RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
SMARCA2-214ENST00000450198 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
SMARCA2-214ENST00000450198 SUPT5HO00267 1087 aaKnown RBP23.14■■□□□ 1.3
SMARCA2-214ENST00000450198 APLP2Q06481 763 aa23.06■■□□□ 1.28
SMARCA2-214ENST00000450198 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
SMARCA2-214ENST00000450198 EHMT2Q96KQ7 1210 aa22.73■■□□□ 1.23
SMARCA2-214ENST00000450198 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
SMARCA2-214ENST00000450198 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
SMARCA2-214ENST00000450198 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
SMARCA2-214ENST00000450198 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
SMARCA2-214ENST00000450198 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
SMARCA2-214ENST00000450198 CCER1Q8TC90 406 aaPredicted RBP21.98■■□□□ 1.11
SMARCA2-214ENST00000450198 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
SMARCA2-214ENST00000450198 ERICH6Q7L0X2 663 aa21.88■■□□□ 1.09
SMARCA2-214ENST00000450198 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
SMARCA2-214ENST00000450198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
SMARCA2-214ENST00000450198 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
SMARCA2-214ENST00000450198 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
SMARCA2-214ENST00000450198 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
SMARCA2-214ENST00000450198 NEFLP07196 543 aa21.47■■□□□ 1.03
SMARCA2-214ENST00000450198 CENPBP07199 599 aaPredicted RBP21.42■■□□□ 1.02
SMARCA2-214ENST00000450198 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
SMARCA2-214ENST00000450198 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
SMARCA2-214ENST00000450198 SLC4A1APQ9BWU0 796 aaKnown RBP21.23■□□□□ 0.99
SMARCA2-214ENST00000450198 DAXXQ9UER7 740 aaPredicted RBP21.2■□□□□ 0.99
SMARCA2-214ENST00000450198 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.98
SMARCA2-214ENST00000450198 ITGAEP38570 1179 aa20.94■□□□□ 0.94
SMARCA2-214ENST00000450198 BCANQ96GW7 911 aa20.77■□□□□ 0.92
SMARCA2-214ENST00000450198 YTHDC1Q96MU7 727 aaKnown RBP20.76■□□□□ 0.91
SMARCA2-214ENST00000450198 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
SMARCA2-214ENST00000450198 CLSPNQ9HAW4 1339 aa20.71■□□□□ 0.91
SMARCA2-214ENST00000450198 ZBTB47Q9UFB7 747 aaPredicted RBP20.69■□□□□ 0.9
SMARCA2-214ENST00000450198 ESF1Q9H501 851 aaKnown RBP20.66■□□□□ 0.9
SMARCA2-214ENST00000450198 FBLN2P98095 1184 aa20.65■□□□□ 0.9
SMARCA2-214ENST00000450198 SLC24A1O60721 1099 aa20.64■□□□□ 0.9
SMARCA2-214ENST00000450198 NEFMP07197 916 aa20.57■□□□□ 0.88
SMARCA2-214ENST00000450198 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
SMARCA2-214ENST00000450198 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
SMARCA2-214ENST00000450198 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
SMARCA2-214ENST00000450198 FAM50AQ14320 339 aaKnown RBP20.44■□□□□ 0.86
SMARCA2-214ENST00000450198 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
SMARCA2-214ENST00000450198 MYT1Q01538 1121 aa20.35■□□□□ 0.85
SMARCA2-214ENST00000450198 STAG3Q9UJ98 1225 aa20.31■□□□□ 0.84
SMARCA2-214ENST00000450198 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
SMARCA2-214ENST00000450198 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
SMARCA2-214ENST00000450198 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
SMARCA2-214ENST00000450198 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
SMARCA2-214ENST00000450198 RTL5Q5HYW3 569 aaPredicted RBP20.23■□□□□ 0.83
SMARCA2-214ENST00000450198 CANXP27824 592 aaKnown RBP20.22■□□□□ 0.83
SMARCA2-214ENST00000450198 CDK11AQ9UQ88 783 aaPredicted RBP20.14■□□□□ 0.81
SMARCA2-214ENST00000450198 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
SMARCA2-214ENST00000450198 ABCC9O60706 1549 aa20.1■□□□□ 0.81
SMARCA2-214ENST00000450198 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
SMARCA2-214ENST00000450198 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
SMARCA2-214ENST00000450198 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
SMARCA2-214ENST00000450198 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.79
SMARCA2-214ENST00000450198 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
SMARCA2-214ENST00000450198 A0A0G2JS52 829 aa19.96■□□□□ 0.79
SMARCA2-214ENST00000450198 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
SMARCA2-214ENST00000450198 ANP32CO43423 234 aa19.91■□□□□ 0.78
SMARCA2-214ENST00000450198 HRCP23327 699 aa19.8■□□□□ 0.76
SMARCA2-214ENST00000450198 C14orf37Q86TY3 774 aa19.78■□□□□ 0.76
SMARCA2-214ENST00000450198 HAP1P54257 671 aaPredicted RBP19.78■□□□□ 0.76
SMARCA2-214ENST00000450198 CDK11BP21127 795 aaKnown RBP19.78■□□□□ 0.76
SMARCA2-214ENST00000450198 P3H3Q8IVL6 736 aa19.78■□□□□ 0.76
SMARCA2-214ENST00000450198 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
SMARCA2-214ENST00000450198 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
SMARCA2-214ENST00000450198 HSP90AA1P07900 732 aaKnown RBP19.65■□□□□ 0.74
SMARCA2-214ENST00000450198 ANP32BQ92688 251 aaKnown RBP19.64■□□□□ 0.73
SMARCA2-214ENST00000450198 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
SMARCA2-214ENST00000450198 ARID4BQ4LE39 1312 aaPredicted RBP19.61■□□□□ 0.73
SMARCA2-214ENST00000450198 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
SMARCA2-214ENST00000450198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.724e-7■■■■□ 23.1
SMARCA2-214ENST00000450198 UPF2Q9HAU5 1272 aaKnown RBP19.56■□□□□ 0.72
SMARCA2-214ENST00000450198 TSPY4P0CV99 314 aa19.55■□□□□ 0.72
SMARCA2-214ENST00000450198 TSPY10P0CW01 314 aa19.55■□□□□ 0.72
SMARCA2-214ENST00000450198 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
SMARCA2-214ENST00000450198 PLEKHG5O94827 1062 aa19.51■□□□□ 0.71
SMARCA2-214ENST00000450198 NPHP1O15259 732 aa19.47■□□□□ 0.71
SMARCA2-214ENST00000450198 MYH16Q9H6N6 1097 aa19.44■□□□□ 0.7
SMARCA2-214ENST00000450198 ARXQ96QS3 562 aa19.43■□□□□ 0.7
SMARCA2-214ENST00000450198 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
SMARCA2-214ENST00000450198 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.41■□□□□ 0.7
SMARCA2-214ENST00000450198 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
SMARCA2-214ENST00000450198 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMARCA2-214ENST00000450198 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
SMARCA2-214ENST00000450198 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
SMARCA2-214ENST00000450198 KCNH8Q96L42 1107 aa19.3■□□□□ 0.68
SMARCA2-214ENST00000450198 LMOD2Q6P5Q4 547 aa19.28■□□□□ 0.68
SMARCA2-214ENST00000450198 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
SMARCA2-214ENST00000450198 PLEKHD1A6NEE1 506 aa19.21■□□□□ 0.67
SMARCA2-214ENST00000450198 KDM2AQ9Y2K7 1162 aa19.21■□□□□ 0.67
SMARCA2-214ENST00000450198 CHIC2Q9UKJ5 165 aa19.2■□□□□ 0.66
SMARCA2-214ENST00000450198 TULP1O00294 542 aaPredicted RBP19.18■□□□□ 0.66
SMARCA2-214ENST00000450198 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.662e-6■■■■□ 21.2
SMARCA2-214ENST00000450198 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
SMARCA2-214ENST00000450198 CFAP53Q96M91 514 aa19.16■□□□□ 0.66
SMARCA2-214ENST00000450198 HDGFP51858 240 aaKnown RBP19.15■□□□□ 0.66
SMARCA2-214ENST00000450198 SALL2Q9Y467 1007 aaPredicted RBP19.14■□□□□ 0.65
SMARCA2-214ENST00000450198 MTUS2Q5JR59 1369 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1325.4 ms