RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
HMGB1P26-201ENST00000452520 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
HMGB1P26-201ENST00000452520 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
HMGB1P26-201ENST00000452520 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
HMGB1P26-201ENST00000452520 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
HMGB1P26-201ENST00000452520 FOXD1Q16676 465 aa18.6■□□□□ 0.57
HMGB1P26-201ENST00000452520 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
HMGB1P26-201ENST00000452520 ADRA2BP18089 450 aa18.16■□□□□ 0.5
HMGB1P26-201ENST00000452520 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
HMGB1P26-201ENST00000452520 MSH5O43196 834 aa17.01■□□□□ 0.31
HMGB1P26-201ENST00000452520 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
HMGB1P26-201ENST00000452520 KCNA4P22459 653 aa16.91■□□□□ 0.3
HMGB1P26-201ENST00000452520 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
HMGB1P26-201ENST00000452520 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
HMGB1P26-201ENST00000452520 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
HMGB1P26-201ENST00000452520 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
HMGB1P26-201ENST00000452520 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
HMGB1P26-201ENST00000452520 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
HMGB1P26-201ENST00000452520 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
HMGB1P26-201ENST00000452520 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
HMGB1P26-201ENST00000452520 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
HMGB1P26-201ENST00000452520 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
HMGB1P26-201ENST00000452520 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
HMGB1P26-201ENST00000452520 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
HMGB1P26-201ENST00000452520 ZBTB22O15209 634 aa15.58■□□□□ 0.08
HMGB1P26-201ENST00000452520 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
HMGB1P26-201ENST00000452520 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
HMGB1P26-201ENST00000452520 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
HMGB1P26-201ENST00000452520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.01
HMGB1P26-201ENST00000452520 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
HMGB1P26-201ENST00000452520 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
HMGB1P26-201ENST00000452520 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
HMGB1P26-201ENST00000452520 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
HMGB1P26-201ENST00000452520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
HMGB1P26-201ENST00000452520 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
HMGB1P26-201ENST00000452520 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
HMGB1P26-201ENST00000452520 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
HMGB1P26-201ENST00000452520 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
HMGB1P26-201ENST00000452520 APLP2Q06481 763 aa14.57□□□□□ -0.08
HMGB1P26-201ENST00000452520 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
HMGB1P26-201ENST00000452520 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
HMGB1P26-201ENST00000452520 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
HMGB1P26-201ENST00000452520 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
HMGB1P26-201ENST00000452520 CAPN15O75808 1086 aa14.32□□□□□ -0.12
HMGB1P26-201ENST00000452520 POLA2Q14181 598 aa14.2□□□□□ -0.14
HMGB1P26-201ENST00000452520 FKBP8Q14318 412 aa14.2□□□□□ -0.14
HMGB1P26-201ENST00000452520 ABCB7O75027 752 aa14.07□□□□□ -0.16
HMGB1P26-201ENST00000452520 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
HMGB1P26-201ENST00000452520 DSG3P32926 999 aa14.02□□□□□ -0.17
HMGB1P26-201ENST00000452520 FBLN2P98095 1184 aa14.02□□□□□ -0.17
HMGB1P26-201ENST00000452520 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
HMGB1P26-201ENST00000452520 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P26-201ENST00000452520 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
HMGB1P26-201ENST00000452520 PROM2Q8N271 834 aa13.71□□□□□ -0.21
HMGB1P26-201ENST00000452520 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
HMGB1P26-201ENST00000452520 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
HMGB1P26-201ENST00000452520 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
HMGB1P26-201ENST00000452520 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
HMGB1P26-201ENST00000452520 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
HMGB1P26-201ENST00000452520 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
HMGB1P26-201ENST00000452520 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
HMGB1P26-201ENST00000452520 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
HMGB1P26-201ENST00000452520 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
HMGB1P26-201ENST00000452520 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
HMGB1P26-201ENST00000452520 VASPP50552 380 aaPredicted RBP13.4□□□□□ -0.26
HMGB1P26-201ENST00000452520 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
HMGB1P26-201ENST00000452520 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
HMGB1P26-201ENST00000452520 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
HMGB1P26-201ENST00000452520 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
HMGB1P26-201ENST00000452520 MIER1Q8N108 512 aa13.16□□□□□ -0.3
HMGB1P26-201ENST00000452520 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
HMGB1P26-201ENST00000452520 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P26-201ENST00000452520 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
HMGB1P26-201ENST00000452520 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
HMGB1P26-201ENST00000452520 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
HMGB1P26-201ENST00000452520 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
HMGB1P26-201ENST00000452520 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
HMGB1P26-201ENST00000452520 PRR29P0C7W0 189 aa13□□□□□ -0.33
HMGB1P26-201ENST00000452520 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
HMGB1P26-201ENST00000452520 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
HMGB1P26-201ENST00000452520 PKD2Q13563 968 aa12.96□□□□□ -0.33
HMGB1P26-201ENST00000452520 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
HMGB1P26-201ENST00000452520 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
HMGB1P26-201ENST00000452520 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
HMGB1P26-201ENST00000452520 NUBP1P53384 320 aa12.79□□□□□ -0.36
HMGB1P26-201ENST00000452520 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
HMGB1P26-201ENST00000452520 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
HMGB1P26-201ENST00000452520 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
HMGB1P26-201ENST00000452520 GSE1Q14687 1217 aa12.71□□□□□ -0.37
HMGB1P26-201ENST00000452520 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
HMGB1P26-201ENST00000452520 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGB1P26-201ENST00000452520 RGL2O15211 777 aa12.67□□□□□ -0.38
HMGB1P26-201ENST00000452520 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
HMGB1P26-201ENST00000452520 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
HMGB1P26-201ENST00000452520 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
HMGB1P26-201ENST00000452520 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
HMGB1P26-201ENST00000452520 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
HMGB1P26-201ENST00000452520 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
HMGB1P26-201ENST00000452520 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
HMGB1P26-201ENST00000452520 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms