RNA–Protein interactions for RNA: ENST00000463859.5

SRSF11-208, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 5

Gene SRSF11, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-208ENST00000463859 AEBP2Q6ZN18 517 aaPredicted RBP32.54■■■□□ 2.8
SRSF11-208ENST00000463859 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
SRSF11-208ENST00000463859 SENP3Q9H4L4 574 aaPredicted RBP27.86■■■□□ 2.05
SRSF11-208ENST00000463859 PHF23Q9BUL5 403 aaPredicted RBP27.4■■□□□ 1.98
SRSF11-208ENST00000463859 FOXD1Q16676 465 aa25.94■■□□□ 1.74
SRSF11-208ENST00000463859 MSH5O43196 834 aa24.43■■□□□ 1.5
SRSF11-208ENST00000463859 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
SRSF11-208ENST00000463859 POTEDQ86YR6 584 aa24.2■■□□□ 1.46
SRSF11-208ENST00000463859 PIAS4Q8N2W9 510 aaPredicted RBP24.17■■□□□ 1.46
SRSF11-208ENST00000463859 PPP6R1Q9UPN7 881 aa24.03■■□□□ 1.44
SRSF11-208ENST00000463859 ADRA2BP18089 450 aa23.92■■□□□ 1.42
SRSF11-208ENST00000463859 DMRT2Q9Y5R5 561 aa22.05■■□□□ 1.12
SRSF11-208ENST00000463859 MAPK8IP2Q13387 824 aaPredicted RBP22.03■■□□□ 1.12
SRSF11-208ENST00000463859 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
SRSF11-208ENST00000463859 PPP4R3CPQ6ZMV5 832 aa21.35■■□□□ 1.01
SRSF11-208ENST00000463859 HOXD11P31277 338 aaPredicted RBP21.17■□□□□ 0.98
SRSF11-208ENST00000463859 CACNB1Q02641 598 aaPredicted RBP21.04■□□□□ 0.96
SRSF11-208ENST00000463859 CNKSR2Q8WXI2 1034 aa21.04■□□□□ 0.96
SRSF11-208ENST00000463859 DCAF8L1A6NGE4 600 aa21.03■□□□□ 0.96
SRSF11-208ENST00000463859 RNF216Q9NWF9 866 aaPredicted RBP20.93■□□□□ 0.94
SRSF11-208ENST00000463859 RNF39Q9H2S5 420 aa20.8■□□□□ 0.92
SRSF11-208ENST00000463859 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
SRSF11-208ENST00000463859 C1QBPQ07021 282 aaKnown RBP20.51■□□□□ 0.87
SRSF11-208ENST00000463859 NCBP3Q53F19 620 aaKnown RBP20.49■□□□□ 0.87
SRSF11-208ENST00000463859 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
SRSF11-208ENST00000463859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.811e-10■■■□□ 19.1
SRSF11-208ENST00000463859 U3KPZ7 1027 aaPredicted RBP19.67■□□□□ 0.74
SRSF11-208ENST00000463859 KCNA4P22459 653 aa19.53■□□□□ 0.72
SRSF11-208ENST00000463859 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
SRSF11-208ENST00000463859 CAPN15O75808 1086 aa19.38■□□□□ 0.69
SRSF11-208ENST00000463859 DSG3P32926 999 aa19.38■□□□□ 0.69
SRSF11-208ENST00000463859 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
SRSF11-208ENST00000463859 APLP2Q06481 763 aa19.16■□□□□ 0.66
SRSF11-208ENST00000463859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
SRSF11-208ENST00000463859 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
SRSF11-208ENST00000463859 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
SRSF11-208ENST00000463859 TRHP20396 242 aaPredicted RBP19■□□□□ 0.63
SRSF11-208ENST00000463859 SAMD1Q6SPF0 538 aaPredicted RBP18.94■□□□□ 0.62
SRSF11-208ENST00000463859 POTEHQ6S545 545 aa18.91■□□□□ 0.62
SRSF11-208ENST00000463859 ABCB7O75027 752 aa18.88■□□□□ 0.61
SRSF11-208ENST00000463859 MYCNP04198 464 aaPredicted RBP18.69■□□□□ 0.58
SRSF11-208ENST00000463859 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
SRSF11-208ENST00000463859 POLA2Q14181 598 aa18.46■□□□□ 0.55
SRSF11-208ENST00000463859 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
SRSF11-208ENST00000463859 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
SRSF11-208ENST00000463859 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
SRSF11-208ENST00000463859 CHRDL2Q6WN34 429 aa18.19■□□□□ 0.5
SRSF11-208ENST00000463859 ZBTB12Q9Y330 459 aaPredicted RBP18.16■□□□□ 0.5
SRSF11-208ENST00000463859 AKT1S1Q96B36 256 aa18.05■□□□□ 0.48
SRSF11-208ENST00000463859 ZBTB22O15209 634 aa17.95■□□□□ 0.46
SRSF11-208ENST00000463859 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
SRSF11-208ENST00000463859 ATXN8OSP0DMR3 200 aa17.86■□□□□ 0.45
SRSF11-208ENST00000463859 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
SRSF11-208ENST00000463859 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
SRSF11-208ENST00000463859 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
SRSF11-208ENST00000463859 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
SRSF11-208ENST00000463859 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■■■■□ 21.3
SRSF11-208ENST00000463859 SPDYE2BA6NHP3 402 aa17.56■□□□□ 0.4
SRSF11-208ENST00000463859 SPDYE6P0CI01 402 aa17.56■□□□□ 0.4
SRSF11-208ENST00000463859 FBLN2P98095 1184 aa17.56■□□□□ 0.4
SRSF11-208ENST00000463859 SPDYE2Q495Y8 402 aa17.56■□□□□ 0.4
SRSF11-208ENST00000463859 HAX1O00165 279 aa17.4■□□□□ 0.38
SRSF11-208ENST00000463859 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
SRSF11-208ENST00000463859 SPDYE1Q8NFV5 336 aaPredicted RBP17.3■□□□□ 0.36
SRSF11-208ENST00000463859 SSUH2Q9Y2M2 353 aa17.3■□□□□ 0.36
SRSF11-208ENST00000463859 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
SRSF11-208ENST00000463859 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
SRSF11-208ENST00000463859 PRKAR2AP13861 404 aaKnown RBP17.18■□□□□ 0.34
SRSF11-208ENST00000463859 EVX2Q03828 476 aa17.16■□□□□ 0.34
SRSF11-208ENST00000463859 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
SRSF11-208ENST00000463859 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.314e-15■□□□□ 9.1
SRSF11-208ENST00000463859 PRR29P0C7W0 189 aa16.92■□□□□ 0.3
SRSF11-208ENST00000463859 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
SRSF11-208ENST00000463859 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
SRSF11-208ENST00000463859 GABBR2O75899 941 aa16.8■□□□□ 0.28
SRSF11-208ENST00000463859 FARP1Q9Y4F1 1045 aaPredicted RBP16.68■□□□□ 0.26
SRSF11-208ENST00000463859 CD44P16070 742 aaKnown RBP16.63■□□□□ 0.25
SRSF11-208ENST00000463859 CLCN6P51797 869 aa16.57■□□□□ 0.24
SRSF11-208ENST00000463859 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
SRSF11-208ENST00000463859 LHX8Q68G74 356 aa16.51■□□□□ 0.23
SRSF11-208ENST00000463859 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
SRSF11-208ENST00000463859 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
SRSF11-208ENST00000463859 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
SRSF11-208ENST00000463859 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
SRSF11-208ENST00000463859 ZNF579Q8NAF0 562 aaKnown RBP16.42■□□□□ 0.22
SRSF11-208ENST00000463859 ZRANB1Q9UGI0 708 aa16.34■□□□□ 0.21
SRSF11-208ENST00000463859 DCBLD2Q96PD2 775 aa16.29■□□□□ 0.2
SRSF11-208ENST00000463859 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
SRSF11-208ENST00000463859 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
SRSF11-208ENST00000463859 GALR2O43603 387 aaPredicted RBP16.16■□□□□ 0.18
SRSF11-208ENST00000463859 MNX1P50219 401 aaPredicted RBP16.16■□□□□ 0.18
SRSF11-208ENST00000463859 PROM2Q8N271 834 aa16.08■□□□□ 0.16
SRSF11-208ENST00000463859 PHF12Q96QT6 1004 aa16.08■□□□□ 0.16
SRSF11-208ENST00000463859 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
SRSF11-208ENST00000463859 OTUD5Q96G74 571 aa15.88■□□□□ 0.13
SRSF11-208ENST00000463859 MS4A3Q96HJ5 214 aa15.88■□□□□ 0.13
SRSF11-208ENST00000463859 ASTLQ6HA08 431 aaPredicted RBP15.87■□□□□ 0.13
SRSF11-208ENST00000463859 PELP1Q8IZL8 1130 aaKnown RBP15.87■□□□□ 0.13
SRSF11-208ENST00000463859 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
SRSF11-208ENST00000463859 ATMINO43313 823 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms