RNA–Protein interactions for RNA: ENST00000463839.2

ITM2B-203, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-203ENST00000463839 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
ITM2B-203ENST00000463839 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
ITM2B-203ENST00000463839 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
ITM2B-203ENST00000463839 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
ITM2B-203ENST00000463839 FOXD1Q16676 465 aa21.81■■□□□ 1.08
ITM2B-203ENST00000463839 MSH5O43196 834 aa20.53■□□□□ 0.88
ITM2B-203ENST00000463839 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
ITM2B-203ENST00000463839 POTEDQ86YR6 584 aa20.43■□□□□ 0.86
ITM2B-203ENST00000463839 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
ITM2B-203ENST00000463839 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
ITM2B-203ENST00000463839 ADRA2BP18089 450 aa20.08■□□□□ 0.81
ITM2B-203ENST00000463839 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
ITM2B-203ENST00000463839 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
ITM2B-203ENST00000463839 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
ITM2B-203ENST00000463839 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
ITM2B-203ENST00000463839 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
ITM2B-203ENST00000463839 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
ITM2B-203ENST00000463839 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
ITM2B-203ENST00000463839 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
ITM2B-203ENST00000463839 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
ITM2B-203ENST00000463839 RNF39Q9H2S5 420 aa17.51■□□□□ 0.39
ITM2B-203ENST00000463839 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
ITM2B-203ENST00000463839 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
ITM2B-203ENST00000463839 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
ITM2B-203ENST00000463839 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
ITM2B-203ENST00000463839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
ITM2B-203ENST00000463839 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
ITM2B-203ENST00000463839 KCNA4P22459 653 aa16.31■□□□□ 0.2
ITM2B-203ENST00000463839 DSG3P32926 999 aa16.3■□□□□ 0.2
ITM2B-203ENST00000463839 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
ITM2B-203ENST00000463839 CAPN15O75808 1086 aa16.23■□□□□ 0.19
ITM2B-203ENST00000463839 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
ITM2B-203ENST00000463839 APLP2Q06481 763 aa16.01■□□□□ 0.15
ITM2B-203ENST00000463839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
ITM2B-203ENST00000463839 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
ITM2B-203ENST00000463839 POTEHQ6S545 545 aa15.95■□□□□ 0.14
ITM2B-203ENST00000463839 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
ITM2B-203ENST00000463839 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
ITM2B-203ENST00000463839 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
ITM2B-203ENST00000463839 ABCB7O75027 752 aa15.81■□□□□ 0.12
ITM2B-203ENST00000463839 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
ITM2B-203ENST00000463839 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
ITM2B-203ENST00000463839 POLA2Q14181 598 aa15.48■□□□□ 0.07
ITM2B-203ENST00000463839 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
ITM2B-203ENST00000463839 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
ITM2B-203ENST00000463839 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
ITM2B-203ENST00000463839 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
ITM2B-203ENST00000463839 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
ITM2B-203ENST00000463839 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
ITM2B-203ENST00000463839 ZBTB22O15209 634 aa15.01□□□□□ -0.01
ITM2B-203ENST00000463839 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
ITM2B-203ENST00000463839 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
ITM2B-203ENST00000463839 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
ITM2B-203ENST00000463839 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
ITM2B-203ENST00000463839 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
ITM2B-203ENST00000463839 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
ITM2B-203ENST00000463839 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.04
ITM2B-203ENST00000463839 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
ITM2B-203ENST00000463839 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
ITM2B-203ENST00000463839 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
ITM2B-203ENST00000463839 FBLN2P98095 1184 aa14.66□□□□□ -0.06
ITM2B-203ENST00000463839 HAX1O00165 279 aa14.61□□□□□ -0.07
ITM2B-203ENST00000463839 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
ITM2B-203ENST00000463839 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
ITM2B-203ENST00000463839 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
ITM2B-203ENST00000463839 EVX2Q03828 476 aa14.46□□□□□ -0.09
ITM2B-203ENST00000463839 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
ITM2B-203ENST00000463839 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
ITM2B-203ENST00000463839 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
ITM2B-203ENST00000463839 C19orf67A6NJJ6 358 aa14.32□□□□□ -0.12
ITM2B-203ENST00000463839 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
ITM2B-203ENST00000463839 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
ITM2B-203ENST00000463839 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
ITM2B-203ENST00000463839 GABBR2O75899 941 aa14.13□□□□□ -0.15
ITM2B-203ENST00000463839 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
ITM2B-203ENST00000463839 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
ITM2B-203ENST00000463839 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
ITM2B-203ENST00000463839 CLCN6P51797 869 aa13.93□□□□□ -0.18
ITM2B-203ENST00000463839 LHX8Q68G74 356 aa13.9□□□□□ -0.18
ITM2B-203ENST00000463839 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
ITM2B-203ENST00000463839 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
ITM2B-203ENST00000463839 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
ITM2B-203ENST00000463839 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
ITM2B-203ENST00000463839 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
ITM2B-203ENST00000463839 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
ITM2B-203ENST00000463839 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
ITM2B-203ENST00000463839 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
ITM2B-203ENST00000463839 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
ITM2B-203ENST00000463839 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
ITM2B-203ENST00000463839 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
ITM2B-203ENST00000463839 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
ITM2B-203ENST00000463839 PROM2Q8N271 834 aa13.47□□□□□ -0.25
ITM2B-203ENST00000463839 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
ITM2B-203ENST00000463839 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
ITM2B-203ENST00000463839 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
ITM2B-203ENST00000463839 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
ITM2B-203ENST00000463839 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
ITM2B-203ENST00000463839 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
ITM2B-203ENST00000463839 ATMINO43313 823 aaPredicted RBP13.26□□□□□ -0.29
ITM2B-203ENST00000463839 CCDC61Q9Y6R9 512 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms