RNA–Protein interactions for RNA: ENST00000448303.5

RBM39-217, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-217ENST00000448303 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
RBM39-217ENST00000448303 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
RBM39-217ENST00000448303 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
RBM39-217ENST00000448303 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
RBM39-217ENST00000448303 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
RBM39-217ENST00000448303 FOXD1Q16676 465 aa16.07■□□□□ 0.16
RBM39-217ENST00000448303 PLPPR3Q6T4P5 718 aa15.38■□□□□ 0.05
RBM39-217ENST00000448303 MSH5O43196 834 aa15.29■□□□□ 0.04
RBM39-217ENST00000448303 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
RBM39-217ENST00000448303 ADRA2BP18089 450 aa14.55□□□□□ -0.08
RBM39-217ENST00000448303 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
RBM39-217ENST00000448303 KCNA4P22459 653 aa13.79□□□□□ -0.2
RBM39-217ENST00000448303 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
RBM39-217ENST00000448303 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
RBM39-217ENST00000448303 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
RBM39-217ENST00000448303 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
RBM39-217ENST00000448303 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
RBM39-217ENST00000448303 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
RBM39-217ENST00000448303 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
RBM39-217ENST00000448303 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
RBM39-217ENST00000448303 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
RBM39-217ENST00000448303 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
RBM39-217ENST00000448303 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
RBM39-217ENST00000448303 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
RBM39-217ENST00000448303 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.33
RBM39-217ENST00000448303 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
RBM39-217ENST00000448303 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
RBM39-217ENST00000448303 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
RBM39-217ENST00000448303 ZBTB22O15209 634 aa12.73□□□□□ -0.37
RBM39-217ENST00000448303 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
RBM39-217ENST00000448303 POTEHQ6S545 545 aa12.61□□□□□ -0.39
RBM39-217ENST00000448303 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
RBM39-217ENST00000448303 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
RBM39-217ENST00000448303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.465e-13■■□□□ 11.6
RBM39-217ENST00000448303 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
RBM39-217ENST00000448303 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
RBM39-217ENST00000448303 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
RBM39-217ENST00000448303 DSG3P32926 999 aa11.92□□□□□ -0.5
RBM39-217ENST00000448303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
RBM39-217ENST00000448303 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
RBM39-217ENST00000448303 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
RBM39-217ENST00000448303 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
RBM39-217ENST00000448303 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
RBM39-217ENST00000448303 CAPN15O75808 1086 aa11.81□□□□□ -0.52
RBM39-217ENST00000448303 APLP2Q06481 763 aa11.75□□□□□ -0.53
RBM39-217ENST00000448303 FKBP8Q14318 412 aa11.67□□□□□ -0.54
RBM39-217ENST00000448303 ZNF219Q9P2Y4 722 aaPredicted RBP11.58□□□□□ -0.56
RBM39-217ENST00000448303 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
RBM39-217ENST00000448303 ABCB7O75027 752 aa11.49□□□□□ -0.57
RBM39-217ENST00000448303 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
RBM39-217ENST00000448303 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
RBM39-217ENST00000448303 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
RBM39-217ENST00000448303 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
RBM39-217ENST00000448303 POLA2Q14181 598 aa11.38□□□□□ -0.59
RBM39-217ENST00000448303 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
RBM39-217ENST00000448303 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
RBM39-217ENST00000448303 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
RBM39-217ENST00000448303 PROM2Q8N271 834 aa11.25□□□□□ -0.61
RBM39-217ENST00000448303 FBLN2P98095 1184 aa11.24□□□□□ -0.61
RBM39-217ENST00000448303 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
RBM39-217ENST00000448303 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
RBM39-217ENST00000448303 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
RBM39-217ENST00000448303 HAX1O00165 279 aa11.01□□□□□ -0.65
RBM39-217ENST00000448303 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
RBM39-217ENST00000448303 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
RBM39-217ENST00000448303 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
RBM39-217ENST00000448303 AKT1S1Q96B36 256 aa10.93□□□□□ -0.66
RBM39-217ENST00000448303 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
RBM39-217ENST00000448303 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
RBM39-217ENST00000448303 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
RBM39-217ENST00000448303 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
RBM39-217ENST00000448303 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
RBM39-217ENST00000448303 EVX2Q03828 476 aa10.87□□□□□ -0.67
RBM39-217ENST00000448303 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
RBM39-217ENST00000448303 REM2Q8IYK8 340 aaPredicted RBP10.86□□□□□ -0.67
RBM39-217ENST00000448303 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.685e-6■□□□□ 9.5
RBM39-217ENST00000448303 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
RBM39-217ENST00000448303 PITPNM1O00562 1244 aa10.77□□□□□ -0.69
RBM39-217ENST00000448303 PABPN1Q86U42 306 aaKnown RBP eCLIP10.75□□□□□ -0.692e-8■□□□□ 10
RBM39-217ENST00000448303 PKD2Q13563 968 aa10.73□□□□□ -0.69
RBM39-217ENST00000448303 LHX8Q68G74 356 aa10.72□□□□□ -0.69
RBM39-217ENST00000448303 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
RBM39-217ENST00000448303 SPOCK2Q92563 424 aa10.68□□□□□ -0.7
RBM39-217ENST00000448303 KLHL34Q8N239 644 aa10.64□□□□□ -0.71
RBM39-217ENST00000448303 MIER1Q8N108 512 aa10.61□□□□□ -0.71
RBM39-217ENST00000448303 PLCD3Q8N3E9 789 aa10.61□□□□□ -0.71
RBM39-217ENST00000448303 PLCB2Q00722 1185 aa10.57□□□□□ -0.72
RBM39-217ENST00000448303 SPDYE1Q8NFV5 336 aaPredicted RBP10.56□□□□□ -0.72
RBM39-217ENST00000448303 GABBR2O75899 941 aa10.54□□□□□ -0.72
RBM39-217ENST00000448303 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
RBM39-217ENST00000448303 ZBTB47Q9UFB7 747 aaPredicted RBP10.51□□□□□ -0.73
RBM39-217ENST00000448303 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
RBM39-217ENST00000448303 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
RBM39-217ENST00000448303 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
RBM39-217ENST00000448303 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
RBM39-217ENST00000448303 PRKAR2AP13861 404 aaKnown RBP10.47□□□□□ -0.73
RBM39-217ENST00000448303 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
RBM39-217ENST00000448303 RGL2O15211 777 aa10.42□□□□□ -0.74
RBM39-217ENST00000448303 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
RBM39-217ENST00000448303 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms