RNA–Protein interactions for RNA: ENST00000455540.2

CYCSP53-201, Transcript of cytochrome c, somatic pseudogene 53, humanhuman

BASIC

Gene CYCSP53, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP53-201ENST00000455540 AEBP2Q6ZN18 517 aaPredicted RBP29.85■■■□□ 2.37
CYCSP53-201ENST00000455540 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
CYCSP53-201ENST00000455540 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
CYCSP53-201ENST00000455540 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
CYCSP53-201ENST00000455540 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
CYCSP53-201ENST00000455540 FOXD1Q16676 465 aa23.53■■□□□ 1.36
CYCSP53-201ENST00000455540 ADRA2BP18089 450 aa22.67■■□□□ 1.22
CYCSP53-201ENST00000455540 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
CYCSP53-201ENST00000455540 PIAS4Q8N2W9 510 aaPredicted RBP22.26■■□□□ 1.15
CYCSP53-201ENST00000455540 MSH5O43196 834 aa21.82■■□□□ 1.08
CYCSP53-201ENST00000455540 PPP4R3CPQ6ZMV5 832 aa21.08■□□□□ 0.97
CYCSP53-201ENST00000455540 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
CYCSP53-201ENST00000455540 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
CYCSP53-201ENST00000455540 KCNA4P22459 653 aa20.63■□□□□ 0.89
CYCSP53-201ENST00000455540 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
CYCSP53-201ENST00000455540 MAPK8IP2Q13387 824 aaPredicted RBP20.51■□□□□ 0.87
CYCSP53-201ENST00000455540 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
CYCSP53-201ENST00000455540 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
CYCSP53-201ENST00000455540 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
CYCSP53-201ENST00000455540 HOXD11P31277 338 aaPredicted RBP19.98■□□□□ 0.79
CYCSP53-201ENST00000455540 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
CYCSP53-201ENST00000455540 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
CYCSP53-201ENST00000455540 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
CYCSP53-201ENST00000455540 DCAF8L1A6NGE4 600 aa19.41■□□□□ 0.7
CYCSP53-201ENST00000455540 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
CYCSP53-201ENST00000455540 FOXD4L1Q9NU39 408 aa19.06■□□□□ 0.64
CYCSP53-201ENST00000455540 SLC4A2P04920 1241 aa19.04■□□□□ 0.64
CYCSP53-201ENST00000455540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
CYCSP53-201ENST00000455540 CSRNP3Q8WYN3 585 aa18.98■□□□□ 0.63
CYCSP53-201ENST00000455540 ZBTB22O15209 634 aa18.91■□□□□ 0.62
CYCSP53-201ENST00000455540 MYCNP04198 464 aaPredicted RBP18.77■□□□□ 0.6
CYCSP53-201ENST00000455540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.69■□□□□ 0.58
CYCSP53-201ENST00000455540 HNRNPUL2Q1KMD3 747 aaKnown RBP18.69■□□□□ 0.58
CYCSP53-201ENST00000455540 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
CYCSP53-201ENST00000455540 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
CYCSP53-201ENST00000455540 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
CYCSP53-201ENST00000455540 APLP2Q06481 763 aa18.5■□□□□ 0.55
CYCSP53-201ENST00000455540 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
CYCSP53-201ENST00000455540 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
CYCSP53-201ENST00000455540 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
CYCSP53-201ENST00000455540 CAPN15O75808 1086 aa18.08■□□□□ 0.48
CYCSP53-201ENST00000455540 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
CYCSP53-201ENST00000455540 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
CYCSP53-201ENST00000455540 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
CYCSP53-201ENST00000455540 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
CYCSP53-201ENST00000455540 POLA2Q14181 598 aa17.75■□□□□ 0.43
CYCSP53-201ENST00000455540 DSG3P32926 999 aa17.73■□□□□ 0.43
CYCSP53-201ENST00000455540 ABCB7O75027 752 aa17.65■□□□□ 0.42
CYCSP53-201ENST00000455540 ZBTB12Q9Y330 459 aaPredicted RBP17.62■□□□□ 0.41
CYCSP53-201ENST00000455540 FBLN2P98095 1184 aa17.55■□□□□ 0.4
CYCSP53-201ENST00000455540 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
CYCSP53-201ENST00000455540 FKBP8Q14318 412 aa17.17■□□□□ 0.34
CYCSP53-201ENST00000455540 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
CYCSP53-201ENST00000455540 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
CYCSP53-201ENST00000455540 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
CYCSP53-201ENST00000455540 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
CYCSP53-201ENST00000455540 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
CYCSP53-201ENST00000455540 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
CYCSP53-201ENST00000455540 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
CYCSP53-201ENST00000455540 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
CYCSP53-201ENST00000455540 PROM2Q8N271 834 aa16.83■□□□□ 0.28
CYCSP53-201ENST00000455540 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
CYCSP53-201ENST00000455540 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
CYCSP53-201ENST00000455540 FBXO3Q9UK99 471 aa16.72■□□□□ 0.27
CYCSP53-201ENST00000455540 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
CYCSP53-201ENST00000455540 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
CYCSP53-201ENST00000455540 SPDYE1Q8NFV5 336 aaPredicted RBP16.57■□□□□ 0.24
CYCSP53-201ENST00000455540 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
CYCSP53-201ENST00000455540 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
CYCSP53-201ENST00000455540 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
CYCSP53-201ENST00000455540 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
CYCSP53-201ENST00000455540 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
CYCSP53-201ENST00000455540 MIER1Q8N108 512 aa16.24■□□□□ 0.19
CYCSP53-201ENST00000455540 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
CYCSP53-201ENST00000455540 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
CYCSP53-201ENST00000455540 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
CYCSP53-201ENST00000455540 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
CYCSP53-201ENST00000455540 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
CYCSP53-201ENST00000455540 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
CYCSP53-201ENST00000455540 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
CYCSP53-201ENST00000455540 SPOCK2Q92563 424 aa15.97■□□□□ 0.15
CYCSP53-201ENST00000455540 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
CYCSP53-201ENST00000455540 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
CYCSP53-201ENST00000455540 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
CYCSP53-201ENST00000455540 AMER1Q5JTC6 1135 aaPredicted RBP15.94■□□□□ 0.14
CYCSP53-201ENST00000455540 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
CYCSP53-201ENST00000455540 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
CYCSP53-201ENST00000455540 FARP1Q9Y4F1 1045 aaPredicted RBP15.87■□□□□ 0.13
CYCSP53-201ENST00000455540 NUBP1P53384 320 aa15.75■□□□□ 0.11
CYCSP53-201ENST00000455540 GSE1Q14687 1217 aa15.73■□□□□ 0.11
CYCSP53-201ENST00000455540 RTN4Q9NQC3 1192 aaKnown RBP15.72■□□□□ 0.11
CYCSP53-201ENST00000455540 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
CYCSP53-201ENST00000455540 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
CYCSP53-201ENST00000455540 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
CYCSP53-201ENST00000455540 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
CYCSP53-201ENST00000455540 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
CYCSP53-201ENST00000455540 RASEFQ8IZ41 740 aa15.62■□□□□ 0.09
CYCSP53-201ENST00000455540 PKD2Q13563 968 aa15.57■□□□□ 0.08
CYCSP53-201ENST00000455540 POTEHQ6S545 545 aa15.53■□□□□ 0.08
CYCSP53-201ENST00000455540 TSPYL2Q9H2G4 693 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms