RNA–Protein interactions for RNA: ENST00000449140.2

AC096543.2-201, humanhuman

TSL 3 BASIC

Gene AC096543.2, Length 859 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC096543.2-201ENST00000449140 AEBP2Q6ZN18 517 aaPredicted RBP28.79■■■□□ 2.2
AC096543.2-201ENST00000449140 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
AC096543.2-201ENST00000449140 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
AC096543.2-201ENST00000449140 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
AC096543.2-201ENST00000449140 FOXD1Q16676 465 aa22.78■■□□□ 1.24
AC096543.2-201ENST00000449140 PLPPR3Q6T4P5 718 aa22.35■■□□□ 1.17
AC096543.2-201ENST00000449140 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
AC096543.2-201ENST00000449140 ADRA2BP18089 450 aa21.56■■□□□ 1.04
AC096543.2-201ENST00000449140 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
AC096543.2-201ENST00000449140 MSH5O43196 834 aa21.16■□□□□ 0.98
AC096543.2-201ENST00000449140 POTEDQ86YR6 584 aa19.95■□□□□ 0.78
AC096543.2-201ENST00000449140 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
AC096543.2-201ENST00000449140 MAPK8IP2Q13387 824 aaPredicted RBP19.68■□□□□ 0.74
AC096543.2-201ENST00000449140 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
AC096543.2-201ENST00000449140 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
AC096543.2-201ENST00000449140 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
AC096543.2-201ENST00000449140 CNKSR2Q8WXI2 1034 aa19.18■□□□□ 0.66
AC096543.2-201ENST00000449140 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
AC096543.2-201ENST00000449140 HOXD11P31277 338 aaPredicted RBP18.94■□□□□ 0.62
AC096543.2-201ENST00000449140 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
AC096543.2-201ENST00000449140 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
AC096543.2-201ENST00000449140 KCNA4P22459 653 aa18.74■□□□□ 0.59
AC096543.2-201ENST00000449140 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
AC096543.2-201ENST00000449140 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
AC096543.2-201ENST00000449140 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
AC096543.2-201ENST00000449140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
AC096543.2-201ENST00000449140 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
AC096543.2-201ENST00000449140 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
AC096543.2-201ENST00000449140 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
AC096543.2-201ENST00000449140 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
AC096543.2-201ENST00000449140 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
AC096543.2-201ENST00000449140 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
AC096543.2-201ENST00000449140 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
AC096543.2-201ENST00000449140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
AC096543.2-201ENST00000449140 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
AC096543.2-201ENST00000449140 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
AC096543.2-201ENST00000449140 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
AC096543.2-201ENST00000449140 ABCC9O60706 1549 aa17.31■□□□□ 0.36
AC096543.2-201ENST00000449140 CAPN15O75808 1086 aa17.27■□□□□ 0.36
AC096543.2-201ENST00000449140 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
AC096543.2-201ENST00000449140 APLP2Q06481 763 aa17.25■□□□□ 0.35
AC096543.2-201ENST00000449140 ZBTB22O15209 634 aa17.24■□□□□ 0.35
AC096543.2-201ENST00000449140 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
AC096543.2-201ENST00000449140 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
AC096543.2-201ENST00000449140 DSG3P32926 999 aa17.08■□□□□ 0.32
AC096543.2-201ENST00000449140 ABCB7O75027 752 aa16.9■□□□□ 0.3
AC096543.2-201ENST00000449140 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
AC096543.2-201ENST00000449140 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
AC096543.2-201ENST00000449140 EHMT2Q96KQ7 1210 aa16.82■□□□□ 0.28
AC096543.2-201ENST00000449140 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
AC096543.2-201ENST00000449140 POLA2Q14181 598 aa16.73■□□□□ 0.27
AC096543.2-201ENST00000449140 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
AC096543.2-201ENST00000449140 NACADO15069 1562 aa16.49■□□□□ 0.23
AC096543.2-201ENST00000449140 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
AC096543.2-201ENST00000449140 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
AC096543.2-201ENST00000449140 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
AC096543.2-201ENST00000449140 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
AC096543.2-201ENST00000449140 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
AC096543.2-201ENST00000449140 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
AC096543.2-201ENST00000449140 FBLN2P98095 1184 aa16.2■□□□□ 0.18
AC096543.2-201ENST00000449140 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
AC096543.2-201ENST00000449140 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
AC096543.2-201ENST00000449140 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
AC096543.2-201ENST00000449140 MKRN4PQ13434 485 aaPredicted RBP16.14■□□□□ 0.17
AC096543.2-201ENST00000449140 BICRAQ9NZM4 1560 aa16.05■□□□□ 0.16
AC096543.2-201ENST00000449140 AKT1S1Q96B36 256 aa16■□□□□ 0.15
AC096543.2-201ENST00000449140 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
AC096543.2-201ENST00000449140 SPDYE2BA6NHP3 402 aa15.95■□□□□ 0.14
AC096543.2-201ENST00000449140 SPDYE6P0CI01 402 aa15.95■□□□□ 0.14
AC096543.2-201ENST00000449140 SPDYE2Q495Y8 402 aa15.95■□□□□ 0.14
AC096543.2-201ENST00000449140 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
AC096543.2-201ENST00000449140 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
AC096543.2-201ENST00000449140 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
AC096543.2-201ENST00000449140 SSUH2Q9Y2M2 353 aa15.79■□□□□ 0.12
AC096543.2-201ENST00000449140 CHRDL2Q6WN34 429 aa15.77■□□□□ 0.12
AC096543.2-201ENST00000449140 POTEHQ6S545 545 aa15.72■□□□□ 0.11
AC096543.2-201ENST00000449140 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
AC096543.2-201ENST00000449140 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
AC096543.2-201ENST00000449140 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
AC096543.2-201ENST00000449140 SPDYE4A6NLX3 237 aa15.58■□□□□ 0.08
AC096543.2-201ENST00000449140 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
AC096543.2-201ENST00000449140 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
AC096543.2-201ENST00000449140 CLEC11AQ9Y240 323 aa15.52■□□□□ 0.08
AC096543.2-201ENST00000449140 PIP4P2Q8N4L2 257 aa15.48■□□□□ 0.07
AC096543.2-201ENST00000449140 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
AC096543.2-201ENST00000449140 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
AC096543.2-201ENST00000449140 PROM2Q8N271 834 aa15.28■□□□□ 0.04
AC096543.2-201ENST00000449140 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
AC096543.2-201ENST00000449140 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
AC096543.2-201ENST00000449140 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
AC096543.2-201ENST00000449140 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
AC096543.2-201ENST00000449140 FKBP8Q14318 412 aa15.23■□□□□ 0.03
AC096543.2-201ENST00000449140 ATAD2BQ9ULI0 1458 aa15.21■□□□□ 0.03
AC096543.2-201ENST00000449140 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
AC096543.2-201ENST00000449140 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
AC096543.2-201ENST00000449140 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
AC096543.2-201ENST00000449140 HMGXB3Q12766 1538 aa15.12■□□□□ 0.01
AC096543.2-201ENST00000449140 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
AC096543.2-201ENST00000449140 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
AC096543.2-201ENST00000449140 BAZ1BQ9UIG0 1483 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms