RNA–Protein interactions for RNA: ENST00000466459.5

IFRD1-211, Transcript of interferon related developmental regulator 1, humanhuman

TSL 5

Gene IFRD1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-211ENST00000466459 AEBP2Q6ZN18 517 aaPredicted RBP30.38■■■□□ 2.45
IFRD1-211ENST00000466459 CHIC1Q5VXU3 224 aa28.92■■■□□ 2.22
IFRD1-211ENST00000466459 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
IFRD1-211ENST00000466459 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.69
IFRD1-211ENST00000466459 FOXD1Q16676 465 aa24.14■■□□□ 1.45
IFRD1-211ENST00000466459 PLPPR3Q6T4P5 718 aa23.13■■□□□ 1.29
IFRD1-211ENST00000466459 MSH5O43196 834 aa22.62■■□□□ 1.21
IFRD1-211ENST00000466459 PPP6R1Q9UPN7 881 aa22.59■■□□□ 1.21
IFRD1-211ENST00000466459 PIAS4Q8N2W9 510 aaPredicted RBP22.57■■□□□ 1.2
IFRD1-211ENST00000466459 ADRA2BP18089 450 aa22.51■■□□□ 1.19
IFRD1-211ENST00000466459 POTEDQ86YR6 584 aa21.97■■□□□ 1.11
IFRD1-211ENST00000466459 SCAF1Q9H7N4 1312 aaKnown RBP20.64■□□□□ 0.89
IFRD1-211ENST00000466459 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
IFRD1-211ENST00000466459 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.89
IFRD1-211ENST00000466459 PPP4R3CPQ6ZMV5 832 aa20.26■□□□□ 0.83
IFRD1-211ENST00000466459 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
IFRD1-211ENST00000466459 HOXD11P31277 338 aaPredicted RBP19.85■□□□□ 0.77
IFRD1-211ENST00000466459 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
IFRD1-211ENST00000466459 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
IFRD1-211ENST00000466459 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
IFRD1-211ENST00000466459 CACNB1Q02641 598 aaPredicted RBP19.34■□□□□ 0.69
IFRD1-211ENST00000466459 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
IFRD1-211ENST00000466459 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
IFRD1-211ENST00000466459 NPM3O75607 178 aaKnown RBP19.21■□□□□ 0.67
IFRD1-211ENST00000466459 C1QBPQ07021 282 aaKnown RBP19.03■□□□□ 0.64
IFRD1-211ENST00000466459 KCNA4P22459 653 aa18.87■□□□□ 0.61
IFRD1-211ENST00000466459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.612e-9■■■■□ 21.9
IFRD1-211ENST00000466459 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
IFRD1-211ENST00000466459 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
IFRD1-211ENST00000466459 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
IFRD1-211ENST00000466459 CAPN15O75808 1086 aa18.14■□□□□ 0.49
IFRD1-211ENST00000466459 DSG3P32926 999 aa18.06■□□□□ 0.48
IFRD1-211ENST00000466459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.48
IFRD1-211ENST00000466459 APLP2Q06481 763 aa18.02■□□□□ 0.48
IFRD1-211ENST00000466459 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.48
IFRD1-211ENST00000466459 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
IFRD1-211ENST00000466459 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
IFRD1-211ENST00000466459 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
IFRD1-211ENST00000466459 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
IFRD1-211ENST00000466459 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
IFRD1-211ENST00000466459 ABCB7O75027 752 aa17.72■□□□□ 0.43
IFRD1-211ENST00000466459 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
IFRD1-211ENST00000466459 POLA2Q14181 598 aa17.4■□□□□ 0.38
IFRD1-211ENST00000466459 ZBTB22O15209 634 aa17.35■□□□□ 0.37
IFRD1-211ENST00000466459 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
IFRD1-211ENST00000466459 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
IFRD1-211ENST00000466459 POTEHQ6S545 545 aa17.22■□□□□ 0.35
IFRD1-211ENST00000466459 ATXN8OSP0DMR3 200 aa17.12■□□□□ 0.33
IFRD1-211ENST00000466459 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
IFRD1-211ENST00000466459 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
IFRD1-211ENST00000466459 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
IFRD1-211ENST00000466459 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
IFRD1-211ENST00000466459 FBLN2P98095 1184 aa16.69■□□□□ 0.26
IFRD1-211ENST00000466459 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
IFRD1-211ENST00000466459 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
IFRD1-211ENST00000466459 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
IFRD1-211ENST00000466459 SPDYE2Q495Y8 402 aa16.59■□□□□ 0.25
IFRD1-211ENST00000466459 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
IFRD1-211ENST00000466459 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
IFRD1-211ENST00000466459 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
IFRD1-211ENST00000466459 PIP4P2Q8N4L2 257 aa16.44■□□□□ 0.22
IFRD1-211ENST00000466459 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
IFRD1-211ENST00000466459 SSUH2Q9Y2M2 353 aa16.38■□□□□ 0.21
IFRD1-211ENST00000466459 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
IFRD1-211ENST00000466459 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
IFRD1-211ENST00000466459 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
IFRD1-211ENST00000466459 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
IFRD1-211ENST00000466459 SP7Q8TDD2 431 aaPredicted RBP16.17■□□□□ 0.18
IFRD1-211ENST00000466459 HAX1O00165 279 aa16.11■□□□□ 0.17
IFRD1-211ENST00000466459 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
IFRD1-211ENST00000466459 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
IFRD1-211ENST00000466459 PRR29P0C7W0 189 aa15.94■□□□□ 0.14
IFRD1-211ENST00000466459 EVX2Q03828 476 aa15.91■□□□□ 0.14
IFRD1-211ENST00000466459 CHADLQ6NUI6 762 aa15.87■□□□□ 0.13
IFRD1-211ENST00000466459 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
IFRD1-211ENST00000466459 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
IFRD1-211ENST00000466459 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
IFRD1-211ENST00000466459 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
IFRD1-211ENST00000466459 GABBR2O75899 941 aa15.58■□□□□ 0.08
IFRD1-211ENST00000466459 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
IFRD1-211ENST00000466459 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
IFRD1-211ENST00000466459 PROM2Q8N271 834 aa15.48■□□□□ 0.07
IFRD1-211ENST00000466459 CLCN6P51797 869 aa15.43■□□□□ 0.06
IFRD1-211ENST00000466459 ZNF579Q8NAF0 562 aaKnown RBP15.37■□□□□ 0.05
IFRD1-211ENST00000466459 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
IFRD1-211ENST00000466459 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
IFRD1-211ENST00000466459 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
IFRD1-211ENST00000466459 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
IFRD1-211ENST00000466459 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
IFRD1-211ENST00000466459 LHX8Q68G74 356 aa15.16■□□□□ 0.02
IFRD1-211ENST00000466459 DCBLD2Q96PD2 775 aa15.16■□□□□ 0.02
IFRD1-211ENST00000466459 GALR2O43603 387 aaPredicted RBP15.14■□□□□ 0.01
IFRD1-211ENST00000466459 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
IFRD1-211ENST00000466459 PLEKHG5O94827 1062 aa15.06■□□□□ 0
IFRD1-211ENST00000466459 FKBP8Q14318 412 aa15.03■□□□□ -0
IFRD1-211ENST00000466459 MIER1Q8N108 512 aa15.03■□□□□ -0
IFRD1-211ENST00000466459 TSPYL2Q9H2G4 693 aaPredicted RBP14.98□□□□□ -0.01
IFRD1-211ENST00000466459 CCDC61Q9Y6R9 512 aa14.96□□□□□ -0.01
IFRD1-211ENST00000466459 MS4A3Q96HJ5 214 aa14.95□□□□□ -0.02
IFRD1-211ENST00000466459 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms