RNA–Protein interactions for RNA: ENST00000454883.1

NDUFAF4P4-201, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 4, humanhuman

BASIC

Gene NDUFAF4P4, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF4P4-201ENST00000454883 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
NDUFAF4P4-201ENST00000454883 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
NDUFAF4P4-201ENST00000454883 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
NDUFAF4P4-201ENST00000454883 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
NDUFAF4P4-201ENST00000454883 FOXD1Q16676 465 aa21.84■■□□□ 1.09
NDUFAF4P4-201ENST00000454883 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
NDUFAF4P4-201ENST00000454883 MSH5O43196 834 aa20.56■□□□□ 0.88
NDUFAF4P4-201ENST00000454883 PIAS4Q8N2W9 510 aaPredicted RBP20.52■□□□□ 0.88
NDUFAF4P4-201ENST00000454883 ADRA2BP18089 450 aa20.39■□□□□ 0.85
NDUFAF4P4-201ENST00000454883 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
NDUFAF4P4-201ENST00000454883 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
NDUFAF4P4-201ENST00000454883 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
NDUFAF4P4-201ENST00000454883 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
NDUFAF4P4-201ENST00000454883 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
NDUFAF4P4-201ENST00000454883 PPP4R3CPQ6ZMV5 832 aa18.41■□□□□ 0.54
NDUFAF4P4-201ENST00000454883 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
NDUFAF4P4-201ENST00000454883 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
NDUFAF4P4-201ENST00000454883 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
NDUFAF4P4-201ENST00000454883 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
NDUFAF4P4-201ENST00000454883 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
NDUFAF4P4-201ENST00000454883 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
NDUFAF4P4-201ENST00000454883 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
NDUFAF4P4-201ENST00000454883 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
NDUFAF4P4-201ENST00000454883 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
NDUFAF4P4-201ENST00000454883 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
NDUFAF4P4-201ENST00000454883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
NDUFAF4P4-201ENST00000454883 KCNA4P22459 653 aa17.15■□□□□ 0.34
NDUFAF4P4-201ENST00000454883 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
NDUFAF4P4-201ENST00000454883 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
NDUFAF4P4-201ENST00000454883 CAPN15O75808 1086 aa16.55■□□□□ 0.24
NDUFAF4P4-201ENST00000454883 APLP2Q06481 763 aa16.54■□□□□ 0.24
NDUFAF4P4-201ENST00000454883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
NDUFAF4P4-201ENST00000454883 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
NDUFAF4P4-201ENST00000454883 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
NDUFAF4P4-201ENST00000454883 DSG3P32926 999 aa16.36■□□□□ 0.21
NDUFAF4P4-201ENST00000454883 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
NDUFAF4P4-201ENST00000454883 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
NDUFAF4P4-201ENST00000454883 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
NDUFAF4P4-201ENST00000454883 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
NDUFAF4P4-201ENST00000454883 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
NDUFAF4P4-201ENST00000454883 ABCB7O75027 752 aa16.11■□□□□ 0.17
NDUFAF4P4-201ENST00000454883 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
NDUFAF4P4-201ENST00000454883 POLA2Q14181 598 aa15.83■□□□□ 0.12
NDUFAF4P4-201ENST00000454883 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
NDUFAF4P4-201ENST00000454883 ZBTB22O15209 634 aa15.69■□□□□ 0.1
NDUFAF4P4-201ENST00000454883 ZBTB12Q9Y330 459 aaPredicted RBP15.67■□□□□ 0.1
NDUFAF4P4-201ENST00000454883 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
NDUFAF4P4-201ENST00000454883 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
NDUFAF4P4-201ENST00000454883 POTEHQ6S545 545 aa15.59■□□□□ 0.09
NDUFAF4P4-201ENST00000454883 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
NDUFAF4P4-201ENST00000454883 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
NDUFAF4P4-201ENST00000454883 FBLN2P98095 1184 aa15.29■□□□□ 0.04
NDUFAF4P4-201ENST00000454883 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
NDUFAF4P4-201ENST00000454883 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
NDUFAF4P4-201ENST00000454883 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
NDUFAF4P4-201ENST00000454883 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
NDUFAF4P4-201ENST00000454883 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
NDUFAF4P4-201ENST00000454883 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
NDUFAF4P4-201ENST00000454883 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
NDUFAF4P4-201ENST00000454883 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
NDUFAF4P4-201ENST00000454883 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
NDUFAF4P4-201ENST00000454883 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
NDUFAF4P4-201ENST00000454883 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
NDUFAF4P4-201ENST00000454883 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
NDUFAF4P4-201ENST00000454883 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
NDUFAF4P4-201ENST00000454883 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
NDUFAF4P4-201ENST00000454883 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
NDUFAF4P4-201ENST00000454883 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
NDUFAF4P4-201ENST00000454883 HAX1O00165 279 aa14.67□□□□□ -0.06
NDUFAF4P4-201ENST00000454883 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
NDUFAF4P4-201ENST00000454883 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
NDUFAF4P4-201ENST00000454883 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
NDUFAF4P4-201ENST00000454883 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
NDUFAF4P4-201ENST00000454883 CHADLQ6NUI6 762 aa14.41□□□□□ -0.1
NDUFAF4P4-201ENST00000454883 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
NDUFAF4P4-201ENST00000454883 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
NDUFAF4P4-201ENST00000454883 EVX2Q03828 476 aa14.32□□□□□ -0.12
NDUFAF4P4-201ENST00000454883 FARP1Q9Y4F1 1045 aaPredicted RBP14.26□□□□□ -0.13
NDUFAF4P4-201ENST00000454883 CD44P16070 742 aaKnown RBP14.19□□□□□ -0.14
NDUFAF4P4-201ENST00000454883 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
NDUFAF4P4-201ENST00000454883 GABBR2O75899 941 aa14.12□□□□□ -0.15
NDUFAF4P4-201ENST00000454883 CLCN6P51797 869 aa14.08□□□□□ -0.16
NDUFAF4P4-201ENST00000454883 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
NDUFAF4P4-201ENST00000454883 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
NDUFAF4P4-201ENST00000454883 PROM2Q8N271 834 aa14.02□□□□□ -0.17
NDUFAF4P4-201ENST00000454883 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
NDUFAF4P4-201ENST00000454883 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.17
NDUFAF4P4-201ENST00000454883 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
NDUFAF4P4-201ENST00000454883 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
NDUFAF4P4-201ENST00000454883 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
NDUFAF4P4-201ENST00000454883 MIER1Q8N108 512 aa13.77□□□□□ -0.21
NDUFAF4P4-201ENST00000454883 FKBP8Q14318 412 aa13.76□□□□□ -0.21
NDUFAF4P4-201ENST00000454883 LHX8Q68G74 356 aa13.75□□□□□ -0.21
NDUFAF4P4-201ENST00000454883 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
NDUFAF4P4-201ENST00000454883 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
NDUFAF4P4-201ENST00000454883 GALR2O43603 387 aaPredicted RBP13.72□□□□□ -0.21
NDUFAF4P4-201ENST00000454883 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.21
NDUFAF4P4-201ENST00000454883 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
NDUFAF4P4-201ENST00000454883 ZBTB47Q9UFB7 747 aaPredicted RBP13.68□□□□□ -0.22
NDUFAF4P4-201ENST00000454883 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms