RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
CCDC144A-210ENST00000456009 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
CCDC144A-210ENST00000456009 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
CCDC144A-210ENST00000456009 ZCCHC6Q5VYS8 1495 aaKnown RBP31.04■■■□□ 2.56
CCDC144A-210ENST00000456009 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
CCDC144A-210ENST00000456009 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
CCDC144A-210ENST00000456009 DCAF1Q9Y4B6 1507 aa30.07■■■□□ 2.4
CCDC144A-210ENST00000456009 CHIC1Q5VXU3 224 aa29.85■■■□□ 2.37
CCDC144A-210ENST00000456009 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
CCDC144A-210ENST00000456009 SCRIBQ14160 1630 aa29.28■■■□□ 2.28
CCDC144A-210ENST00000456009 ABCC9O60706 1549 aa29.24■■■□□ 2.27
CCDC144A-210ENST00000456009 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
CCDC144A-210ENST00000456009 LOC105371045A0A1W2PR82 267 aa29.03■■■□□ 2.24
CCDC144A-210ENST00000456009 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
CCDC144A-210ENST00000456009 NACADO15069 1562 aa28.86■■■□□ 2.21
CCDC144A-210ENST00000456009 HRCP23327 699 aa28.78■■■□□ 2.2
CCDC144A-210ENST00000456009 RB1CC1Q8TDY2 1594 aa28.73■■■□□ 2.19
CCDC144A-210ENST00000456009 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
CCDC144A-210ENST00000456009 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
CCDC144A-210ENST00000456009 MROH2BQ7Z745 1585 aa28.59■■■□□ 2.17
CCDC144A-210ENST00000456009 WIZO95785 1651 aa28.42■■■□□ 2.14
CCDC144A-210ENST00000456009 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
CCDC144A-210ENST00000456009 PPARGC1BQ86YN6 1023 aaKnown RBP28.29■■■□□ 2.12
CCDC144A-210ENST00000456009 TRIM26Q12899 539 aaPredicted RBP28.29■■■□□ 2.12
CCDC144A-210ENST00000456009 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
CCDC144A-210ENST00000456009 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
CCDC144A-210ENST00000456009 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
CCDC144A-210ENST00000456009 EIF4G1Q04637 1599 aaKnown RBP27.96■■■□□ 2.07
CCDC144A-210ENST00000456009 SMARCA4P51532 1647 aa27.95■■■□□ 2.07
CCDC144A-210ENST00000456009 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
CCDC144A-210ENST00000456009 CCDC88BA6NC98 1476 aa27.88■■■□□ 2.05
CCDC144A-210ENST00000456009 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
CCDC144A-210ENST00000456009 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
CCDC144A-210ENST00000456009 ABCC8Q09428 1581 aa27.78■■■□□ 2.04
CCDC144A-210ENST00000456009 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.02
CCDC144A-210ENST00000456009 ZEB1P37275 1124 aaPredicted RBP27.56■■■□□ 2
CCDC144A-210ENST00000456009 SOGA1O94964 1423 aa27.55■■■□□ 2
CCDC144A-210ENST00000456009 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
CCDC144A-210ENST00000456009 PEG3Q9GZU2 1588 aa27.41■■□□□ 1.98
CCDC144A-210ENST00000456009 CSRNP3Q8WYN3 585 aa27.36■■□□□ 1.97
CCDC144A-210ENST00000456009 CEP162Q5TB80 1403 aa27.33■■□□□ 1.97
CCDC144A-210ENST00000456009 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
CCDC144A-210ENST00000456009 TNIKQ9UKE5 1360 aa27.29■■□□□ 1.96
CCDC144A-210ENST00000456009 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
CCDC144A-210ENST00000456009 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
CCDC144A-210ENST00000456009 EEA1Q15075 1411 aa27.26■■□□□ 1.95
CCDC144A-210ENST00000456009 UBTFP17480 764 aaKnown RBP27.25■■□□□ 1.95
CCDC144A-210ENST00000456009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
CCDC144A-210ENST00000456009 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
CCDC144A-210ENST00000456009 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
CCDC144A-210ENST00000456009 GOLGA3Q08378 1498 aa27.11■■□□□ 1.93
CCDC144A-210ENST00000456009 CCER1Q8TC90 406 aaPredicted RBP27.1■■□□□ 1.93
CCDC144A-210ENST00000456009 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
CCDC144A-210ENST00000456009 KIF21BO75037 1637 aa26.9■■□□□ 1.9
CCDC144A-210ENST00000456009 RAPGEF2Q9Y4G8 1499 aa26.85■■□□□ 1.89
CCDC144A-210ENST00000456009 CLIP1P30622 1438 aa26.83■■□□□ 1.89
CCDC144A-210ENST00000456009 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
CCDC144A-210ENST00000456009 RANGAP1P46060 587 aaPredicted RBP26.79■■□□□ 1.88
CCDC144A-210ENST00000456009 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
CCDC144A-210ENST00000456009 HMGXB3Q12766 1538 aa26.69■■□□□ 1.86
CCDC144A-210ENST00000456009 VPS8Q8N3P4 1428 aa26.69■■□□□ 1.86
CCDC144A-210ENST00000456009 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
CCDC144A-210ENST00000456009 HNRNPUL2Q1KMD3 747 aaKnown RBP26.64■■□□□ 1.86
CCDC144A-210ENST00000456009 CUX1P39880 1505 aa26.6■■□□□ 1.85
CCDC144A-210ENST00000456009 APLP2Q06481 763 aa26.57■■□□□ 1.84
CCDC144A-210ENST00000456009 PRXQ9BXM0 1461 aa26.57■■□□□ 1.84
CCDC144A-210ENST00000456009 CFTRP13569 1480 aa26.54■■□□□ 1.84
CCDC144A-210ENST00000456009 DIEXFQ68CQ4 756 aaKnown RBP26.53■■□□□ 1.84
CCDC144A-210ENST00000456009 SCAF1Q9H7N4 1312 aaKnown RBP26.5■■□□□ 1.83
CCDC144A-210ENST00000456009 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
CCDC144A-210ENST00000456009 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
CCDC144A-210ENST00000456009 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
CCDC144A-210ENST00000456009 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
CCDC144A-210ENST00000456009 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
CCDC144A-210ENST00000456009 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
CCDC144A-210ENST00000456009 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
CCDC144A-210ENST00000456009 ACIN1Q9UKV3 1341 aaKnown RBP26.25■■□□□ 1.79
CCDC144A-210ENST00000456009 IGF1RP08069 1367 aa26.23■■□□□ 1.79
CCDC144A-210ENST00000456009 CUX2O14529 1486 aa26.22■■□□□ 1.79
CCDC144A-210ENST00000456009 ARHGAP35Q9NRY4 1499 aa26.21■■□□□ 1.79
CCDC144A-210ENST00000456009 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
CCDC144A-210ENST00000456009 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
CCDC144A-210ENST00000456009 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
CCDC144A-210ENST00000456009 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
CCDC144A-210ENST00000456009 DHX57Q6P158 1386 aaKnown RBP26.08■■□□□ 1.76
CCDC144A-210ENST00000456009 RRBP1Q9P2E9 1410 aaKnown RBP26.07■■□□□ 1.76
CCDC144A-210ENST00000456009 CENPBP07199 599 aaPredicted RBP26.04■■□□□ 1.76
CCDC144A-210ENST00000456009 MIER1Q8N108 512 aa26.02■■□□□ 1.76
CCDC144A-210ENST00000456009 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
CCDC144A-210ENST00000456009 CCNB3Q8WWL7 1395 aa25.98■■□□□ 1.75
CCDC144A-210ENST00000456009 ITGAEP38570 1179 aa25.97■■□□□ 1.75
CCDC144A-210ENST00000456009 GTF3C3Q9Y5Q9 886 aa25.97■■□□□ 1.75
CCDC144A-210ENST00000456009 CLSPNQ9HAW4 1339 aa25.96■■□□□ 1.75
CCDC144A-210ENST00000456009 RAD54L2Q9Y4B4 1467 aa25.92■■□□□ 1.74
CCDC144A-210ENST00000456009 YTHDC1Q96MU7 727 aaKnown RBP25.92■■□□□ 1.74
CCDC144A-210ENST00000456009 P3H3Q8IVL6 736 aa25.92■■□□□ 1.74
CCDC144A-210ENST00000456009 NESP48681 1621 aa25.9■■□□□ 1.74
CCDC144A-210ENST00000456009 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
CCDC144A-210ENST00000456009 POLA1P09884 1462 aaPredicted RBP25.83■■□□□ 1.73
CCDC144A-210ENST00000456009 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 576.6 ms