RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 AEBP2Q6ZN18 517 aaPredicted RBP32.15■■■□□ 2.74
CUL3-208ENST00000454323 CHIC1Q5VXU3 224 aa30.48■■■□□ 2.47
CUL3-208ENST00000454323 SENP3Q9H4L4 574 aaPredicted RBP27.79■■■□□ 2.04
CUL3-208ENST00000454323 PHF23Q9BUL5 403 aaPredicted RBP27.24■■□□□ 1.95
CUL3-208ENST00000454323 FOXD1Q16676 465 aa25.72■■□□□ 1.71
CUL3-208ENST00000454323 MSH5O43196 834 aa24.43■■□□□ 1.5
CUL3-208ENST00000454323 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
CUL3-208ENST00000454323 PIAS4Q8N2W9 510 aaPredicted RBP24.08■■□□□ 1.45
CUL3-208ENST00000454323 POTEDQ86YR6 584 aa24.05■■□□□ 1.44
CUL3-208ENST00000454323 PPP6R1Q9UPN7 881 aa23.72■■□□□ 1.39
CUL3-208ENST00000454323 ADRA2BP18089 450 aa23.69■■□□□ 1.38
CUL3-208ENST00000454323 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
CUL3-208ENST00000454323 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
CUL3-208ENST00000454323 MAPK8IP2Q13387 824 aaPredicted RBP21.78■■□□□ 1.08
CUL3-208ENST00000454323 PPP4R3CPQ6ZMV5 832 aa21.2■□□□□ 0.98
CUL3-208ENST00000454323 DCAF8L1A6NGE4 600 aa21.04■□□□□ 0.96
CUL3-208ENST00000454323 CACNB1Q02641 598 aaPredicted RBP21.03■□□□□ 0.96
CUL3-208ENST00000454323 HOXD11P31277 338 aaPredicted RBP21■□□□□ 0.95
CUL3-208ENST00000454323 CNKSR2Q8WXI2 1034 aa20.97■□□□□ 0.95
CUL3-208ENST00000454323 RNF216Q9NWF9 866 aaPredicted RBP20.83■□□□□ 0.93
CUL3-208ENST00000454323 RNF39Q9H2S5 420 aa20.67■□□□□ 0.9
CUL3-208ENST00000454323 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.88
CUL3-208ENST00000454323 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
CUL3-208ENST00000454323 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
CUL3-208ENST00000454323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
CUL3-208ENST00000454323 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
CUL3-208ENST00000454323 U3KPZ7 1027 aaPredicted RBP19.49■□□□□ 0.71
CUL3-208ENST00000454323 CAPN15O75808 1086 aa19.37■□□□□ 0.69
CUL3-208ENST00000454323 APLP2Q06481 763 aa19.33■□□□□ 0.68
CUL3-208ENST00000454323 KCNA4P22459 653 aa19.3■□□□□ 0.68
CUL3-208ENST00000454323 DSG3P32926 999 aa19.24■□□□□ 0.67
CUL3-208ENST00000454323 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
CUL3-208ENST00000454323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
CUL3-208ENST00000454323 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
CUL3-208ENST00000454323 ZNF219Q9P2Y4 722 aaPredicted RBP19.08■□□□□ 0.64
CUL3-208ENST00000454323 SLC4A2P04920 1241 aa19.06■□□□□ 0.64
CUL3-208ENST00000454323 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
CUL3-208ENST00000454323 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
CUL3-208ENST00000454323 POTEHQ6S545 545 aa18.87■□□□□ 0.61
CUL3-208ENST00000454323 ABCB7O75027 752 aa18.78■□□□□ 0.6
CUL3-208ENST00000454323 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
CUL3-208ENST00000454323 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
CUL3-208ENST00000454323 POLA2Q14181 598 aa18.37■□□□□ 0.53
CUL3-208ENST00000454323 SLC4A1APQ9BWU0 796 aaKnown RBP18.3■□□□□ 0.52
CUL3-208ENST00000454323 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
CUL3-208ENST00000454323 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
CUL3-208ENST00000454323 CHRDL2Q6WN34 429 aa18.13■□□□□ 0.49
CUL3-208ENST00000454323 AKT1S1Q96B36 256 aa18.03■□□□□ 0.48
CUL3-208ENST00000454323 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
CUL3-208ENST00000454323 ATXN8OSP0DMR3 200 aa17.82■□□□□ 0.44
CUL3-208ENST00000454323 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
CUL3-208ENST00000454323 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
CUL3-208ENST00000454323 ZBTB22O15209 634 aa17.63■□□□□ 0.41
CUL3-208ENST00000454323 FBLN2P98095 1184 aa17.62■□□□□ 0.41
CUL3-208ENST00000454323 SP7Q8TDD2 431 aaPredicted RBP17.59■□□□□ 0.41
CUL3-208ENST00000454323 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
CUL3-208ENST00000454323 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
CUL3-208ENST00000454323 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
CUL3-208ENST00000454323 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
CUL3-208ENST00000454323 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
CUL3-208ENST00000454323 FXR2P51116 673 aaKnown RBP eCLIP17.47■□□□□ 0.39
CUL3-208ENST00000454323 HAX1O00165 279 aa17.41■□□□□ 0.38
CUL3-208ENST00000454323 SPDYE1Q8NFV5 336 aaPredicted RBP17.32■□□□□ 0.36
CUL3-208ENST00000454323 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
CUL3-208ENST00000454323 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
CUL3-208ENST00000454323 SSUH2Q9Y2M2 353 aa17.18■□□□□ 0.34
CUL3-208ENST00000454323 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
CUL3-208ENST00000454323 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
CUL3-208ENST00000454323 PRR29P0C7W0 189 aa16.93■□□□□ 0.3
CUL3-208ENST00000454323 C19orf67A6NJJ6 358 aa16.92■□□□□ 0.3
CUL3-208ENST00000454323 EVX2Q03828 476 aa16.91■□□□□ 0.3
CUL3-208ENST00000454323 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
CUL3-208ENST00000454323 CHADLQ6NUI6 762 aa16.77■□□□□ 0.28
CUL3-208ENST00000454323 GABBR2O75899 941 aa16.71■□□□□ 0.27
CUL3-208ENST00000454323 CLCN6P51797 869 aa16.68■□□□□ 0.26
CUL3-208ENST00000454323 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
CUL3-208ENST00000454323 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
CUL3-208ENST00000454323 FARP1Q9Y4F1 1045 aaPredicted RBP16.61■□□□□ 0.25
CUL3-208ENST00000454323 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
CUL3-208ENST00000454323 LHX8Q68G74 356 aa16.48■□□□□ 0.23
CUL3-208ENST00000454323 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
CUL3-208ENST00000454323 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
CUL3-208ENST00000454323 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
CUL3-208ENST00000454323 DCBLD2Q96PD2 775 aa16.35■□□□□ 0.21
CUL3-208ENST00000454323 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
CUL3-208ENST00000454323 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
CUL3-208ENST00000454323 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
CUL3-208ENST00000454323 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
CUL3-208ENST00000454323 POTEIP0CG38 1075 aa16.22■□□□□ 0.19
CUL3-208ENST00000454323 GALR2O43603 387 aaPredicted RBP16.04■□□□□ 0.16
CUL3-208ENST00000454323 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
CUL3-208ENST00000454323 PHF12Q96QT6 1004 aa15.96■□□□□ 0.15
CUL3-208ENST00000454323 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
CUL3-208ENST00000454323 PROM2Q8N271 834 aa15.88■□□□□ 0.13
CUL3-208ENST00000454323 SLC39A7Q92504 469 aa15.8■□□□□ 0.12
CUL3-208ENST00000454323 ASTLQ6HA08 431 aaPredicted RBP15.79■□□□□ 0.12
CUL3-208ENST00000454323 MS4A3Q96HJ5 214 aa15.78■□□□□ 0.12
CUL3-208ENST00000454323 C7P10643 843 aa15.77■□□□□ 0.12
CUL3-208ENST00000454323 OTUD5Q96G74 571 aa15.75■□□□□ 0.11
CUL3-208ENST00000454323 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms