RNA–Protein interactions for RNA: ENST00000443768.1

AC005539.1-201, humanhuman

BASIC

Gene AC005539.1, Length 1,479 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005539.1-201ENST00000443768 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
AC005539.1-201ENST00000443768 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
AC005539.1-201ENST00000443768 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
AC005539.1-201ENST00000443768 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
AC005539.1-201ENST00000443768 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
AC005539.1-201ENST00000443768 FOXD1Q16676 465 aa18.81■□□□□ 0.6
AC005539.1-201ENST00000443768 MSH5O43196 834 aa18.01■□□□□ 0.47
AC005539.1-201ENST00000443768 PIAS4Q8N2W9 510 aaPredicted RBP17.34■□□□□ 0.37
AC005539.1-201ENST00000443768 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
AC005539.1-201ENST00000443768 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
AC005539.1-201ENST00000443768 ADRA2BP18089 450 aa16.71■□□□□ 0.27
AC005539.1-201ENST00000443768 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
AC005539.1-201ENST00000443768 DMRT2Q9Y5R5 561 aa15.77■□□□□ 0.11
AC005539.1-201ENST00000443768 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
AC005539.1-201ENST00000443768 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
AC005539.1-201ENST00000443768 RNF39Q9H2S5 420 aa15.27■□□□□ 0.03
AC005539.1-201ENST00000443768 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
AC005539.1-201ENST00000443768 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
AC005539.1-201ENST00000443768 KCNA4P22459 653 aa15.09■□□□□ 0.01
AC005539.1-201ENST00000443768 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
AC005539.1-201ENST00000443768 POTEHQ6S545 545 aa14.88□□□□□ -0.03
AC005539.1-201ENST00000443768 HOXD11P31277 338 aaPredicted RBP14.81□□□□□ -0.04
AC005539.1-201ENST00000443768 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
AC005539.1-201ENST00000443768 CNKSR2Q8WXI2 1034 aa14.71□□□□□ -0.05
AC005539.1-201ENST00000443768 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
AC005539.1-201ENST00000443768 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.08
AC005539.1-201ENST00000443768 RNF216Q9NWF9 866 aaPredicted RBP14.43□□□□□ -0.1
AC005539.1-201ENST00000443768 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
AC005539.1-201ENST00000443768 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
AC005539.1-201ENST00000443768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
AC005539.1-201ENST00000443768 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
AC005539.1-201ENST00000443768 ZBTB22O15209 634 aa13.96□□□□□ -0.17
AC005539.1-201ENST00000443768 DSG3P32926 999 aa13.96□□□□□ -0.17
AC005539.1-201ENST00000443768 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
AC005539.1-201ENST00000443768 CAPN15O75808 1086 aa13.79□□□□□ -0.2
AC005539.1-201ENST00000443768 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
AC005539.1-201ENST00000443768 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
AC005539.1-201ENST00000443768 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
AC005539.1-201ENST00000443768 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
AC005539.1-201ENST00000443768 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
AC005539.1-201ENST00000443768 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
AC005539.1-201ENST00000443768 ABCB7O75027 752 aa13.38□□□□□ -0.27
AC005539.1-201ENST00000443768 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
AC005539.1-201ENST00000443768 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
AC005539.1-201ENST00000443768 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
AC005539.1-201ENST00000443768 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
AC005539.1-201ENST00000443768 APLP2Q06481 763 aa13.23□□□□□ -0.29
AC005539.1-201ENST00000443768 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
AC005539.1-201ENST00000443768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
AC005539.1-201ENST00000443768 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
AC005539.1-201ENST00000443768 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
AC005539.1-201ENST00000443768 HAX1O00165 279 aa12.94□□□□□ -0.34
AC005539.1-201ENST00000443768 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
AC005539.1-201ENST00000443768 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
AC005539.1-201ENST00000443768 POLA2Q14181 598 aa12.76□□□□□ -0.37
AC005539.1-201ENST00000443768 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
AC005539.1-201ENST00000443768 EVX2Q03828 476 aa12.69□□□□□ -0.38
AC005539.1-201ENST00000443768 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
AC005539.1-201ENST00000443768 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
AC005539.1-201ENST00000443768 PLSCR2Q9NRY7 297 aa12.64□□□□□ -0.39
AC005539.1-201ENST00000443768 LHX8Q68G74 356 aa12.63□□□□□ -0.39
AC005539.1-201ENST00000443768 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
AC005539.1-201ENST00000443768 FKBP8Q14318 412 aa12.54□□□□□ -0.4
AC005539.1-201ENST00000443768 FBLN2P98095 1184 aa12.47□□□□□ -0.41
AC005539.1-201ENST00000443768 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.42
AC005539.1-201ENST00000443768 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
AC005539.1-201ENST00000443768 GABBR2O75899 941 aa12.36□□□□□ -0.43
AC005539.1-201ENST00000443768 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
AC005539.1-201ENST00000443768 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
AC005539.1-201ENST00000443768 PROM2Q8N271 834 aa12.3□□□□□ -0.44
AC005539.1-201ENST00000443768 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
AC005539.1-201ENST00000443768 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
AC005539.1-201ENST00000443768 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
AC005539.1-201ENST00000443768 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
AC005539.1-201ENST00000443768 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
AC005539.1-201ENST00000443768 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
AC005539.1-201ENST00000443768 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
AC005539.1-201ENST00000443768 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
AC005539.1-201ENST00000443768 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
AC005539.1-201ENST00000443768 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
AC005539.1-201ENST00000443768 CLEC11AQ9Y240 323 aa12.01□□□□□ -0.49
AC005539.1-201ENST00000443768 POTEMA6NI47 508 aa11.95□□□□□ -0.5
AC005539.1-201ENST00000443768 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
AC005539.1-201ENST00000443768 CLCN6P51797 869 aa11.88□□□□□ -0.51
AC005539.1-201ENST00000443768 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
AC005539.1-201ENST00000443768 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
AC005539.1-201ENST00000443768 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
AC005539.1-201ENST00000443768 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
AC005539.1-201ENST00000443768 DCBLD2Q96PD2 775 aa11.83□□□□□ -0.52
AC005539.1-201ENST00000443768 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
AC005539.1-201ENST00000443768 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
AC005539.1-201ENST00000443768 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
AC005539.1-201ENST00000443768 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
AC005539.1-201ENST00000443768 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
AC005539.1-201ENST00000443768 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
AC005539.1-201ENST00000443768 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
AC005539.1-201ENST00000443768 MIER1Q8N108 512 aa11.66□□□□□ -0.54
AC005539.1-201ENST00000443768 PLCD3Q8N3E9 789 aa11.64□□□□□ -0.55
AC005539.1-201ENST00000443768 FARP1Q9Y4F1 1045 aaPredicted RBP11.63□□□□□ -0.55
AC005539.1-201ENST00000443768 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms