RNA–Protein interactions for RNA: ENST00000466513.1

CLTC-203, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-203ENST00000466513 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
CLTC-203ENST00000466513 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
CLTC-203ENST00000466513 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
CLTC-203ENST00000466513 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
CLTC-203ENST00000466513 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
CLTC-203ENST00000466513 FOXD1Q16676 465 aa21.92■■□□□ 1.1
CLTC-203ENST00000466513 ADRA2BP18089 450 aa21.22■□□□□ 0.99
CLTC-203ENST00000466513 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
CLTC-203ENST00000466513 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
CLTC-203ENST00000466513 MSH5O43196 834 aa20.14■□□□□ 0.81
CLTC-203ENST00000466513 PPP4R3CPQ6ZMV5 832 aa19.66■□□□□ 0.74
CLTC-203ENST00000466513 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
CLTC-203ENST00000466513 KCNA4P22459 653 aa19.37■□□□□ 0.69
CLTC-203ENST00000466513 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
CLTC-203ENST00000466513 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
CLTC-203ENST00000466513 CNKSR2Q8WXI2 1034 aa19.05■□□□□ 0.64
CLTC-203ENST00000466513 NPM3O75607 178 aaKnown RBP18.9■□□□□ 0.62
CLTC-203ENST00000466513 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
CLTC-203ENST00000466513 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
CLTC-203ENST00000466513 HOXD11P31277 338 aaPredicted RBP18.53■□□□□ 0.56
CLTC-203ENST00000466513 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
CLTC-203ENST00000466513 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
CLTC-203ENST00000466513 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
CLTC-203ENST00000466513 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
CLTC-203ENST00000466513 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
CLTC-203ENST00000466513 ZBTB22O15209 634 aa17.83■□□□□ 0.44
CLTC-203ENST00000466513 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
CLTC-203ENST00000466513 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
CLTC-203ENST00000466513 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
CLTC-203ENST00000466513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.422e-7■■■□□ 18.5
CLTC-203ENST00000466513 MYCNP04198 464 aaPredicted RBP17.44■□□□□ 0.38
CLTC-203ENST00000466513 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
CLTC-203ENST00000466513 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
CLTC-203ENST00000466513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
CLTC-203ENST00000466513 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
CLTC-203ENST00000466513 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
CLTC-203ENST00000466513 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
CLTC-203ENST00000466513 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
CLTC-203ENST00000466513 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
CLTC-203ENST00000466513 APLP2Q06481 763 aa16.99■□□□□ 0.31
CLTC-203ENST00000466513 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
CLTC-203ENST00000466513 CAPN15O75808 1086 aa16.84■□□□□ 0.29
CLTC-203ENST00000466513 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
CLTC-203ENST00000466513 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
CLTC-203ENST00000466513 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
CLTC-203ENST00000466513 POLA2Q14181 598 aa16.55■□□□□ 0.24
CLTC-203ENST00000466513 ABCB7O75027 752 aa16.54■□□□□ 0.24
CLTC-203ENST00000466513 DSG3P32926 999 aa16.49■□□□□ 0.23
CLTC-203ENST00000466513 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
CLTC-203ENST00000466513 FBLN2P98095 1184 aa16.25■□□□□ 0.19
CLTC-203ENST00000466513 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
CLTC-203ENST00000466513 FKBP8Q14318 412 aa16.12■□□□□ 0.17
CLTC-203ENST00000466513 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
CLTC-203ENST00000466513 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
CLTC-203ENST00000466513 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
CLTC-203ENST00000466513 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
CLTC-203ENST00000466513 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
CLTC-203ENST00000466513 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
CLTC-203ENST00000466513 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
CLTC-203ENST00000466513 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
CLTC-203ENST00000466513 PROM2Q8N271 834 aa15.67■□□□□ 0.1
CLTC-203ENST00000466513 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLTC-203ENST00000466513 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
CLTC-203ENST00000466513 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
CLTC-203ENST00000466513 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
CLTC-203ENST00000466513 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
CLTC-203ENST00000466513 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.04
CLTC-203ENST00000466513 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
CLTC-203ENST00000466513 VASPP50552 380 aaPredicted RBP15.28■□□□□ 0.04
CLTC-203ENST00000466513 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
CLTC-203ENST00000466513 PRR29P0C7W0 189 aa15.15■□□□□ 0.02
CLTC-203ENST00000466513 MIER1Q8N108 512 aa15.14■□□□□ 0.01
CLTC-203ENST00000466513 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
CLTC-203ENST00000466513 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
CLTC-203ENST00000466513 PLEKHG5O94827 1062 aa15.02■□□□□ -0
CLTC-203ENST00000466513 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
CLTC-203ENST00000466513 KLHL34Q8N239 644 aa15.02■□□□□ -0
CLTC-203ENST00000466513 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
CLTC-203ENST00000466513 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
CLTC-203ENST00000466513 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
CLTC-203ENST00000466513 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.022e-10■■■■■ 31.3
CLTC-203ENST00000466513 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
CLTC-203ENST00000466513 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
CLTC-203ENST00000466513 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
CLTC-203ENST00000466513 PRKAR2AP13861 404 aaKnown RBP14.86□□□□□ -0.03
CLTC-203ENST00000466513 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
CLTC-203ENST00000466513 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
CLTC-203ENST00000466513 FARP1Q9Y4F1 1045 aaPredicted RBP14.76□□□□□ -0.05
CLTC-203ENST00000466513 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
CLTC-203ENST00000466513 NUBP1P53384 320 aa14.71□□□□□ -0.05
CLTC-203ENST00000466513 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
CLTC-203ENST00000466513 PKD2Q13563 968 aa14.64□□□□□ -0.07
CLTC-203ENST00000466513 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
CLTC-203ENST00000466513 DCAF8Q5TAQ9 597 aa14.61□□□□□ -0.07
CLTC-203ENST00000466513 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
CLTC-203ENST00000466513 GSE1Q14687 1217 aa14.58□□□□□ -0.08
CLTC-203ENST00000466513 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
CLTC-203ENST00000466513 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
CLTC-203ENST00000466513 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
CLTC-203ENST00000466513 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms