00000468472 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
AC006254.1-201ENST00000468472 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
AC006254.1-201ENST00000468472 HRCP23327 699 aa18.29■□□□□ 0.52
AC006254.1-201ENST00000468472 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
AC006254.1-201ENST00000468472 FAM50AQ14320 339 aaKnown RBP18.19■□□□□ 0.5
AC006254.1-201ENST00000468472 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
AC006254.1-201ENST00000468472 DAXXQ9UER7 740 aaPredicted RBP18.1■□□□□ 0.49
AC006254.1-201ENST00000468472 TRIM52Q96A61 297 aa18.09■□□□□ 0.49
AC006254.1-201ENST00000468472 FBLN2P98095 1184 aa18.03■□□□□ 0.48
AC006254.1-201ENST00000468472 NEUROD1Q13562 356 aa17.97■□□□□ 0.47
AC006254.1-201ENST00000468472 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
AC006254.1-201ENST00000468472 ZNF326Q5BKZ1 582 aaKnown RBP17.87■□□□□ 0.45
AC006254.1-201ENST00000468472 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
AC006254.1-201ENST00000468472 MYT1Q01538 1121 aa17.81■□□□□ 0.44
AC006254.1-201ENST00000468472 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
AC006254.1-201ENST00000468472 ARID3CA6NKF2 412 aa17.8■□□□□ 0.44
AC006254.1-201ENST00000468472 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
AC006254.1-201ENST00000468472 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
AC006254.1-201ENST00000468472 ANP32CO43423 234 aa17.7■□□□□ 0.42
AC006254.1-201ENST00000468472 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
AC006254.1-201ENST00000468472 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
AC006254.1-201ENST00000468472 BCANQ96GW7 911 aa17.65■□□□□ 0.42
AC006254.1-201ENST00000468472 CDK11AQ9UQ88 783 aaPredicted RBP17.61■□□□□ 0.41
AC006254.1-201ENST00000468472 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.4
AC006254.1-201ENST00000468472 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
AC006254.1-201ENST00000468472 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
AC006254.1-201ENST00000468472 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
AC006254.1-201ENST00000468472 NEFMP07197 916 aa17.49■□□□□ 0.39
AC006254.1-201ENST00000468472 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
AC006254.1-201ENST00000468472 ESF1Q9H501 851 aaKnown RBP17.47■□□□□ 0.39
AC006254.1-201ENST00000468472 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
AC006254.1-201ENST00000468472 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
AC006254.1-201ENST00000468472 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
AC006254.1-201ENST00000468472 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
AC006254.1-201ENST00000468472 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
AC006254.1-201ENST00000468472 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
AC006254.1-201ENST00000468472 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
AC006254.1-201ENST00000468472 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
AC006254.1-201ENST00000468472 CHIC2Q9UKJ5 165 aa17.3■□□□□ 0.36
AC006254.1-201ENST00000468472 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
AC006254.1-201ENST00000468472 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
AC006254.1-201ENST00000468472 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
AC006254.1-201ENST00000468472 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
AC006254.1-201ENST00000468472 TSPY4P0CV99 314 aa17.2■□□□□ 0.34
AC006254.1-201ENST00000468472 TSPY10P0CW01 314 aa17.2■□□□□ 0.34
AC006254.1-201ENST00000468472 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
AC006254.1-201ENST00000468472 ACIN1Q9UKV3 1341 aaKnown RBP17.17■□□□□ 0.34
AC006254.1-201ENST00000468472 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
AC006254.1-201ENST00000468472 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
AC006254.1-201ENST00000468472 CLIP1P30622 1438 aa17.12■□□□□ 0.33
AC006254.1-201ENST00000468472 HNRNPUQ00839 825 aaKnown RBP eCLIP17.12■□□□□ 0.33
AC006254.1-201ENST00000468472 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
AC006254.1-201ENST00000468472 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
AC006254.1-201ENST00000468472 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
AC006254.1-201ENST00000468472 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
AC006254.1-201ENST00000468472 FKBP8Q14318 412 aa17.07■□□□□ 0.32
AC006254.1-201ENST00000468472 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
AC006254.1-201ENST00000468472 KCNH8Q96L42 1107 aa17.05■□□□□ 0.32
AC006254.1-201ENST00000468472 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
AC006254.1-201ENST00000468472 RRP7BPQ9NSQ0 103 aa17.03■□□□□ 0.32
AC006254.1-201ENST00000468472 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
AC006254.1-201ENST00000468472 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.31
AC006254.1-201ENST00000468472 NACADO15069 1562 aa17■□□□□ 0.31
AC006254.1-201ENST00000468472 GOLGA3Q08378 1498 aa17■□□□□ 0.31
AC006254.1-201ENST00000468472 PLEKHD1A6NEE1 506 aa17■□□□□ 0.31
AC006254.1-201ENST00000468472 EEA1Q15075 1411 aa16.98■□□□□ 0.31
AC006254.1-201ENST00000468472 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
AC006254.1-201ENST00000468472 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
AC006254.1-201ENST00000468472 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
AC006254.1-201ENST00000468472 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
AC006254.1-201ENST00000468472 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 323.7 ms