RNA–Protein interactions for RNA: ENST00000451916.1

CLHC1-208, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 3

Gene CLHC1, Length 616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-208ENST00000451916 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
CLHC1-208ENST00000451916 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
CLHC1-208ENST00000451916 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
CLHC1-208ENST00000451916 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
CLHC1-208ENST00000451916 FOXD1Q16676 465 aa17.4■□□□□ 0.38
CLHC1-208ENST00000451916 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
CLHC1-208ENST00000451916 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
CLHC1-208ENST00000451916 MSH5O43196 834 aa16.44■□□□□ 0.22
CLHC1-208ENST00000451916 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
CLHC1-208ENST00000451916 ADRA2BP18089 450 aa16.19■□□□□ 0.18
CLHC1-208ENST00000451916 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
CLHC1-208ENST00000451916 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
CLHC1-208ENST00000451916 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
CLHC1-208ENST00000451916 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.04
CLHC1-208ENST00000451916 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
CLHC1-208ENST00000451916 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
CLHC1-208ENST00000451916 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
CLHC1-208ENST00000451916 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
CLHC1-208ENST00000451916 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
CLHC1-208ENST00000451916 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
CLHC1-208ENST00000451916 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
CLHC1-208ENST00000451916 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
CLHC1-208ENST00000451916 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
CLHC1-208ENST00000451916 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
CLHC1-208ENST00000451916 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
CLHC1-208ENST00000451916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLHC1-208ENST00000451916 KCNA4P22459 653 aa13.44□□□□□ -0.26
CLHC1-208ENST00000451916 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
CLHC1-208ENST00000451916 CAPN15O75808 1086 aa13.21□□□□□ -0.29
CLHC1-208ENST00000451916 APLP2Q06481 763 aa13.15□□□□□ -0.3
CLHC1-208ENST00000451916 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
CLHC1-208ENST00000451916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
CLHC1-208ENST00000451916 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
CLHC1-208ENST00000451916 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
CLHC1-208ENST00000451916 DSG3P32926 999 aa13.03□□□□□ -0.32
CLHC1-208ENST00000451916 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
CLHC1-208ENST00000451916 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
CLHC1-208ENST00000451916 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
CLHC1-208ENST00000451916 ABCB7O75027 752 aa12.83□□□□□ -0.36
CLHC1-208ENST00000451916 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
CLHC1-208ENST00000451916 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
CLHC1-208ENST00000451916 POTEHQ6S545 545 aa12.73□□□□□ -0.37
CLHC1-208ENST00000451916 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
CLHC1-208ENST00000451916 POLA2Q14181 598 aa12.58□□□□□ -0.4
CLHC1-208ENST00000451916 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
CLHC1-208ENST00000451916 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
CLHC1-208ENST00000451916 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
CLHC1-208ENST00000451916 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
CLHC1-208ENST00000451916 ZBTB22O15209 634 aa12.26□□□□□ -0.45
CLHC1-208ENST00000451916 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
CLHC1-208ENST00000451916 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
CLHC1-208ENST00000451916 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
CLHC1-208ENST00000451916 FBLN2P98095 1184 aa12.11□□□□□ -0.47
CLHC1-208ENST00000451916 REM2Q8IYK8 340 aaPredicted RBP12.06□□□□□ -0.48
CLHC1-208ENST00000451916 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
CLHC1-208ENST00000451916 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
CLHC1-208ENST00000451916 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
CLHC1-208ENST00000451916 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
CLHC1-208ENST00000451916 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
CLHC1-208ENST00000451916 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
CLHC1-208ENST00000451916 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLHC1-208ENST00000451916 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
CLHC1-208ENST00000451916 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
CLHC1-208ENST00000451916 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
CLHC1-208ENST00000451916 HAX1O00165 279 aa11.78□□□□□ -0.52
CLHC1-208ENST00000451916 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
CLHC1-208ENST00000451916 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
CLHC1-208ENST00000451916 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
CLHC1-208ENST00000451916 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
CLHC1-208ENST00000451916 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
CLHC1-208ENST00000451916 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLHC1-208ENST00000451916 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
CLHC1-208ENST00000451916 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
CLHC1-208ENST00000451916 EVX2Q03828 476 aa11.44□□□□□ -0.58
CLHC1-208ENST00000451916 C19orf67A6NJJ6 358 aa11.43□□□□□ -0.58
CLHC1-208ENST00000451916 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
CLHC1-208ENST00000451916 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
CLHC1-208ENST00000451916 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
CLHC1-208ENST00000451916 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
CLHC1-208ENST00000451916 GABBR2O75899 941 aa11.29□□□□□ -0.6
CLHC1-208ENST00000451916 CLCN6P51797 869 aa11.24□□□□□ -0.61
CLHC1-208ENST00000451916 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
CLHC1-208ENST00000451916 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
CLHC1-208ENST00000451916 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
CLHC1-208ENST00000451916 ZRANB1Q9UGI0 708 aa11.15□□□□□ -0.62
CLHC1-208ENST00000451916 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLHC1-208ENST00000451916 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
CLHC1-208ENST00000451916 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
CLHC1-208ENST00000451916 LHX8Q68G74 356 aa11.06□□□□□ -0.64
CLHC1-208ENST00000451916 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
CLHC1-208ENST00000451916 POTEIP0CG38 1075 aa10.95□□□□□ -0.66
CLHC1-208ENST00000451916 PROM2Q8N271 834 aa10.95□□□□□ -0.66
CLHC1-208ENST00000451916 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
CLHC1-208ENST00000451916 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
CLHC1-208ENST00000451916 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
CLHC1-208ENST00000451916 MIER1Q8N108 512 aa10.89□□□□□ -0.67
CLHC1-208ENST00000451916 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
CLHC1-208ENST00000451916 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
CLHC1-208ENST00000451916 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
CLHC1-208ENST00000451916 MS4A3Q96HJ5 214 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms