RNA–Protein interactions for RNA: ENST00000447117.1

PTENP1-201, Transcript of phosphatase and tensin homolog pseudogene 1, humanhuman

BASIC

Gene PTENP1, Length 1,215 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTENP1-201ENST00000447117 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
PTENP1-201ENST00000447117 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
PTENP1-201ENST00000447117 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
PTENP1-201ENST00000447117 SENP3Q9H4L4 574 aaPredicted RBP20.28■□□□□ 0.84
PTENP1-201ENST00000447117 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
PTENP1-201ENST00000447117 FOXD1Q16676 465 aa18.76■□□□□ 0.59
PTENP1-201ENST00000447117 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
PTENP1-201ENST00000447117 ADRA2BP18089 450 aa18.04■□□□□ 0.48
PTENP1-201ENST00000447117 PIAS4Q8N2W9 510 aaPredicted RBP17.7■□□□□ 0.42
PTENP1-201ENST00000447117 MSH5O43196 834 aa17.54■□□□□ 0.4
PTENP1-201ENST00000447117 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
PTENP1-201ENST00000447117 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
PTENP1-201ENST00000447117 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
PTENP1-201ENST00000447117 KCNA4P22459 653 aa16.4■□□□□ 0.22
PTENP1-201ENST00000447117 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
PTENP1-201ENST00000447117 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
PTENP1-201ENST00000447117 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
PTENP1-201ENST00000447117 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
PTENP1-201ENST00000447117 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
PTENP1-201ENST00000447117 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
PTENP1-201ENST00000447117 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
PTENP1-201ENST00000447117 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
PTENP1-201ENST00000447117 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
PTENP1-201ENST00000447117 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
PTENP1-201ENST00000447117 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
PTENP1-201ENST00000447117 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
PTENP1-201ENST00000447117 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
PTENP1-201ENST00000447117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTENP1-201ENST00000447117 CACNB1Q02641 598 aaPredicted RBP15.09■□□□□ 0.01
PTENP1-201ENST00000447117 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
PTENP1-201ENST00000447117 ZBTB22O15209 634 aa15.06■□□□□ 0
PTENP1-201ENST00000447117 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
PTENP1-201ENST00000447117 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
PTENP1-201ENST00000447117 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
PTENP1-201ENST00000447117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
PTENP1-201ENST00000447117 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
PTENP1-201ENST00000447117 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
PTENP1-201ENST00000447117 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
PTENP1-201ENST00000447117 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
PTENP1-201ENST00000447117 APLP2Q06481 763 aa14.65□□□□□ -0.06
PTENP1-201ENST00000447117 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
PTENP1-201ENST00000447117 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
PTENP1-201ENST00000447117 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
PTENP1-201ENST00000447117 CAPN15O75808 1086 aa14.34□□□□□ -0.11
PTENP1-201ENST00000447117 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
PTENP1-201ENST00000447117 DSG3P32926 999 aa14.12□□□□□ -0.15
PTENP1-201ENST00000447117 POLA2Q14181 598 aa14.08□□□□□ -0.16
PTENP1-201ENST00000447117 ABCB7O75027 752 aa14.04□□□□□ -0.16
PTENP1-201ENST00000447117 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
PTENP1-201ENST00000447117 FBLN2P98095 1184 aa13.9□□□□□ -0.18
PTENP1-201ENST00000447117 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
PTENP1-201ENST00000447117 FKBP8Q14318 412 aa13.61□□□□□ -0.23
PTENP1-201ENST00000447117 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
PTENP1-201ENST00000447117 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
PTENP1-201ENST00000447117 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
PTENP1-201ENST00000447117 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
PTENP1-201ENST00000447117 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
PTENP1-201ENST00000447117 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
PTENP1-201ENST00000447117 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
PTENP1-201ENST00000447117 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
PTENP1-201ENST00000447117 POTEHQ6S545 545 aa13.43□□□□□ -0.26
PTENP1-201ENST00000447117 PROM2Q8N271 834 aa13.41□□□□□ -0.26
PTENP1-201ENST00000447117 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
PTENP1-201ENST00000447117 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTENP1-201ENST00000447117 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
PTENP1-201ENST00000447117 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
PTENP1-201ENST00000447117 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
PTENP1-201ENST00000447117 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
PTENP1-201ENST00000447117 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
PTENP1-201ENST00000447117 PITPNM1O00562 1244 aa13□□□□□ -0.33
PTENP1-201ENST00000447117 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
PTENP1-201ENST00000447117 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
PTENP1-201ENST00000447117 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
PTENP1-201ENST00000447117 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
PTENP1-201ENST00000447117 MIER1Q8N108 512 aa12.84□□□□□ -0.35
PTENP1-201ENST00000447117 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
PTENP1-201ENST00000447117 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTENP1-201ENST00000447117 PIP4P2Q8N4L2 257 aa12.79□□□□□ -0.36
PTENP1-201ENST00000447117 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
PTENP1-201ENST00000447117 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
PTENP1-201ENST00000447117 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
PTENP1-201ENST00000447117 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
PTENP1-201ENST00000447117 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
PTENP1-201ENST00000447117 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
PTENP1-201ENST00000447117 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
PTENP1-201ENST00000447117 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
PTENP1-201ENST00000447117 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTENP1-201ENST00000447117 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
PTENP1-201ENST00000447117 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
PTENP1-201ENST00000447117 HAX1O00165 279 aa12.59□□□□□ -0.39
PTENP1-201ENST00000447117 SP7Q8TDD2 431 aaPredicted RBP12.59□□□□□ -0.39
PTENP1-201ENST00000447117 NUBP1P53384 320 aa12.53□□□□□ -0.4
PTENP1-201ENST00000447117 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
PTENP1-201ENST00000447117 GSE1Q14687 1217 aa12.45□□□□□ -0.42
PTENP1-201ENST00000447117 FAM212AQ96EL1 285 aa12.45□□□□□ -0.42
PTENP1-201ENST00000447117 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
PTENP1-201ENST00000447117 EVX2Q03828 476 aa12.41□□□□□ -0.42
PTENP1-201ENST00000447117 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
PTENP1-201ENST00000447117 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
PTENP1-201ENST00000447117 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms