RNA–Protein interactions for RNA: ENST00000460872.1

ABCA9-203, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 635 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-203ENST00000460872 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
ABCA9-203ENST00000460872 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
ABCA9-203ENST00000460872 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
ABCA9-203ENST00000460872 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
ABCA9-203ENST00000460872 PLPPR3Q6T4P5 718 aa14.53□□□□□ -0.08
ABCA9-203ENST00000460872 FOXD1Q16676 465 aa13.97□□□□□ -0.17
ABCA9-203ENST00000460872 PPP6R1Q9UPN7 881 aa13.67□□□□□ -0.22
ABCA9-203ENST00000460872 ADRA2BP18089 450 aa13.66□□□□□ -0.22
ABCA9-203ENST00000460872 KCNA4P22459 653 aa13.27□□□□□ -0.29
ABCA9-203ENST00000460872 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
ABCA9-203ENST00000460872 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
ABCA9-203ENST00000460872 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
ABCA9-203ENST00000460872 MSH5O43196 834 aa12.73□□□□□ -0.37
ABCA9-203ENST00000460872 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
ABCA9-203ENST00000460872 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
ABCA9-203ENST00000460872 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
ABCA9-203ENST00000460872 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
ABCA9-203ENST00000460872 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
ABCA9-203ENST00000460872 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
ABCA9-203ENST00000460872 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
ABCA9-203ENST00000460872 NISCHQ9Y2I1 1504 aa12.31□□□□□ -0.44
ABCA9-203ENST00000460872 ZBTB22O15209 634 aa12.27□□□□□ -0.45
ABCA9-203ENST00000460872 DNAJC5BQ9UF47 199 aa12.14□□□□□ -0.47
ABCA9-203ENST00000460872 DMRT2Q9Y5R5 561 aa12.07□□□□□ -0.48
ABCA9-203ENST00000460872 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
ABCA9-203ENST00000460872 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
ABCA9-203ENST00000460872 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
ABCA9-203ENST00000460872 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
ABCA9-203ENST00000460872 MYCNP04198 464 aaPredicted RBP11.54□□□□□ -0.56
ABCA9-203ENST00000460872 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
ABCA9-203ENST00000460872 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
ABCA9-203ENST00000460872 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
ABCA9-203ENST00000460872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
ABCA9-203ENST00000460872 FKBP8Q14318 412 aa11.33□□□□□ -0.6
ABCA9-203ENST00000460872 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
ABCA9-203ENST00000460872 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
ABCA9-203ENST00000460872 U3KPZ7 1027 aaPredicted RBP11.22□□□□□ -0.61
ABCA9-203ENST00000460872 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
ABCA9-203ENST00000460872 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
ABCA9-203ENST00000460872 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
ABCA9-203ENST00000460872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.12□□□□□ -0.63
ABCA9-203ENST00000460872 HNRNPUL2Q1KMD3 747 aaKnown RBP11.12□□□□□ -0.63
ABCA9-203ENST00000460872 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
ABCA9-203ENST00000460872 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
ABCA9-203ENST00000460872 CCDC180Q9P1Z9 1646 aa10.95□□□□□ -0.66
ABCA9-203ENST00000460872 APLP2Q06481 763 aa10.93□□□□□ -0.66
ABCA9-203ENST00000460872 C1QBPQ07021 282 aaKnown RBP10.83□□□□□ -0.68
ABCA9-203ENST00000460872 SPINK5Q9NQ38 1064 aaPredicted RBP10.83□□□□□ -0.68
ABCA9-203ENST00000460872 MKRN4PQ13434 485 aaPredicted RBP10.81□□□□□ -0.68
ABCA9-203ENST00000460872 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.69
ABCA9-203ENST00000460872 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
ABCA9-203ENST00000460872 PROM2Q8N271 834 aa10.76□□□□□ -0.69
ABCA9-203ENST00000460872 CAPN15O75808 1086 aa10.74□□□□□ -0.69
ABCA9-203ENST00000460872 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
ABCA9-203ENST00000460872 POLA2Q14181 598 aa10.66□□□□□ -0.7
ABCA9-203ENST00000460872 FBLN2P98095 1184 aa10.64□□□□□ -0.71
ABCA9-203ENST00000460872 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
ABCA9-203ENST00000460872 ABCC9O60706 1549 aa10.59□□□□□ -0.71
ABCA9-203ENST00000460872 ABCB7O75027 752 aa10.58□□□□□ -0.72
ABCA9-203ENST00000460872 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
ABCA9-203ENST00000460872 DSG3P32926 999 aa10.53□□□□□ -0.72
ABCA9-203ENST00000460872 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
ABCA9-203ENST00000460872 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.73
ABCA9-203ENST00000460872 PLCB2Q00722 1185 aa10.45□□□□□ -0.74
ABCA9-203ENST00000460872 PKD2Q13563 968 aa10.43□□□□□ -0.74
ABCA9-203ENST00000460872 DCAF8L2P0C7V8 631 aa10.3□□□□□ -0.76
ABCA9-203ENST00000460872 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
ABCA9-203ENST00000460872 ZCCHC6Q5VYS8 1495 aaKnown RBP10.29□□□□□ -0.76
ABCA9-203ENST00000460872 ZNF692Q9BU19 519 aaPredicted RBP10.28□□□□□ -0.76
ABCA9-203ENST00000460872 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
ABCA9-203ENST00000460872 SPOCK2Q92563 424 aa10.27□□□□□ -0.77
ABCA9-203ENST00000460872 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
ABCA9-203ENST00000460872 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
ABCA9-203ENST00000460872 HAP1P54257 671 aaPredicted RBP10.25□□□□□ -0.77
ABCA9-203ENST00000460872 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
ABCA9-203ENST00000460872 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
ABCA9-203ENST00000460872 RB1CC1Q8TDY2 1594 aa10.23□□□□□ -0.77
ABCA9-203ENST00000460872 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
ABCA9-203ENST00000460872 NACADO15069 1562 aa10.21□□□□□ -0.78
ABCA9-203ENST00000460872 ECM2O94769 699 aaPredicted RBP10.18□□□□□ -0.78
ABCA9-203ENST00000460872 PABPN1Q86U42 306 aaKnown RBP eCLIP10.18□□□□□ -0.78
ABCA9-203ENST00000460872 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
ABCA9-203ENST00000460872 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
ABCA9-203ENST00000460872 DCAF1Q9Y4B6 1507 aa10.15□□□□□ -0.78
ABCA9-203ENST00000460872 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
ABCA9-203ENST00000460872 RGL2O15211 777 aa10.13□□□□□ -0.79
ABCA9-203ENST00000460872 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
ABCA9-203ENST00000460872 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
ABCA9-203ENST00000460872 MIER1Q8N108 512 aa10.1□□□□□ -0.79
ABCA9-203ENST00000460872 UNC13AQ9UPW8 1703 aa10.09□□□□□ -0.79
ABCA9-203ENST00000460872 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
ABCA9-203ENST00000460872 BCANQ96GW7 911 aa10.06□□□□□ -0.8
ABCA9-203ENST00000460872 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
ABCA9-203ENST00000460872 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
ABCA9-203ENST00000460872 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
ABCA9-203ENST00000460872 CFAP44Q96MT7 982 aa10□□□□□ -0.81
ABCA9-203ENST00000460872 ZBTB47Q9UFB7 747 aaPredicted RBP9.99□□□□□ -0.81
ABCA9-203ENST00000460872 CIZ1Q9ULV3 898 aaPredicted RBP9.99□□□□□ -0.81
ABCA9-203ENST00000460872 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
ABCA9-203ENST00000460872 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms