RNA–Protein interactions for RNA: ENST00000446404.1

AP000402.1-201, humanhuman

TSL 3 BASIC

Gene AP000402.1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000402.1-201ENST00000446404 AEBP2Q6ZN18 517 aaPredicted RBP29.85■■■□□ 2.37
AP000402.1-201ENST00000446404 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
AP000402.1-201ENST00000446404 PHF23Q9BUL5 403 aaPredicted RBP26.07■■□□□ 1.76
AP000402.1-201ENST00000446404 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
AP000402.1-201ENST00000446404 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
AP000402.1-201ENST00000446404 FOXD1Q16676 465 aa23.38■■□□□ 1.33
AP000402.1-201ENST00000446404 PPP6R1Q9UPN7 881 aa22.85■■□□□ 1.25
AP000402.1-201ENST00000446404 ADRA2BP18089 450 aa22.84■■□□□ 1.25
AP000402.1-201ENST00000446404 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
AP000402.1-201ENST00000446404 MSH5O43196 834 aa21.41■■□□□ 1.02
AP000402.1-201ENST00000446404 KCNA4P22459 653 aa21.4■■□□□ 1.02
AP000402.1-201ENST00000446404 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
AP000402.1-201ENST00000446404 NCBP3Q53F19 620 aaKnown RBP20.97■□□□□ 0.95
AP000402.1-201ENST00000446404 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
AP000402.1-201ENST00000446404 CNKSR2Q8WXI2 1034 aa20.71■□□□□ 0.91
AP000402.1-201ENST00000446404 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
AP000402.1-201ENST00000446404 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
AP000402.1-201ENST00000446404 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
AP000402.1-201ENST00000446404 EHMT2Q96KQ7 1210 aa20.36■□□□□ 0.85
AP000402.1-201ENST00000446404 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
AP000402.1-201ENST00000446404 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
AP000402.1-201ENST00000446404 DNAJC5BQ9UF47 199 aa20.05■□□□□ 0.8
AP000402.1-201ENST00000446404 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
AP000402.1-201ENST00000446404 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
AP000402.1-201ENST00000446404 ZBTB22O15209 634 aa19.7■□□□□ 0.74
AP000402.1-201ENST00000446404 FOXD4L1Q9NU39 408 aa19.59■□□□□ 0.73
AP000402.1-201ENST00000446404 SLC4A2P04920 1241 aa19.41■□□□□ 0.7
AP000402.1-201ENST00000446404 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
AP000402.1-201ENST00000446404 DCAF8L1A6NGE4 600 aa19.3■□□□□ 0.68
AP000402.1-201ENST00000446404 MYCNP04198 464 aaPredicted RBP19.09■□□□□ 0.65
AP000402.1-201ENST00000446404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
AP000402.1-201ENST00000446404 ATXN8OSP0DMR3 200 aa18.88■□□□□ 0.61
AP000402.1-201ENST00000446404 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
AP000402.1-201ENST00000446404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
AP000402.1-201ENST00000446404 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
AP000402.1-201ENST00000446404 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
AP000402.1-201ENST00000446404 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
AP000402.1-201ENST00000446404 APLP2Q06481 763 aa18.43■□□□□ 0.54
AP000402.1-201ENST00000446404 RNF39Q9H2S5 420 aa18.39■□□□□ 0.53
AP000402.1-201ENST00000446404 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
AP000402.1-201ENST00000446404 C1QBPQ07021 282 aaKnown RBP18.19■□□□□ 0.5
AP000402.1-201ENST00000446404 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
AP000402.1-201ENST00000446404 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
AP000402.1-201ENST00000446404 CAPN15O75808 1086 aa18.02■□□□□ 0.48
AP000402.1-201ENST00000446404 FKBP8Q14318 412 aa18■□□□□ 0.47
AP000402.1-201ENST00000446404 POLA2Q14181 598 aa17.86■□□□□ 0.45
AP000402.1-201ENST00000446404 MKRN4PQ13434 485 aaPredicted RBP17.76■□□□□ 0.43
AP000402.1-201ENST00000446404 FBLN2P98095 1184 aa17.73■□□□□ 0.43
AP000402.1-201ENST00000446404 ABCB7O75027 752 aa17.72■□□□□ 0.43
AP000402.1-201ENST00000446404 DSG3P32926 999 aa17.65■□□□□ 0.42
AP000402.1-201ENST00000446404 ZBTB12Q9Y330 459 aaPredicted RBP17.63■□□□□ 0.41
AP000402.1-201ENST00000446404 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
AP000402.1-201ENST00000446404 CACNB1Q02641 598 aaPredicted RBP17.56■□□□□ 0.4
AP000402.1-201ENST00000446404 PROM2Q8N271 834 aa17.37■□□□□ 0.37
AP000402.1-201ENST00000446404 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
AP000402.1-201ENST00000446404 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
AP000402.1-201ENST00000446404 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
AP000402.1-201ENST00000446404 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
AP000402.1-201ENST00000446404 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
AP000402.1-201ENST00000446404 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
AP000402.1-201ENST00000446404 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
AP000402.1-201ENST00000446404 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
AP000402.1-201ENST00000446404 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
AP000402.1-201ENST00000446404 VASPP50552 380 aaPredicted RBP17■□□□□ 0.31
AP000402.1-201ENST00000446404 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
AP000402.1-201ENST00000446404 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
AP000402.1-201ENST00000446404 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
AP000402.1-201ENST00000446404 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
AP000402.1-201ENST00000446404 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
AP000402.1-201ENST00000446404 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
AP000402.1-201ENST00000446404 MIER1Q8N108 512 aa16.59■□□□□ 0.25
AP000402.1-201ENST00000446404 KLHL34Q8N239 644 aa16.58■□□□□ 0.24
AP000402.1-201ENST00000446404 SPDYE1Q8NFV5 336 aaPredicted RBP16.57■□□□□ 0.24
AP000402.1-201ENST00000446404 SPOCK2Q92563 424 aa16.54■□□□□ 0.24
AP000402.1-201ENST00000446404 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
AP000402.1-201ENST00000446404 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
AP000402.1-201ENST00000446404 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
AP000402.1-201ENST00000446404 CLEC11AQ9Y240 323 aa16.44■□□□□ 0.22
AP000402.1-201ENST00000446404 PKD2Q13563 968 aa16.42■□□□□ 0.22
AP000402.1-201ENST00000446404 PRR29P0C7W0 189 aa16.37■□□□□ 0.21
AP000402.1-201ENST00000446404 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
AP000402.1-201ENST00000446404 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
AP000402.1-201ENST00000446404 ECM2O94769 699 aaPredicted RBP16.22■□□□□ 0.19
AP000402.1-201ENST00000446404 SLC24A1O60721 1099 aa16.21■□□□□ 0.19
AP000402.1-201ENST00000446404 MNX1P50219 401 aaPredicted RBP16.18■□□□□ 0.18
AP000402.1-201ENST00000446404 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
AP000402.1-201ENST00000446404 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
AP000402.1-201ENST00000446404 NUBP1P53384 320 aa16.15■□□□□ 0.18
AP000402.1-201ENST00000446404 GSE1Q14687 1217 aa16.09■□□□□ 0.17
AP000402.1-201ENST00000446404 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
AP000402.1-201ENST00000446404 RGL2O15211 777 aa16.05■□□□□ 0.16
AP000402.1-201ENST00000446404 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
AP000402.1-201ENST00000446404 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
AP000402.1-201ENST00000446404 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
AP000402.1-201ENST00000446404 CHADLQ6NUI6 762 aa16■□□□□ 0.15
AP000402.1-201ENST00000446404 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
AP000402.1-201ENST00000446404 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
AP000402.1-201ENST00000446404 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
AP000402.1-201ENST00000446404 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
AP000402.1-201ENST00000446404 FARP1Q9Y4F1 1045 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms