RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
SNORD42A-201ENST00000459584 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
SNORD42A-201ENST00000459584 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
SNORD42A-201ENST00000459584 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
SNORD42A-201ENST00000459584 FOXD1Q16676 465 aa16.85■□□□□ 0.29
SNORD42A-201ENST00000459584 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
SNORD42A-201ENST00000459584 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
SNORD42A-201ENST00000459584 ADRA2BP18089 450 aa16.17■□□□□ 0.18
SNORD42A-201ENST00000459584 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
SNORD42A-201ENST00000459584 MSH5O43196 834 aa15.5■□□□□ 0.07
SNORD42A-201ENST00000459584 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
SNORD42A-201ENST00000459584 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
SNORD42A-201ENST00000459584 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
SNORD42A-201ENST00000459584 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
SNORD42A-201ENST00000459584 KCNA4P22459 653 aa14.41□□□□□ -0.1
SNORD42A-201ENST00000459584 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
SNORD42A-201ENST00000459584 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
SNORD42A-201ENST00000459584 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
SNORD42A-201ENST00000459584 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
SNORD42A-201ENST00000459584 RNF216Q9NWF9 866 aaPredicted RBP14.12□□□□□ -0.15
SNORD42A-201ENST00000459584 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
SNORD42A-201ENST00000459584 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
SNORD42A-201ENST00000459584 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
SNORD42A-201ENST00000459584 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
SNORD42A-201ENST00000459584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNORD42A-201ENST00000459584 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
SNORD42A-201ENST00000459584 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
SNORD42A-201ENST00000459584 ZBTB22O15209 634 aa13.27□□□□□ -0.29
SNORD42A-201ENST00000459584 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
SNORD42A-201ENST00000459584 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
SNORD42A-201ENST00000459584 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
SNORD42A-201ENST00000459584 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
SNORD42A-201ENST00000459584 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
SNORD42A-201ENST00000459584 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
SNORD42A-201ENST00000459584 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
SNORD42A-201ENST00000459584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.33
SNORD42A-201ENST00000459584 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
SNORD42A-201ENST00000459584 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
SNORD42A-201ENST00000459584 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
SNORD42A-201ENST00000459584 CAPN15O75808 1086 aa12.87□□□□□ -0.35
SNORD42A-201ENST00000459584 APLP2Q06481 763 aa12.83□□□□□ -0.36
SNORD42A-201ENST00000459584 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
SNORD42A-201ENST00000459584 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
SNORD42A-201ENST00000459584 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
SNORD42A-201ENST00000459584 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
SNORD42A-201ENST00000459584 ABCB7O75027 752 aa12.65□□□□□ -0.38
SNORD42A-201ENST00000459584 DSG3P32926 999 aa12.65□□□□□ -0.38
SNORD42A-201ENST00000459584 POLA2Q14181 598 aa12.56□□□□□ -0.4
SNORD42A-201ENST00000459584 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
SNORD42A-201ENST00000459584 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
SNORD42A-201ENST00000459584 FBLN2P98095 1184 aa12.21□□□□□ -0.45
SNORD42A-201ENST00000459584 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
SNORD42A-201ENST00000459584 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
SNORD42A-201ENST00000459584 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
SNORD42A-201ENST00000459584 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
SNORD42A-201ENST00000459584 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
SNORD42A-201ENST00000459584 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
SNORD42A-201ENST00000459584 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
SNORD42A-201ENST00000459584 FKBP8Q14318 412 aa11.86□□□□□ -0.51
SNORD42A-201ENST00000459584 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
SNORD42A-201ENST00000459584 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
SNORD42A-201ENST00000459584 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
SNORD42A-201ENST00000459584 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
SNORD42A-201ENST00000459584 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
SNORD42A-201ENST00000459584 PROM2Q8N271 834 aa11.64□□□□□ -0.55
SNORD42A-201ENST00000459584 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
SNORD42A-201ENST00000459584 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
SNORD42A-201ENST00000459584 CHRDL2Q6WN34 429 aa11.58□□□□□ -0.56
SNORD42A-201ENST00000459584 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
SNORD42A-201ENST00000459584 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
SNORD42A-201ENST00000459584 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
SNORD42A-201ENST00000459584 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNORD42A-201ENST00000459584 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
SNORD42A-201ENST00000459584 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
SNORD42A-201ENST00000459584 PRKAR2AP13861 404 aaKnown RBP11.36□□□□□ -0.59
SNORD42A-201ENST00000459584 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
SNORD42A-201ENST00000459584 POTEHQ6S545 545 aa11.32□□□□□ -0.6
SNORD42A-201ENST00000459584 MIER1Q8N108 512 aa11.31□□□□□ -0.6
SNORD42A-201ENST00000459584 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
SNORD42A-201ENST00000459584 PLCD3Q8N3E9 789 aa11.27□□□□□ -0.61
SNORD42A-201ENST00000459584 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
SNORD42A-201ENST00000459584 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
SNORD42A-201ENST00000459584 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
SNORD42A-201ENST00000459584 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
SNORD42A-201ENST00000459584 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
SNORD42A-201ENST00000459584 HAX1O00165 279 aa11.11□□□□□ -0.63
SNORD42A-201ENST00000459584 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
SNORD42A-201ENST00000459584 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
SNORD42A-201ENST00000459584 EVX2Q03828 476 aa11.05□□□□□ -0.64
SNORD42A-201ENST00000459584 C19orf67A6NJJ6 358 aa11.04□□□□□ -0.64
SNORD42A-201ENST00000459584 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
SNORD42A-201ENST00000459584 NUBP1P53384 320 aa11.01□□□□□ -0.65
SNORD42A-201ENST00000459584 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
SNORD42A-201ENST00000459584 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
SNORD42A-201ENST00000459584 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
SNORD42A-201ENST00000459584 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
SNORD42A-201ENST00000459584 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
SNORD42A-201ENST00000459584 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
SNORD42A-201ENST00000459584 FAM212AQ96EL1 285 aa10.89□□□□□ -0.67
SNORD42A-201ENST00000459584 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms