RNA–Protein interactions for RNA: ENST00000454702.2

CCNB1IP1P3-201, Transcript of cyclin B1 interacting protein 1 pseudogene 3, humanhuman

BASIC

Gene CCNB1IP1P3, Length 829 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1P3-201ENST00000454702 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
CCNB1IP1P3-201ENST00000454702 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
CCNB1IP1P3-201ENST00000454702 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
CCNB1IP1P3-201ENST00000454702 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
CCNB1IP1P3-201ENST00000454702 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
CCNB1IP1P3-201ENST00000454702 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
CCNB1IP1P3-201ENST00000454702 FOXD1Q16676 465 aa17.41■□□□□ 0.38
CCNB1IP1P3-201ENST00000454702 MSH5O43196 834 aa16.54■□□□□ 0.24
CCNB1IP1P3-201ENST00000454702 ADRA2BP18089 450 aa16.5■□□□□ 0.23
CCNB1IP1P3-201ENST00000454702 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
CCNB1IP1P3-201ENST00000454702 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
CCNB1IP1P3-201ENST00000454702 KCNA4P22459 653 aa15.6■□□□□ 0.09
CCNB1IP1P3-201ENST00000454702 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CCNB1IP1P3-201ENST00000454702 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
CCNB1IP1P3-201ENST00000454702 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
CCNB1IP1P3-201ENST00000454702 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
CCNB1IP1P3-201ENST00000454702 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
CCNB1IP1P3-201ENST00000454702 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
CCNB1IP1P3-201ENST00000454702 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
CCNB1IP1P3-201ENST00000454702 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
CCNB1IP1P3-201ENST00000454702 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
CCNB1IP1P3-201ENST00000454702 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
CCNB1IP1P3-201ENST00000454702 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
CCNB1IP1P3-201ENST00000454702 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
CCNB1IP1P3-201ENST00000454702 ZBTB22O15209 634 aa14.4□□□□□ -0.1
CCNB1IP1P3-201ENST00000454702 DNAJC5BQ9UF47 199 aa14.4□□□□□ -0.1
CCNB1IP1P3-201ENST00000454702 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
CCNB1IP1P3-201ENST00000454702 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
CCNB1IP1P3-201ENST00000454702 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
CCNB1IP1P3-201ENST00000454702 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
CCNB1IP1P3-201ENST00000454702 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
CCNB1IP1P3-201ENST00000454702 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
CCNB1IP1P3-201ENST00000454702 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
CCNB1IP1P3-201ENST00000454702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCNB1IP1P3-201ENST00000454702 POTEHQ6S545 545 aa13.67□□□□□ -0.22
CCNB1IP1P3-201ENST00000454702 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
CCNB1IP1P3-201ENST00000454702 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
CCNB1IP1P3-201ENST00000454702 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
CCNB1IP1P3-201ENST00000454702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
CCNB1IP1P3-201ENST00000454702 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
CCNB1IP1P3-201ENST00000454702 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
CCNB1IP1P3-201ENST00000454702 APLP2Q06481 763 aa13.17□□□□□ -0.3
CCNB1IP1P3-201ENST00000454702 FKBP8Q14318 412 aa13.16□□□□□ -0.3
CCNB1IP1P3-201ENST00000454702 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
CCNB1IP1P3-201ENST00000454702 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
CCNB1IP1P3-201ENST00000454702 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
CCNB1IP1P3-201ENST00000454702 CAPN15O75808 1086 aa12.97□□□□□ -0.33
CCNB1IP1P3-201ENST00000454702 DSG3P32926 999 aa12.91□□□□□ -0.34
CCNB1IP1P3-201ENST00000454702 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
CCNB1IP1P3-201ENST00000454702 POLA2Q14181 598 aa12.88□□□□□ -0.35
CCNB1IP1P3-201ENST00000454702 ABCB7O75027 752 aa12.8□□□□□ -0.36
CCNB1IP1P3-201ENST00000454702 FBLN2P98095 1184 aa12.77□□□□□ -0.37
CCNB1IP1P3-201ENST00000454702 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
CCNB1IP1P3-201ENST00000454702 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
CCNB1IP1P3-201ENST00000454702 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
CCNB1IP1P3-201ENST00000454702 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
CCNB1IP1P3-201ENST00000454702 PROM2Q8N271 834 aa12.6□□□□□ -0.39
CCNB1IP1P3-201ENST00000454702 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
CCNB1IP1P3-201ENST00000454702 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
CCNB1IP1P3-201ENST00000454702 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
CCNB1IP1P3-201ENST00000454702 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
CCNB1IP1P3-201ENST00000454702 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
CCNB1IP1P3-201ENST00000454702 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
CCNB1IP1P3-201ENST00000454702 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
CCNB1IP1P3-201ENST00000454702 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
CCNB1IP1P3-201ENST00000454702 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
CCNB1IP1P3-201ENST00000454702 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
CCNB1IP1P3-201ENST00000454702 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
CCNB1IP1P3-201ENST00000454702 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
CCNB1IP1P3-201ENST00000454702 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
CCNB1IP1P3-201ENST00000454702 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
CCNB1IP1P3-201ENST00000454702 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
CCNB1IP1P3-201ENST00000454702 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
CCNB1IP1P3-201ENST00000454702 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
CCNB1IP1P3-201ENST00000454702 MIER1Q8N108 512 aa12.03□□□□□ -0.48
CCNB1IP1P3-201ENST00000454702 PKD2Q13563 968 aa12.02□□□□□ -0.49
CCNB1IP1P3-201ENST00000454702 SPOCK2Q92563 424 aa12.02□□□□□ -0.49
CCNB1IP1P3-201ENST00000454702 HAX1O00165 279 aa11.96□□□□□ -0.49
CCNB1IP1P3-201ENST00000454702 AKT1S1Q96B36 256 aa11.95□□□□□ -0.5
CCNB1IP1P3-201ENST00000454702 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
CCNB1IP1P3-201ENST00000454702 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
CCNB1IP1P3-201ENST00000454702 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
CCNB1IP1P3-201ENST00000454702 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
CCNB1IP1P3-201ENST00000454702 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
CCNB1IP1P3-201ENST00000454702 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
CCNB1IP1P3-201ENST00000454702 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
CCNB1IP1P3-201ENST00000454702 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
CCNB1IP1P3-201ENST00000454702 EVX2Q03828 476 aa11.8□□□□□ -0.52
CCNB1IP1P3-201ENST00000454702 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
CCNB1IP1P3-201ENST00000454702 CIZ1Q9ULV3 898 aaPredicted RBP11.78□□□□□ -0.52
CCNB1IP1P3-201ENST00000454702 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
CCNB1IP1P3-201ENST00000454702 PITPNM1O00562 1244 aa11.75□□□□□ -0.53
CCNB1IP1P3-201ENST00000454702 RGL2O15211 777 aa11.75□□□□□ -0.53
CCNB1IP1P3-201ENST00000454702 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
CCNB1IP1P3-201ENST00000454702 NUBP1P53384 320 aa11.71□□□□□ -0.53
CCNB1IP1P3-201ENST00000454702 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
CCNB1IP1P3-201ENST00000454702 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCNB1IP1P3-201ENST00000454702 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCNB1IP1P3-201ENST00000454702 PLSCR2Q9NRY7 297 aa11.65□□□□□ -0.54
CCNB1IP1P3-201ENST00000454702 LHX8Q68G74 356 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms