RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
AC006001.3-201ENST00000449307 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
AC006001.3-201ENST00000449307 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
AC006001.3-201ENST00000449307 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
AC006001.3-201ENST00000449307 FAM9AQ8IZU1 332 aaPredicted RBP20.48■□□□□ 0.87
AC006001.3-201ENST00000449307 APLP2Q06481 763 aa20.32■□□□□ 0.84
AC006001.3-201ENST00000449307 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
AC006001.3-201ENST00000449307 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
AC006001.3-201ENST00000449307 TTBK1Q5TCY1 1321 aaPredicted RBP20.08■□□□□ 0.81
AC006001.3-201ENST00000449307 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
AC006001.3-201ENST00000449307 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
AC006001.3-201ENST00000449307 MYT1LQ9UL68 1186 aa19.65■□□□□ 0.74
AC006001.3-201ENST00000449307 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
AC006001.3-201ENST00000449307 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
AC006001.3-201ENST00000449307 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
AC006001.3-201ENST00000449307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
AC006001.3-201ENST00000449307 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
AC006001.3-201ENST00000449307 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
AC006001.3-201ENST00000449307 ERICH6Q7L0X2 663 aa19.22■□□□□ 0.67
AC006001.3-201ENST00000449307 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
AC006001.3-201ENST00000449307 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
AC006001.3-201ENST00000449307 SLC4A1APQ9BWU0 796 aaKnown RBP19.02■□□□□ 0.63
AC006001.3-201ENST00000449307 ITGAEP38570 1179 aa18.95■□□□□ 0.62
AC006001.3-201ENST00000449307 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
AC006001.3-201ENST00000449307 CNGB1Q14028 1251 aaPredicted RBP18.89■□□□□ 0.61
AC006001.3-201ENST00000449307 NEFLP07196 543 aa18.82■□□□□ 0.6
AC006001.3-201ENST00000449307 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
AC006001.3-201ENST00000449307 CENPBP07199 599 aaPredicted RBP18.77■□□□□ 0.6
AC006001.3-201ENST00000449307 FBLN2P98095 1184 aa18.64■□□□□ 0.58
AC006001.3-201ENST00000449307 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
AC006001.3-201ENST00000449307 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.57
AC006001.3-201ENST00000449307 BCANQ96GW7 911 aa18.57■□□□□ 0.56
AC006001.3-201ENST00000449307 DAXXQ9UER7 740 aaPredicted RBP18.57■□□□□ 0.56
AC006001.3-201ENST00000449307 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
AC006001.3-201ENST00000449307 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
AC006001.3-201ENST00000449307 ABCC9O60706 1549 aa18.42■□□□□ 0.54
AC006001.3-201ENST00000449307 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
AC006001.3-201ENST00000449307 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
AC006001.3-201ENST00000449307 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
AC006001.3-201ENST00000449307 MYT1Q01538 1121 aa18.27■□□□□ 0.51
AC006001.3-201ENST00000449307 ESF1Q9H501 851 aaKnown RBP18.25■□□□□ 0.51
AC006001.3-201ENST00000449307 BCL11AQ9H165 835 aa18.24■□□□□ 0.51
AC006001.3-201ENST00000449307 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
AC006001.3-201ENST00000449307 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
AC006001.3-201ENST00000449307 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
AC006001.3-201ENST00000449307 ZBTB47Q9UFB7 747 aaPredicted RBP18.11■□□□□ 0.49
AC006001.3-201ENST00000449307 ZNF316A6NFI3 1004 aaPredicted RBP18.08■□□□□ 0.49
AC006001.3-201ENST00000449307 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.49
AC006001.3-201ENST00000449307 STAG3Q9UJ98 1225 aa18.06■□□□□ 0.48
AC006001.3-201ENST00000449307 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
AC006001.3-201ENST00000449307 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
AC006001.3-201ENST00000449307 P3H3Q8IVL6 736 aa18■□□□□ 0.47
AC006001.3-201ENST00000449307 NEFMP07197 916 aa18■□□□□ 0.47
AC006001.3-201ENST00000449307 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
AC006001.3-201ENST00000449307 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
AC006001.3-201ENST00000449307 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
AC006001.3-201ENST00000449307 A0A0G2JS52 829 aa17.93■□□□□ 0.46
AC006001.3-201ENST00000449307 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
AC006001.3-201ENST00000449307 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
AC006001.3-201ENST00000449307 HRCP23327 699 aa17.72■□□□□ 0.43
AC006001.3-201ENST00000449307 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
AC006001.3-201ENST00000449307 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
AC006001.3-201ENST00000449307 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
AC006001.3-201ENST00000449307 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
AC006001.3-201ENST00000449307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
AC006001.3-201ENST00000449307 ANP32CO43423 234 aa17.65■□□□□ 0.42
AC006001.3-201ENST00000449307 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
AC006001.3-201ENST00000449307 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
AC006001.3-201ENST00000449307 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
AC006001.3-201ENST00000449307 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
AC006001.3-201ENST00000449307 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
AC006001.3-201ENST00000449307 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
AC006001.3-201ENST00000449307 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
AC006001.3-201ENST00000449307 PPP1R15AO75807 674 aaPredicted RBP17.46■□□□□ 0.39
AC006001.3-201ENST00000449307 KCNH8Q96L42 1107 aa17.43■□□□□ 0.38
AC006001.3-201ENST00000449307 ARXQ96QS3 562 aa17.4■□□□□ 0.38
AC006001.3-201ENST00000449307 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
AC006001.3-201ENST00000449307 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
AC006001.3-201ENST00000449307 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
AC006001.3-201ENST00000449307 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
AC006001.3-201ENST00000449307 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
AC006001.3-201ENST00000449307 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
AC006001.3-201ENST00000449307 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
AC006001.3-201ENST00000449307 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
AC006001.3-201ENST00000449307 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
AC006001.3-201ENST00000449307 NPHP1O15259 732 aa17.28■□□□□ 0.36
AC006001.3-201ENST00000449307 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
AC006001.3-201ENST00000449307 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
AC006001.3-201ENST00000449307 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
AC006001.3-201ENST00000449307 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
AC006001.3-201ENST00000449307 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
AC006001.3-201ENST00000449307 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
AC006001.3-201ENST00000449307 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
AC006001.3-201ENST00000449307 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
AC006001.3-201ENST00000449307 PPM1GO15355 546 aaPredicted RBP17.11■□□□□ 0.33
AC006001.3-201ENST00000449307 MLECQ14165 292 aa17.1■□□□□ 0.33
AC006001.3-201ENST00000449307 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
AC006001.3-201ENST00000449307 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
AC006001.3-201ENST00000449307 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
AC006001.3-201ENST00000449307 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms