RNA–Protein interactions for RNA: ENST00000449825.5

CHID1-204, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHID1, Length 3,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-204ENST00000449825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■■■■■ 193.6
CHID1-204ENST00000449825 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.34□□□□□ -0.439e-7■■■■■ 116.7
CHID1-204ENST00000449825 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■■■■■ 88.3
CHID1-204ENST00000449825 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.512e-15■■■■■ 66.8
CHID1-204ENST00000449825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.45□□□□□ -0.422e-6■■■■■ 56.2
CHID1-204ENST00000449825 NSUN2Q08J23 767 aaKnown RBP eCLIP11.88□□□□□ -0.511e-10■■■■■ 46.3
CHID1-204ENST00000449825 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.41e-9■■■■■ 46
CHID1-204ENST00000449825 EFTUD2Q15029 972 aaKnown RBP eCLIP12.16□□□□□ -0.462e-7■■■■■ 41.6
CHID1-204ENST00000449825 AKAP1Q92667 903 aaKnown RBP eCLIP11.33□□□□□ -0.63e-9■■■■■ 39.5
CHID1-204ENST00000449825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.334e-6■■■■■ 37.3
CHID1-204ENST00000449825 CDC40O60508 579 aaKnown RBP eCLIP10.46□□□□□ -0.732e-7■■■■■ 37
CHID1-204ENST00000449825 PCBP2Q15366 365 aaKnown RBP eCLIP11.21□□□□□ -0.625e-7■■■■■ 36.9
CHID1-204ENST00000449825 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.69□□□□□ -0.544e-6■■■■■ 36.3
CHID1-204ENST00000449825 TARDBPQ13148 414 aaKnown RBP eCLIP11.35□□□□□ -0.592e-6■■■■■ 36
CHID1-204ENST00000449825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.42□□□□□ -0.269e-8■■■■■ 32.5
CHID1-204ENST00000449825 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.158e-8■■■■■ 31.9
CHID1-204ENST00000449825 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.37□□□□□ -0.591e-6■■■■■ 31.8
CHID1-204ENST00000449825 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.211e-6■■■■■ 31.4
CHID1-204ENST00000449825 GTF2F1P35269 517 aaKnown RBP eCLIP13.92□□□□□ -0.185e-7■■■■■ 27.5
CHID1-204ENST00000449825 RBFOX2O43251 390 aaKnown RBP eCLIP9.78□□□□□ -0.843e-7■■■■□ 26.7
CHID1-204ENST00000449825 SMNDC1O75940 238 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■■■□ 26.5
CHID1-204ENST00000449825 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.46□□□□□ -0.577e-8■■■■□ 26.2
CHID1-204ENST00000449825 HNRNPMP52272 730 aaKnown RBP eCLIP15.86■□□□□ 0.132e-7■■■■□ 25.4
CHID1-204ENST00000449825 SF3B4Q15427 424 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■■■□ 24.9
CHID1-204ENST00000449825 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.5□□□□□ -0.419e-7■■■■□ 24.3
CHID1-204ENST00000449825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.61□□□□□ -0.394e-7■■■■□ 24.3
CHID1-204ENST00000449825 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■■□ 24.2
CHID1-204ENST00000449825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■■■□ 24.1
CHID1-204ENST00000449825 ILF3Q12906 894 aaKnown RBP eCLIP10.66□□□□□ -0.77e-7■■■■□ 23.2
CHID1-204ENST00000449825 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.87e-7■■■■□ 23.1
CHID1-204ENST00000449825 PABPC4Q13310 644 aaKnown RBP eCLIP12.71□□□□□ -0.381e-6■■■■□ 23
CHID1-204ENST00000449825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.72□□□□□ -0.852e-10■■■■□ 22.6
CHID1-204ENST00000449825 GRSF1Q12849 480 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■■■□ 22.4
CHID1-204ENST00000449825 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.668e-7■■■■□ 21.6
CHID1-204ENST00000449825 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.111e-6■■■■□ 21.5
CHID1-204ENST00000449825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.39□□□□□ -0.277e-6■■■■□ 21
CHID1-204ENST00000449825 NONOQ15233 471 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■■□ 20.6
CHID1-204ENST00000449825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■■■□ 20.5
CHID1-204ENST00000449825 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.27□□□□□ -0.614e-7■■■■□ 20.3
CHID1-204ENST00000449825 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.63e-7■■■■□ 19.8
CHID1-204ENST00000449825 PRPF4O43172 522 aaKnown RBP eCLIP12.08□□□□□ -0.484e-6■■■□□ 18.4
CHID1-204ENST00000449825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.166e-6■■■□□ 18
CHID1-204ENST00000449825 LARP4Q71RC2 724 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■□□ 16
CHID1-204ENST00000449825 SND1Q7KZF4 910 aaKnown RBP eCLIP12.91□□□□□ -0.345e-7■■■□□ 15.4
CHID1-204ENST00000449825 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■■■□□ 14.7
CHID1-204ENST00000449825 DDX3XO00571 662 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■□□□ 14.1
CHID1-204ENST00000449825 RPS3P23396 243 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■□□□ 14.1
CHID1-204ENST00000449825 PPIGQ13427 754 aaKnown RBP eCLIP11.12□□□□□ -0.632e-6■■□□□ 13.9
CHID1-204ENST00000449825 YBX3P16989 372 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■□□□ 13.1
CHID1-204ENST00000449825 NKRFO15226 690 aaKnown RBP eCLIP12.89□□□□□ -0.354e-6■■□□□ 11.7
CHID1-204ENST00000449825 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.24□□□□□ -0.451e-7■■□□□ 11.7
CHID1-204ENST00000449825 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.66□□□□□ -0.543e-11■■□□□ 11.4
CHID1-204ENST00000449825 NIPBLQ6KC79 2804 aaeCLIP8.68□□□□□ -1.022e-6■□□□□ 11.3
CHID1-204ENST00000449825 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.55□□□□□ -0.42e-7■□□□□ 11.2
CHID1-204ENST00000449825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.053e-6■□□□□ 8.9
CHID1-204ENST00000449825 RBM22Q9NW64 420 aaKnown RBP eCLIP11.64□□□□□ -0.555e-7■□□□□ 8.8
CHID1-204ENST00000449825 SFPQP23246 707 aaKnown RBP eCLIP13.42□□□□□ -0.261e-7■□□□□ 8.1
Retrieved 57 of 57 RNA–protein pairs in 17.1 ms