RNA–Protein interactions for RNA: ENST00000445514.1

LINC01828-201, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 4 BASIC

Gene LINC01828, Length 531 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-201ENST00000445514 AEBP2Q6ZN18 517 aaPredicted RBP25.26■■□□□ 1.63
LINC01828-201ENST00000445514 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
LINC01828-201ENST00000445514 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
LINC01828-201ENST00000445514 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
LINC01828-201ENST00000445514 FOXD1Q16676 465 aa20.13■□□□□ 0.81
LINC01828-201ENST00000445514 POTEDQ86YR6 584 aa18.94■□□□□ 0.62
LINC01828-201ENST00000445514 MSH5O43196 834 aa18.87■□□□□ 0.61
LINC01828-201ENST00000445514 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
LINC01828-201ENST00000445514 PIAS4Q8N2W9 510 aaPredicted RBP18.72■□□□□ 0.59
LINC01828-201ENST00000445514 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
LINC01828-201ENST00000445514 ADRA2BP18089 450 aa18.55■□□□□ 0.56
LINC01828-201ENST00000445514 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
LINC01828-201ENST00000445514 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
LINC01828-201ENST00000445514 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
LINC01828-201ENST00000445514 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
LINC01828-201ENST00000445514 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
LINC01828-201ENST00000445514 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
LINC01828-201ENST00000445514 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
LINC01828-201ENST00000445514 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
LINC01828-201ENST00000445514 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
LINC01828-201ENST00000445514 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
LINC01828-201ENST00000445514 C1QBPQ07021 282 aaKnown RBP15.82■□□□□ 0.12
LINC01828-201ENST00000445514 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
LINC01828-201ENST00000445514 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
LINC01828-201ENST00000445514 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
LINC01828-201ENST00000445514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.07
LINC01828-201ENST00000445514 U3KPZ7 1027 aaPredicted RBP15.2■□□□□ 0.02
LINC01828-201ENST00000445514 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
LINC01828-201ENST00000445514 CAPN15O75808 1086 aa15.01□□□□□ -0.01
LINC01828-201ENST00000445514 DSG3P32926 999 aa15.01□□□□□ -0.01
LINC01828-201ENST00000445514 KCNA4P22459 653 aa14.99□□□□□ -0.01
LINC01828-201ENST00000445514 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
LINC01828-201ENST00000445514 POTEHQ6S545 545 aa14.78□□□□□ -0.04
LINC01828-201ENST00000445514 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
LINC01828-201ENST00000445514 ABCB7O75027 752 aa14.68□□□□□ -0.06
LINC01828-201ENST00000445514 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
LINC01828-201ENST00000445514 APLP2Q06481 763 aa14.62□□□□□ -0.07
LINC01828-201ENST00000445514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
LINC01828-201ENST00000445514 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
LINC01828-201ENST00000445514 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
LINC01828-201ENST00000445514 MYCNP04198 464 aaPredicted RBP14.31□□□□□ -0.12
LINC01828-201ENST00000445514 POLA2Q14181 598 aa14.26□□□□□ -0.13
LINC01828-201ENST00000445514 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
LINC01828-201ENST00000445514 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
LINC01828-201ENST00000445514 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
LINC01828-201ENST00000445514 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
LINC01828-201ENST00000445514 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
LINC01828-201ENST00000445514 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
LINC01828-201ENST00000445514 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
LINC01828-201ENST00000445514 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
LINC01828-201ENST00000445514 ZBTB22O15209 634 aa13.82□□□□□ -0.2
LINC01828-201ENST00000445514 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
LINC01828-201ENST00000445514 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
LINC01828-201ENST00000445514 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
LINC01828-201ENST00000445514 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
LINC01828-201ENST00000445514 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC01828-201ENST00000445514 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
LINC01828-201ENST00000445514 HAX1O00165 279 aa13.52□□□□□ -0.25
LINC01828-201ENST00000445514 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
LINC01828-201ENST00000445514 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
LINC01828-201ENST00000445514 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
LINC01828-201ENST00000445514 FBLN2P98095 1184 aa13.44□□□□□ -0.26
LINC01828-201ENST00000445514 EVX2Q03828 476 aa13.41□□□□□ -0.26
LINC01828-201ENST00000445514 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
LINC01828-201ENST00000445514 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
LINC01828-201ENST00000445514 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
LINC01828-201ENST00000445514 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
LINC01828-201ENST00000445514 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
LINC01828-201ENST00000445514 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
LINC01828-201ENST00000445514 C19orf67A6NJJ6 358 aa13.17□□□□□ -0.3
LINC01828-201ENST00000445514 CHADLQ6NUI6 762 aa13.13□□□□□ -0.31
LINC01828-201ENST00000445514 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01828-201ENST00000445514 GABBR2O75899 941 aa13.04□□□□□ -0.32
LINC01828-201ENST00000445514 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
LINC01828-201ENST00000445514 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
LINC01828-201ENST00000445514 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
LINC01828-201ENST00000445514 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
LINC01828-201ENST00000445514 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
LINC01828-201ENST00000445514 LHX8Q68G74 356 aa12.86□□□□□ -0.35
LINC01828-201ENST00000445514 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
LINC01828-201ENST00000445514 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
LINC01828-201ENST00000445514 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
LINC01828-201ENST00000445514 CLCN6P51797 869 aa12.65□□□□□ -0.38
LINC01828-201ENST00000445514 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
LINC01828-201ENST00000445514 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
LINC01828-201ENST00000445514 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
LINC01828-201ENST00000445514 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
LINC01828-201ENST00000445514 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
LINC01828-201ENST00000445514 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
LINC01828-201ENST00000445514 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
LINC01828-201ENST00000445514 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.41
LINC01828-201ENST00000445514 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
LINC01828-201ENST00000445514 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
LINC01828-201ENST00000445514 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC01828-201ENST00000445514 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
LINC01828-201ENST00000445514 PELP1Q8IZL8 1130 aaKnown RBP12.35□□□□□ -0.43
LINC01828-201ENST00000445514 MS4A3Q96HJ5 214 aa12.29□□□□□ -0.44
LINC01828-201ENST00000445514 PROM2Q8N271 834 aa12.27□□□□□ -0.45
LINC01828-201ENST00000445514 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
LINC01828-201ENST00000445514 ASTLQ6HA08 431 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms