RNA–Protein interactions for RNA: ENST00000455743.5

BARD1-204, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 5

Gene BARD1, Length 2,261 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-204ENST00000455743 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
BARD1-204ENST00000455743 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
BARD1-204ENST00000455743 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
BARD1-204ENST00000455743 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
BARD1-204ENST00000455743 SUPT5HO00267 1087 aaKnown RBP27.8■■■□□ 2.04
BARD1-204ENST00000455743 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
BARD1-204ENST00000455743 DCAF1Q9Y4B6 1507 aa27.12■■□□□ 1.93
BARD1-204ENST00000455743 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
BARD1-204ENST00000455743 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
BARD1-204ENST00000455743 HRCP23327 699 aa26.46■■□□□ 1.83
BARD1-204ENST00000455743 ABCC9O60706 1549 aa26.41■■□□□ 1.82
BARD1-204ENST00000455743 PCGF6Q9BYE7 350 aa26.37■■□□□ 1.81
BARD1-204ENST00000455743 LOC105371045A0A1W2PR82 267 aa26.31■■□□□ 1.8
BARD1-204ENST00000455743 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
BARD1-204ENST00000455743 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
BARD1-204ENST00000455743 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
BARD1-204ENST00000455743 NACADO15069 1562 aa25.9■■□□□ 1.74
BARD1-204ENST00000455743 PPARGC1BQ86YN6 1023 aaKnown RBP25.89■■□□□ 1.74
BARD1-204ENST00000455743 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
BARD1-204ENST00000455743 TRIM26Q12899 539 aaPredicted RBP25.86■■□□□ 1.73
BARD1-204ENST00000455743 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
BARD1-204ENST00000455743 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
BARD1-204ENST00000455743 FAM9AQ8IZU1 332 aaPredicted RBP25.68■■□□□ 1.7
BARD1-204ENST00000455743 WIZO95785 1651 aa25.59■■□□□ 1.69
BARD1-204ENST00000455743 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
BARD1-204ENST00000455743 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
BARD1-204ENST00000455743 ZEB1P37275 1124 aaPredicted RBP25.34■■□□□ 1.65
BARD1-204ENST00000455743 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
BARD1-204ENST00000455743 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
BARD1-204ENST00000455743 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
BARD1-204ENST00000455743 UNC13AQ9UPW8 1703 aa25.1■■□□□ 1.61
BARD1-204ENST00000455743 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
BARD1-204ENST00000455743 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
BARD1-204ENST00000455743 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
BARD1-204ENST00000455743 SOGA1O94964 1423 aa24.85■■□□□ 1.57
BARD1-204ENST00000455743 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
BARD1-204ENST00000455743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.8■■□□□ 1.56
BARD1-204ENST00000455743 WRNQ14191 1432 aaPredicted RBP eCLIP24.79■■□□□ 1.56
BARD1-204ENST00000455743 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
BARD1-204ENST00000455743 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
BARD1-204ENST00000455743 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
BARD1-204ENST00000455743 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
BARD1-204ENST00000455743 CCER1Q8TC90 406 aaPredicted RBP24.73■■□□□ 1.55
BARD1-204ENST00000455743 EEA1Q15075 1411 aa24.73■■□□□ 1.55
BARD1-204ENST00000455743 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
BARD1-204ENST00000455743 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
BARD1-204ENST00000455743 UBTFP17480 764 aaKnown RBP24.65■■□□□ 1.54
BARD1-204ENST00000455743 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
BARD1-204ENST00000455743 GOLGA3Q08378 1498 aa24.57■■□□□ 1.52
BARD1-204ENST00000455743 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
BARD1-204ENST00000455743 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
BARD1-204ENST00000455743 SCAF1Q9H7N4 1312 aaKnown RBP24.44■■□□□ 1.5
BARD1-204ENST00000455743 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
BARD1-204ENST00000455743 BAZ1BQ9UIG0 1483 aaKnown RBP24.41■■□□□ 1.5
BARD1-204ENST00000455743 KIF21BO75037 1637 aa24.39■■□□□ 1.49
BARD1-204ENST00000455743 DIEXFQ68CQ4 756 aaKnown RBP24.32■■□□□ 1.48
BARD1-204ENST00000455743 CLIP1P30622 1438 aa24.3■■□□□ 1.48
BARD1-204ENST00000455743 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
BARD1-204ENST00000455743 VPS8Q8N3P4 1428 aa24.2■■□□□ 1.47
BARD1-204ENST00000455743 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
BARD1-204ENST00000455743 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
BARD1-204ENST00000455743 HNRNPUL2Q1KMD3 747 aaKnown RBP24.17■■□□□ 1.46
BARD1-204ENST00000455743 NEUROD1Q13562 356 aa24.15■■□□□ 1.46
BARD1-204ENST00000455743 APLP2Q06481 763 aa24.13■■□□□ 1.45
BARD1-204ENST00000455743 ZNF316A6NFI3 1004 aaPredicted RBP24.12■■□□□ 1.45
BARD1-204ENST00000455743 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
BARD1-204ENST00000455743 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
BARD1-204ENST00000455743 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
BARD1-204ENST00000455743 PELP1Q8IZL8 1130 aaKnown RBP24.04■■□□□ 1.44
BARD1-204ENST00000455743 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
BARD1-204ENST00000455743 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
BARD1-204ENST00000455743 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
BARD1-204ENST00000455743 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
BARD1-204ENST00000455743 HMGXB3Q12766 1538 aa23.97■■□□□ 1.43
BARD1-204ENST00000455743 CUX1P39880 1505 aa23.92■■□□□ 1.42
BARD1-204ENST00000455743 GTF3C3Q9Y5Q9 886 aa23.91■■□□□ 1.42
BARD1-204ENST00000455743 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
BARD1-204ENST00000455743 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
BARD1-204ENST00000455743 CFTRP13569 1480 aa23.83■■□□□ 1.4
BARD1-204ENST00000455743 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
BARD1-204ENST00000455743 MIER1Q8N108 512 aa23.79■■□□□ 1.4
BARD1-204ENST00000455743 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
BARD1-204ENST00000455743 DHX57Q6P158 1386 aaKnown RBP23.71■■□□□ 1.39
BARD1-204ENST00000455743 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
BARD1-204ENST00000455743 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
BARD1-204ENST00000455743 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
BARD1-204ENST00000455743 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
BARD1-204ENST00000455743 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
BARD1-204ENST00000455743 IGF1RP08069 1367 aa23.59■■□□□ 1.37
BARD1-204ENST00000455743 CUX2O14529 1486 aa23.59■■□□□ 1.37
BARD1-204ENST00000455743 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
BARD1-204ENST00000455743 CADPSQ9ULU8 1353 aa23.54■■□□□ 1.36
BARD1-204ENST00000455743 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
BARD1-204ENST00000455743 ITGAEP38570 1179 aa23.48■■□□□ 1.35
BARD1-204ENST00000455743 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
BARD1-204ENST00000455743 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
BARD1-204ENST00000455743 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
BARD1-204ENST00000455743 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
BARD1-204ENST00000455743 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
BARD1-204ENST00000455743 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms