RNA–Protein interactions for RNA: ENST00000452383.2

ARAP1-208, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-208	ENST00000452383	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	15.68	■□□□□ 0.1	1e-6	■■■■■ 135
ARAP1-208	ENST00000452383	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.95	□□□□□ -0.18	3e-6	■■■■■ 122.8
ARAP1-208	ENST00000452383	AARS	P49588	968 aa	Known RBP eCLIP	16.05	■□□□□ 0.16	2e-17	■■■■■ 92.7
ARAP1-208	ENST00000452383	RBM22	Q9NW64	420 aa	Known RBP eCLIP	14.84	□□□□□ -0.03	3e-8	■■■■■ 60.2
ARAP1-208	ENST00000452383	SF3B1	O75533	1304 aa	Known RBP eCLIP	16.22	■□□□□ 0.19	1e-9	■■■■■ 53.5
ARAP1-208	ENST00000452383	TARDBP	Q13148	414 aa	Known RBP eCLIP	14.78	□□□□□ -0.04	2e-9	■■■■■ 47.5
ARAP1-208	ENST00000452383	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	16.69	■□□□□ 0.26	1e-10	■■■■■ 36.2
ARAP1-208	ENST00000452383	EIF4G2	P78344	907 aa	Known RBP eCLIP	20.6	■□□□□ 0.89	2e-7	■■■■■ 33.9
ARAP1-208	ENST00000452383	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	2e-9	■■■■■ 33.1
ARAP1-208	ENST00000452383	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	6e-8	■■■■■ 31.6
ARAP1-208	ENST00000452383	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	1e-6	■■■■■ 31.5
ARAP1-208	ENST00000452383	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	17.93	■□□□□ 0.46	2e-7	■■■■■ 27.9
ARAP1-208	ENST00000452383	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.97	□□□□□ -0.17	5e-7	■■■■□ 26.7
ARAP1-208	ENST00000452383	AQR	O60306	1485 aa	Known RBP eCLIP	26.18	■■□□□ 1.78	5e-8	■■■■□ 26.6
ARAP1-208	ENST00000452383	WRN	Q14191	1432 aa	Predicted RBP eCLIP	26.06	■■□□□ 1.76	3e-14	■■■■□ 23.5
ARAP1-208	ENST00000452383	DKC1	O60832	514 aa	Known RBP eCLIP	16.65	■□□□□ 0.26	1e-6	■■■■□ 23.2
ARAP1-208	ENST00000452383	CDC40	O60508	579 aa	Known RBP eCLIP	13.65	□□□□□ -0.22	3e-6	■■■■□ 23
ARAP1-208	ENST00000452383	DDX3X	O00571	662 aa	Known RBP eCLIP	15.11	■□□□□ 0.01	1e-33	■■■■□ 21.7
ARAP1-208	ENST00000452383	PRPF4	O43172	522 aa	Known RBP eCLIP	14.14	□□□□□ -0.15	3e-6	■■■■□ 20.9
ARAP1-208	ENST00000452383	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.65	□□□□□ -0.38	3e-7	■■■■□ 19.7
ARAP1-208	ENST00000452383	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.88	□□□□□ -0.19	8e-6	■■■□□ 18.9
ARAP1-208	ENST00000452383	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.98	□□□□□ -0.33	5e-8	■■■□□ 18.8
ARAP1-208	ENST00000452383	ZC3H11A	O75152	810 aa	Known RBP eCLIP	16.37	■□□□□ 0.21	7e-6	■■■□□ 18.7
ARAP1-208	ENST00000452383	GRSF1	Q12849	480 aa	Known RBP eCLIP	15.64	■□□□□ 0.09	1e-18	■■■□□ 18.5
ARAP1-208	ENST00000452383	PPIG	Q13427	754 aa	Known RBP eCLIP	17.03	■□□□□ 0.32	3e-7	■■■□□ 18.2
ARAP1-208	ENST00000452383	HNRNPM	P52272	730 aa	Known RBP eCLIP	23.36	■■□□□ 1.33	1e-9	■■■□□ 17.8
ARAP1-208	ENST00000452383	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.87	□□□□□ -0.19	6e-9	■■■□□ 16.8
ARAP1-208	ENST00000452383	FXR2	P51116	673 aa	Known RBP eCLIP	16.48	■□□□□ 0.23	2e-6	■■■□□ 16.4
ARAP1-208	ENST00000452383	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	16.97	■□□□□ 0.31	4e-9	■■■□□ 15.3
ARAP1-208	ENST00000452383	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	22.66	■■□□□ 1.22	1e-7	■■□□□ 13.9
ARAP1-208	ENST00000452383	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	15.1	■□□□□ 0.01	6e-6	■■□□□ 13.3
ARAP1-208	ENST00000452383	DDX42	Q86XP3	938 aa	Known RBP eCLIP	15.67	■□□□□ 0.1	9e-9	■■□□□ 12.4
ARAP1-208	ENST00000452383	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	20.15	■□□□□ 0.82	7e-9	■■□□□ 11.4
ARAP1-208	ENST00000452383	FMR1	Q06787	632 aa	Known RBP eCLIP	18.52	■□□□□ 0.56	2e-6	■□□□□ 10.7
ARAP1-208	ENST00000452383	EIF3H	O15372	352 aa	Known RBP eCLIP	14.15	□□□□□ -0.14	3e-6	■□□□□ 10
ARAP1-208	ENST00000452383	RBM5	P52756	815 aa	Known RBP eCLIP	18.37	■□□□□ 0.53	1e-6	■□□□□ 10
ARAP1-208	ENST00000452383	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.31	■□□□□ 0.52	1e-6	■□□□□ 9.8
ARAP1-208	ENST00000452383	TROVE2	P10155	538 aa	Known RBP eCLIP	13.11	□□□□□ -0.31	1e-14	■□□□□ 9.3
ARAP1-208	ENST00000452383	PABPN1	Q86U42	306 aa	Known RBP eCLIP	29.76	■■■□□ 2.35	3e-6	■□□□□ 9.3
ARAP1-208	ENST00000452383	SLBP	Q14493	270 aa	Known RBP eCLIP	13.96	□□□□□ -0.17	6e-8	■□□□□ 8.7
ARAP1-208	ENST00000452383	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	16.05	■□□□□ 0.16	1e-10	■□□□□ 8.6
ARAP1-208	ENST00000452383	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	3e-6	■□□□□ 8.6
ARAP1-208	ENST00000452383	EIF3D	O15371	548 aa	Known RBP eCLIP	16.04	■□□□□ 0.16	1e-7	■□□□□ 8.6
ARAP1-208	ENST00000452383	TRA2A	Q13595	282 aa	Known RBP eCLIP	14.6	□□□□□ -0.07	1e-7	■□□□□ 8.2
ARAP1-208	ENST00000452383	PTBP1	P26599	531 aa	Known RBP eCLIP	11.28	□□□□□ -0.6	6e-8	■□□□□ 8.1

Retrieved 45 of 45 RNA–protein pairs in 19.5 ms