RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 TROVE2P10155 538 aaKnown RBP eCLIP1.28□□□□□ -2.21e-323■□□□□ 9.8
SNORD42A-201ENST00000459584 NOLC1Q14978 699 aaKnown RBP eCLIP5.33□□□□□ -1.561e-260■■■■■ 134.4
SNORD42A-201ENST00000459584 SF3B4Q15427 424 aaKnown RBP eCLIP3.76□□□□□ -1.814e-64■■■■■ 26.8
SNORD42A-201ENST00000459584 DDX21Q9NR30 783 aaKnown RBP eCLIP4.41□□□□□ -1.71e-51■□□□□ 9
SNORD42A-201ENST00000459584 WDR43Q15061 677 aaKnown RBP eCLIP0.78□□□□□ -2.282e-48■■□□□ 14
SNORD42A-201ENST00000459584 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.312e-40■■■■■ 43.7
SNORD42A-201ENST00000459584 DKC1O60832 514 aaKnown RBP eCLIP2.77□□□□□ -1.973e-35■■■□□ 15.2
SNORD42A-201ENST00000459584 AATFQ9NY61 560 aaKnown RBP eCLIP2□□□□□ -2.091e-27■■□□□ 14.5
SNORD42A-201ENST00000459584 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.84□□□□□ -1.792e-27■■■□□ 17.5
SNORD42A-201ENST00000459584 PTBP1P26599 531 aaKnown RBP eCLIP2.41□□□□□ -2.022e-26■■■□□ 15.3
SNORD42A-201ENST00000459584 NIP7Q9Y221 180 aaKnown RBP eCLIP2.76□□□□□ -1.979e-26■■■■■ 165
SNORD42A-201ENST00000459584 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.71□□□□□ -1.342e-17■■■■■ 55.5
SNORD42A-201ENST00000459584 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.28□□□□□ -1.721e-14■■□□□ 13.7
SNORD42A-201ENST00000459584 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.41□□□□□ -1.385e-12■□□□□ 8.2
SNORD42A-201ENST00000459584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.71□□□□□ -1.821e-10■□□□□ 8.3
SNORD42A-201ENST00000459584 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.6□□□□□ -1.676e-8■■■■■ 56.8
SNORD42A-201ENST00000459584 NIPBLQ6KC79 2804 aaeCLIP-2.44□□□□□ -2.88e-8■■■■□ 23.8
SNORD42A-201ENST00000459584 TRA2AQ13595 282 aaKnown RBP eCLIP2.98□□□□□ -1.932e-7■■■■□ 21.5
SNORD42A-201ENST00000459584 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.63□□□□□ -1.673e-6■■□□□ 11.5
SNORD42A-201ENST00000459584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.33□□□□□ -2.24e-6■□□□□ 8.2
Retrieved 20 of 20 RNA–protein pairs in 6.6 ms