RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
VPS8-211ENST00000452140 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
VPS8-211ENST00000452140 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
VPS8-211ENST00000452140 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
VPS8-211ENST00000452140 FOXD1Q16676 465 aa16.16■□□□□ 0.18
VPS8-211ENST00000452140 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
VPS8-211ENST00000452140 MSH5O43196 834 aa15.23■□□□□ 0.03
VPS8-211ENST00000452140 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
VPS8-211ENST00000452140 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
VPS8-211ENST00000452140 ADRA2BP18089 450 aa15.03■□□□□ -0
VPS8-211ENST00000452140 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
VPS8-211ENST00000452140 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.19
VPS8-211ENST00000452140 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
VPS8-211ENST00000452140 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
VPS8-211ENST00000452140 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
VPS8-211ENST00000452140 KCNA4P22459 653 aa13.39□□□□□ -0.27
VPS8-211ENST00000452140 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
VPS8-211ENST00000452140 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
VPS8-211ENST00000452140 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
VPS8-211ENST00000452140 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
VPS8-211ENST00000452140 CACNB1Q02641 598 aaPredicted RBP13.07□□□□□ -0.32
VPS8-211ENST00000452140 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
VPS8-211ENST00000452140 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
VPS8-211ENST00000452140 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
VPS8-211ENST00000452140 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
VPS8-211ENST00000452140 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
VPS8-211ENST00000452140 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
VPS8-211ENST00000452140 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
VPS8-211ENST00000452140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.38
VPS8-211ENST00000452140 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
VPS8-211ENST00000452140 ZBTB22O15209 634 aa12.35□□□□□ -0.43
VPS8-211ENST00000452140 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
VPS8-211ENST00000452140 CAPN15O75808 1086 aa12.2□□□□□ -0.46
VPS8-211ENST00000452140 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
VPS8-211ENST00000452140 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
VPS8-211ENST00000452140 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
VPS8-211ENST00000452140 APLP2Q06481 763 aa12.13□□□□□ -0.47
VPS8-211ENST00000452140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
VPS8-211ENST00000452140 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
VPS8-211ENST00000452140 DSG3P32926 999 aa12.1□□□□□ -0.47
VPS8-211ENST00000452140 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
VPS8-211ENST00000452140 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
VPS8-211ENST00000452140 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
VPS8-211ENST00000452140 ABCB7O75027 752 aa11.87□□□□□ -0.51
VPS8-211ENST00000452140 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
VPS8-211ENST00000452140 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
VPS8-211ENST00000452140 POLA2Q14181 598 aa11.67□□□□□ -0.54
VPS8-211ENST00000452140 POTEHQ6S545 545 aa11.64□□□□□ -0.55
VPS8-211ENST00000452140 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
VPS8-211ENST00000452140 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
VPS8-211ENST00000452140 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
VPS8-211ENST00000452140 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
VPS8-211ENST00000452140 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
VPS8-211ENST00000452140 FKBP8Q14318 412 aa11.28□□□□□ -0.6
VPS8-211ENST00000452140 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
VPS8-211ENST00000452140 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
VPS8-211ENST00000452140 FBLN2P98095 1184 aa11.18□□□□□ -0.62
VPS8-211ENST00000452140 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
VPS8-211ENST00000452140 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
VPS8-211ENST00000452140 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
VPS8-211ENST00000452140 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
VPS8-211ENST00000452140 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
VPS8-211ENST00000452140 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
VPS8-211ENST00000452140 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS8-211ENST00000452140 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
VPS8-211ENST00000452140 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
VPS8-211ENST00000452140 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
VPS8-211ENST00000452140 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
VPS8-211ENST00000452140 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
VPS8-211ENST00000452140 HAX1O00165 279 aa10.89□□□□□ -0.67
VPS8-211ENST00000452140 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
VPS8-211ENST00000452140 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
VPS8-211ENST00000452140 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
VPS8-211ENST00000452140 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
VPS8-211ENST00000452140 PROM2Q8N271 834 aa10.77□□□□□ -0.69
VPS8-211ENST00000452140 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
VPS8-211ENST00000452140 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
VPS8-211ENST00000452140 FBXO3Q9UK99 471 aa10.71□□□□□ -0.69
VPS8-211ENST00000452140 EVX2Q03828 476 aa10.65□□□□□ -0.7
VPS8-211ENST00000452140 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
VPS8-211ENST00000452140 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
VPS8-211ENST00000452140 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
VPS8-211ENST00000452140 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
VPS8-211ENST00000452140 IFNLR1Q8IU57 520 aaPredicted RBP10.51□□□□□ -0.73
VPS8-211ENST00000452140 FARP1Q9Y4F1 1045 aaPredicted RBP10.51□□□□□ -0.73
VPS8-211ENST00000452140 GABBR2O75899 941 aa10.48□□□□□ -0.73
VPS8-211ENST00000452140 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
VPS8-211ENST00000452140 CLCN6P51797 869 aa10.41□□□□□ -0.74
VPS8-211ENST00000452140 KLHL34Q8N239 644 aa10.38□□□□□ -0.75
VPS8-211ENST00000452140 PLCD3Q8N3E9 789 aa10.38□□□□□ -0.75
VPS8-211ENST00000452140 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
VPS8-211ENST00000452140 MIER1Q8N108 512 aa10.37□□□□□ -0.75
VPS8-211ENST00000452140 SPOCK2Q92563 424 aa10.3□□□□□ -0.76
VPS8-211ENST00000452140 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
VPS8-211ENST00000452140 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
VPS8-211ENST00000452140 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPS8-211ENST00000452140 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
VPS8-211ENST00000452140 PKD2Q13563 968 aa10.27□□□□□ -0.77
VPS8-211ENST00000452140 LHX8Q68G74 356 aa10.24□□□□□ -0.77
VPS8-211ENST00000452140 DCBLD2Q96PD2 775 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1068.9 ms