RNA–Protein interactions for RNA: ENST00000455171.6

CHTF18-205, Transcript of chromosome transmission fidelity factor 18, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CHTF18, Length 3,172 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-205ENST00000455171 NISCHQ9Y2I1 1504 aa32.52■■■□□ 2.8
CHTF18-205ENST00000455171 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
CHTF18-205ENST00000455171 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
CHTF18-205ENST00000455171 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
CHTF18-205ENST00000455171 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.97
CHTF18-205ENST00000455171 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
CHTF18-205ENST00000455171 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
CHTF18-205ENST00000455171 ABCC9O60706 1549 aa26.28■■□□□ 1.8
CHTF18-205ENST00000455171 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
CHTF18-205ENST00000455171 SCRIBQ14160 1630 aa26.14■■□□□ 1.78
CHTF18-205ENST00000455171 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
CHTF18-205ENST00000455171 NACADO15069 1562 aa25.7■■□□□ 1.7
CHTF18-205ENST00000455171 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.7
CHTF18-205ENST00000455171 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
CHTF18-205ENST00000455171 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
CHTF18-205ENST00000455171 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
CHTF18-205ENST00000455171 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
CHTF18-205ENST00000455171 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
CHTF18-205ENST00000455171 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
CHTF18-205ENST00000455171 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
CHTF18-205ENST00000455171 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
CHTF18-205ENST00000455171 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.637e-7■■■■■ 33
CHTF18-205ENST00000455171 WIZO95785 1651 aa25.18■■□□□ 1.62
CHTF18-205ENST00000455171 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
CHTF18-205ENST00000455171 HRCP23327 699 aa24.9■■□□□ 1.58
CHTF18-205ENST00000455171 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.58
CHTF18-205ENST00000455171 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
CHTF18-205ENST00000455171 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
CHTF18-205ENST00000455171 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
CHTF18-205ENST00000455171 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
CHTF18-205ENST00000455171 PPARGC1BQ86YN6 1023 aaKnown RBP24.66■■□□□ 1.54
CHTF18-205ENST00000455171 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
CHTF18-205ENST00000455171 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
CHTF18-205ENST00000455171 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
CHTF18-205ENST00000455171 EIF4G1Q04637 1599 aaKnown RBP24.44■■□□□ 1.5
CHTF18-205ENST00000455171 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
CHTF18-205ENST00000455171 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
CHTF18-205ENST00000455171 SOGA1O94964 1423 aa24.35■■□□□ 1.49
CHTF18-205ENST00000455171 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
CHTF18-205ENST00000455171 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
CHTF18-205ENST00000455171 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
CHTF18-205ENST00000455171 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
CHTF18-205ENST00000455171 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
CHTF18-205ENST00000455171 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
CHTF18-205ENST00000455171 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
CHTF18-205ENST00000455171 CEP162Q5TB80 1403 aa24.08■■□□□ 1.45
CHTF18-205ENST00000455171 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
CHTF18-205ENST00000455171 EEA1Q15075 1411 aa24.01■■□□□ 1.43
CHTF18-205ENST00000455171 SYNJ1O43426 1573 aa24■■□□□ 1.43
CHTF18-205ENST00000455171 TNIKQ9UKE5 1360 aa24■■□□□ 1.43
CHTF18-205ENST00000455171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
CHTF18-205ENST00000455171 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
CHTF18-205ENST00000455171 CCER1Q8TC90 406 aaPredicted RBP23.92■■□□□ 1.42
CHTF18-205ENST00000455171 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
CHTF18-205ENST00000455171 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
CHTF18-205ENST00000455171 APLP2Q06481 763 aa23.77■■□□□ 1.39
CHTF18-205ENST00000455171 CLIP1P30622 1438 aa23.74■■□□□ 1.39
CHTF18-205ENST00000455171 RAPGEF2Q9Y4G8 1499 aa23.73■■□□□ 1.39
CHTF18-205ENST00000455171 HMGXB3Q12766 1538 aa23.71■■□□□ 1.39
CHTF18-205ENST00000455171 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
CHTF18-205ENST00000455171 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
CHTF18-205ENST00000455171 KIF21BO75037 1637 aa23.62■■□□□ 1.37
CHTF18-205ENST00000455171 CUX1P39880 1505 aa23.58■■□□□ 1.37
CHTF18-205ENST00000455171 CFTRP13569 1480 aa23.57■■□□□ 1.36
CHTF18-205ENST00000455171 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
CHTF18-205ENST00000455171 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
CHTF18-205ENST00000455171 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
CHTF18-205ENST00000455171 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
CHTF18-205ENST00000455171 CC2D2AQ9P2K1 1620 aa23.46■■□□□ 1.35
CHTF18-205ENST00000455171 CUX2O14529 1486 aa23.41■■□□□ 1.34
CHTF18-205ENST00000455171 PRXQ9BXM0 1461 aa23.4■■□□□ 1.34
CHTF18-205ENST00000455171 KANK4Q5T7N3 995 aaPredicted RBP23.31■■□□□ 1.32
CHTF18-205ENST00000455171 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
CHTF18-205ENST00000455171 ERICH3Q5RHP9 1530 aa23.3■■□□□ 1.32
CHTF18-205ENST00000455171 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
CHTF18-205ENST00000455171 FGD5Q6ZNL6 1462 aa23.29■■□□□ 1.32
CHTF18-205ENST00000455171 IGF1RP08069 1367 aa23.26■■□□□ 1.31
CHTF18-205ENST00000455171 FANCD2Q9BXW9 1451 aa23.26■■□□□ 1.31
CHTF18-205ENST00000455171 NESP48681 1621 aa23.26■■□□□ 1.31
CHTF18-205ENST00000455171 ITGAEP38570 1179 aa23.26■■□□□ 1.31
CHTF18-205ENST00000455171 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
CHTF18-205ENST00000455171 CARMIL1Q5VZK9 1371 aa23.23■■□□□ 1.31
CHTF18-205ENST00000455171 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
CHTF18-205ENST00000455171 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
CHTF18-205ENST00000455171 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
CHTF18-205ENST00000455171 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
CHTF18-205ENST00000455171 ARHGAP35Q9NRY4 1499 aa23.13■■□□□ 1.29
CHTF18-205ENST00000455171 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
CHTF18-205ENST00000455171 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
CHTF18-205ENST00000455171 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
CHTF18-205ENST00000455171 TDRD9Q8NDG6 1382 aaKnown RBP23■■□□□ 1.27
CHTF18-205ENST00000455171 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
CHTF18-205ENST00000455171 FAM50AQ14320 339 aaKnown RBP22.96■■□□□ 1.27
CHTF18-205ENST00000455171 CCNB3Q8WWL7 1395 aa22.92■■□□□ 1.26
CHTF18-205ENST00000455171 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
CHTF18-205ENST00000455171 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
CHTF18-205ENST00000455171 URB2Q14146 1524 aaKnown RBP22.88■■□□□ 1.25
CHTF18-205ENST00000455171 PDS5BQ9NTI5 1447 aa22.87■■□□□ 1.25
CHTF18-205ENST00000455171 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
CHTF18-205ENST00000455171 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms