RNA–Protein interactions for RNA: ENST00000446103.5

PBRM1-215, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-215ENST00000446103 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
PBRM1-215ENST00000446103 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
PBRM1-215ENST00000446103 PHF23Q9BUL5 403 aaPredicted RBP16.35■□□□□ 0.21
PBRM1-215ENST00000446103 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
PBRM1-215ENST00000446103 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
PBRM1-215ENST00000446103 KCNA4P22459 653 aa14.6□□□□□ -0.07
PBRM1-215ENST00000446103 ADRA2BP18089 450 aa14.57□□□□□ -0.08
PBRM1-215ENST00000446103 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
PBRM1-215ENST00000446103 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
PBRM1-215ENST00000446103 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
PBRM1-215ENST00000446103 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
PBRM1-215ENST00000446103 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
PBRM1-215ENST00000446103 FOXD1Q16676 465 aa13.65□□□□□ -0.22
PBRM1-215ENST00000446103 ZBTB22O15209 634 aa13.65□□□□□ -0.22
PBRM1-215ENST00000446103 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
PBRM1-215ENST00000446103 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
PBRM1-215ENST00000446103 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
PBRM1-215ENST00000446103 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
PBRM1-215ENST00000446103 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
PBRM1-215ENST00000446103 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
PBRM1-215ENST00000446103 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
PBRM1-215ENST00000446103 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
PBRM1-215ENST00000446103 FKBP8Q14318 412 aa12.67□□□□□ -0.38
PBRM1-215ENST00000446103 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
PBRM1-215ENST00000446103 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-215ENST00000446103 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
PBRM1-215ENST00000446103 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
PBRM1-215ENST00000446103 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.46
PBRM1-215ENST00000446103 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
PBRM1-215ENST00000446103 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
PBRM1-215ENST00000446103 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
PBRM1-215ENST00000446103 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
PBRM1-215ENST00000446103 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
PBRM1-215ENST00000446103 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
PBRM1-215ENST00000446103 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
PBRM1-215ENST00000446103 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
PBRM1-215ENST00000446103 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
PBRM1-215ENST00000446103 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
PBRM1-215ENST00000446103 FBLN2P98095 1184 aa11.9□□□□□ -0.5
PBRM1-215ENST00000446103 BCANQ96GW7 911 aa11.87□□□□□ -0.51
PBRM1-215ENST00000446103 DCAF8L2P0C7V8 631 aa11.8□□□□□ -0.52
PBRM1-215ENST00000446103 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
PBRM1-215ENST00000446103 PKD2Q13563 968 aa11.78□□□□□ -0.52
PBRM1-215ENST00000446103 TIMELESSQ9UNS1 1208 aa11.77□□□□□ -0.53
PBRM1-215ENST00000446103 IFNLR1Q8IU57 520 aaPredicted RBP11.77□□□□□ -0.53
PBRM1-215ENST00000446103 MSH5O43196 834 aa11.71□□□□□ -0.54
PBRM1-215ENST00000446103 NPM1P06748 294 aaKnown RBP eCLIP11.69□□□□□ -0.54
PBRM1-215ENST00000446103 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
PBRM1-215ENST00000446103 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
PBRM1-215ENST00000446103 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
PBRM1-215ENST00000446103 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
PBRM1-215ENST00000446103 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
PBRM1-215ENST00000446103 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-215ENST00000446103 PROM2Q8N271 834 aa11.52□□□□□ -0.57
PBRM1-215ENST00000446103 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-215ENST00000446103 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
PBRM1-215ENST00000446103 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
PBRM1-215ENST00000446103 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
PBRM1-215ENST00000446103 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
PBRM1-215ENST00000446103 RGL2O15211 777 aa11.38□□□□□ -0.59
PBRM1-215ENST00000446103 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
PBRM1-215ENST00000446103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.595e-8■■■■□ 22.9
PBRM1-215ENST00000446103 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
PBRM1-215ENST00000446103 DAXXQ9UER7 740 aaPredicted RBP11.31□□□□□ -0.6
PBRM1-215ENST00000446103 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
PBRM1-215ENST00000446103 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
PBRM1-215ENST00000446103 ECM2O94769 699 aaPredicted RBP11.27□□□□□ -0.61
PBRM1-215ENST00000446103 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.26□□□□□ -0.61
PBRM1-215ENST00000446103 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
PBRM1-215ENST00000446103 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
PBRM1-215ENST00000446103 ARXQ96QS3 562 aa11.14□□□□□ -0.63
PBRM1-215ENST00000446103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-215ENST00000446103 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
PBRM1-215ENST00000446103 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
PBRM1-215ENST00000446103 TMEM132AQ24JP5 1023 aa11.11□□□□□ -0.63
PBRM1-215ENST00000446103 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
PBRM1-215ENST00000446103 SPOCK2Q92563 424 aa11.08□□□□□ -0.64
PBRM1-215ENST00000446103 NBR1Q14596 966 aa11.07□□□□□ -0.64
PBRM1-215ENST00000446103 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
PBRM1-215ENST00000446103 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
PBRM1-215ENST00000446103 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
PBRM1-215ENST00000446103 POLA2Q14181 598 aa11.01□□□□□ -0.65
PBRM1-215ENST00000446103 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
PBRM1-215ENST00000446103 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
PBRM1-215ENST00000446103 SUPT5HO00267 1087 aaKnown RBP10.91□□□□□ -0.66
PBRM1-215ENST00000446103 HOMEZQ8IX15 550 aa10.9□□□□□ -0.67
PBRM1-215ENST00000446103 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
PBRM1-215ENST00000446103 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
PBRM1-215ENST00000446103 HS6ST3Q8IZP7 471 aa10.84□□□□□ -0.67
PBRM1-215ENST00000446103 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
PBRM1-215ENST00000446103 BRPF1P55201 1214 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-215ENST00000446103 ABCB7O75027 752 aa10.78□□□□□ -0.68
PBRM1-215ENST00000446103 MIER1Q8N108 512 aa10.78□□□□□ -0.68
PBRM1-215ENST00000446103 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
PBRM1-215ENST00000446103 PODXL2Q9NZ53 605 aa10.73□□□□□ -0.69
PBRM1-215ENST00000446103 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
PBRM1-215ENST00000446103 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
PBRM1-215ENST00000446103 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
PBRM1-215ENST00000446103 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
PBRM1-215ENST00000446103 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms