RNA–Protein interactions for RNA: ENST00000463300.1

CLHC1-209, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-209ENST00000463300 AEBP2Q6ZN18 517 aaPredicted RBP24.17■■□□□ 1.46
CLHC1-209ENST00000463300 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
CLHC1-209ENST00000463300 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
CLHC1-209ENST00000463300 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
CLHC1-209ENST00000463300 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
CLHC1-209ENST00000463300 FOXD1Q16676 465 aa18.99■□□□□ 0.63
CLHC1-209ENST00000463300 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
CLHC1-209ENST00000463300 ADRA2BP18089 450 aa18.41■□□□□ 0.54
CLHC1-209ENST00000463300 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
CLHC1-209ENST00000463300 MSH5O43196 834 aa17.47■□□□□ 0.39
CLHC1-209ENST00000463300 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
CLHC1-209ENST00000463300 KCNA4P22459 653 aa16.97■□□□□ 0.31
CLHC1-209ENST00000463300 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
CLHC1-209ENST00000463300 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
CLHC1-209ENST00000463300 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
CLHC1-209ENST00000463300 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
CLHC1-209ENST00000463300 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
CLHC1-209ENST00000463300 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
CLHC1-209ENST00000463300 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
CLHC1-209ENST00000463300 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
CLHC1-209ENST00000463300 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
CLHC1-209ENST00000463300 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
CLHC1-209ENST00000463300 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
CLHC1-209ENST00000463300 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
CLHC1-209ENST00000463300 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
CLHC1-209ENST00000463300 ZBTB22O15209 634 aa15.6■□□□□ 0.09
CLHC1-209ENST00000463300 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
CLHC1-209ENST00000463300 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
CLHC1-209ENST00000463300 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
CLHC1-209ENST00000463300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLHC1-209ENST00000463300 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.04
CLHC1-209ENST00000463300 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
CLHC1-209ENST00000463300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
CLHC1-209ENST00000463300 HNRNPUL2Q1KMD3 747 aaKnown RBP15.08■□□□□ 0
CLHC1-209ENST00000463300 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
CLHC1-209ENST00000463300 SAMD1Q6SPF0 538 aaPredicted RBP15.01□□□□□ -0.01
CLHC1-209ENST00000463300 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
CLHC1-209ENST00000463300 APLP2Q06481 763 aa14.87□□□□□ -0.03
CLHC1-209ENST00000463300 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
CLHC1-209ENST00000463300 ATF5Q9Y2D1 282 aaPredicted RBP14.81□□□□□ -0.04
CLHC1-209ENST00000463300 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
CLHC1-209ENST00000463300 ZNF219Q9P2Y4 722 aaPredicted RBP14.6□□□□□ -0.07
CLHC1-209ENST00000463300 CAPN15O75808 1086 aa14.57□□□□□ -0.08
CLHC1-209ENST00000463300 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
CLHC1-209ENST00000463300 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
CLHC1-209ENST00000463300 POLA2Q14181 598 aa14.38□□□□□ -0.11
CLHC1-209ENST00000463300 DSG3P32926 999 aa14.31□□□□□ -0.12
CLHC1-209ENST00000463300 ABCB7O75027 752 aa14.29□□□□□ -0.12
CLHC1-209ENST00000463300 FBLN2P98095 1184 aa14.21□□□□□ -0.13
CLHC1-209ENST00000463300 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
CLHC1-209ENST00000463300 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
CLHC1-209ENST00000463300 FKBP8Q14318 412 aa14.16□□□□□ -0.14
CLHC1-209ENST00000463300 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
CLHC1-209ENST00000463300 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
CLHC1-209ENST00000463300 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
CLHC1-209ENST00000463300 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
CLHC1-209ENST00000463300 SPDYE2Q495Y8 402 aa13.83□□□□□ -0.2
CLHC1-209ENST00000463300 PROM2Q8N271 834 aa13.81□□□□□ -0.2
CLHC1-209ENST00000463300 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
CLHC1-209ENST00000463300 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
CLHC1-209ENST00000463300 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
CLHC1-209ENST00000463300 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
CLHC1-209ENST00000463300 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLHC1-209ENST00000463300 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
CLHC1-209ENST00000463300 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
CLHC1-209ENST00000463300 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
CLHC1-209ENST00000463300 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
CLHC1-209ENST00000463300 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
CLHC1-209ENST00000463300 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
CLHC1-209ENST00000463300 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
CLHC1-209ENST00000463300 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
CLHC1-209ENST00000463300 MIER1Q8N108 512 aa13.23□□□□□ -0.29
CLHC1-209ENST00000463300 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
CLHC1-209ENST00000463300 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
CLHC1-209ENST00000463300 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
CLHC1-209ENST00000463300 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
CLHC1-209ENST00000463300 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
CLHC1-209ENST00000463300 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
CLHC1-209ENST00000463300 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
CLHC1-209ENST00000463300 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
CLHC1-209ENST00000463300 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
CLHC1-209ENST00000463300 SLC24A1O60721 1099 aa13□□□□□ -0.33
CLHC1-209ENST00000463300 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
CLHC1-209ENST00000463300 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
CLHC1-209ENST00000463300 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLHC1-209ENST00000463300 PKD2Q13563 968 aa12.9□□□□□ -0.34
CLHC1-209ENST00000463300 NUBP1P53384 320 aa12.89□□□□□ -0.35
CLHC1-209ENST00000463300 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
CLHC1-209ENST00000463300 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLHC1-209ENST00000463300 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
CLHC1-209ENST00000463300 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
CLHC1-209ENST00000463300 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
CLHC1-209ENST00000463300 GSE1Q14687 1217 aa12.82□□□□□ -0.36
CLHC1-209ENST00000463300 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
CLHC1-209ENST00000463300 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
CLHC1-209ENST00000463300 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
CLHC1-209ENST00000463300 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
CLHC1-209ENST00000463300 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
CLHC1-209ENST00000463300 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
CLHC1-209ENST00000463300 RGL2O15211 777 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 256.2 ms