RNA–Protein interactions for RNA: ENST00000442985.1

SPEN-203, Transcript of spen family transcriptional repressor, humanhuman

TSL 5

Gene SPEN, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-203ENST00000442985 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
SPEN-203ENST00000442985 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
SPEN-203ENST00000442985 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
SPEN-203ENST00000442985 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
SPEN-203ENST00000442985 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
SPEN-203ENST00000442985 FOXD1Q16676 465 aa15.1■□□□□ 0.01
SPEN-203ENST00000442985 ADRA2BP18089 450 aa14.5□□□□□ -0.09
SPEN-203ENST00000442985 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
SPEN-203ENST00000442985 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
SPEN-203ENST00000442985 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
SPEN-203ENST00000442985 MSH5O43196 834 aa14.13□□□□□ -0.15
SPEN-203ENST00000442985 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
SPEN-203ENST00000442985 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
SPEN-203ENST00000442985 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
SPEN-203ENST00000442985 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
SPEN-203ENST00000442985 KCNA4P22459 653 aa13.2□□□□□ -0.3
SPEN-203ENST00000442985 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SPEN-203ENST00000442985 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
SPEN-203ENST00000442985 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
SPEN-203ENST00000442985 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
SPEN-203ENST00000442985 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
SPEN-203ENST00000442985 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
SPEN-203ENST00000442985 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
SPEN-203ENST00000442985 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
SPEN-203ENST00000442985 EHMT2Q96KQ7 1210 aa12.29□□□□□ -0.44
SPEN-203ENST00000442985 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
SPEN-203ENST00000442985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPEN-203ENST00000442985 SLC4A2P04920 1241 aa12.17□□□□□ -0.46
SPEN-203ENST00000442985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.12□□□□□ -0.47
SPEN-203ENST00000442985 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
SPEN-203ENST00000442985 HNRNPUL2Q1KMD3 747 aaKnown RBP12.12□□□□□ -0.47
SPEN-203ENST00000442985 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
SPEN-203ENST00000442985 ZBTB22O15209 634 aa12.07□□□□□ -0.48
SPEN-203ENST00000442985 NISCHQ9Y2I1 1504 aa12.06□□□□□ -0.48
SPEN-203ENST00000442985 APLP2Q06481 763 aa12.05□□□□□ -0.48
SPEN-203ENST00000442985 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
SPEN-203ENST00000442985 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
SPEN-203ENST00000442985 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
SPEN-203ENST00000442985 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
SPEN-203ENST00000442985 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
SPEN-203ENST00000442985 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
SPEN-203ENST00000442985 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
SPEN-203ENST00000442985 CAPN15O75808 1086 aa11.65□□□□□ -0.54
SPEN-203ENST00000442985 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
SPEN-203ENST00000442985 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
SPEN-203ENST00000442985 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
SPEN-203ENST00000442985 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
SPEN-203ENST00000442985 DSG3P32926 999 aa11.4□□□□□ -0.58
SPEN-203ENST00000442985 POLA2Q14181 598 aa11.39□□□□□ -0.59
SPEN-203ENST00000442985 FBLN2P98095 1184 aa11.35□□□□□ -0.59
SPEN-203ENST00000442985 ABCB7O75027 752 aa11.33□□□□□ -0.6
SPEN-203ENST00000442985 POTEHQ6S545 545 aa11.19□□□□□ -0.62
SPEN-203ENST00000442985 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
SPEN-203ENST00000442985 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
SPEN-203ENST00000442985 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
SPEN-203ENST00000442985 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
SPEN-203ENST00000442985 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
SPEN-203ENST00000442985 FKBP8Q14318 412 aa11.01□□□□□ -0.65
SPEN-203ENST00000442985 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
SPEN-203ENST00000442985 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
SPEN-203ENST00000442985 ABCC9O60706 1549 aa10.99□□□□□ -0.65
SPEN-203ENST00000442985 ZNF692Q9BU19 519 aaPredicted RBP10.93□□□□□ -0.66
SPEN-203ENST00000442985 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
SPEN-203ENST00000442985 AKT1S1Q96B36 256 aa10.86□□□□□ -0.67
SPEN-203ENST00000442985 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
SPEN-203ENST00000442985 PROM2Q8N271 834 aa10.82□□□□□ -0.68
SPEN-203ENST00000442985 FBXO3Q9UK99 471 aa10.8□□□□□ -0.68
SPEN-203ENST00000442985 PABPN1Q86U42 306 aaKnown RBP eCLIP10.76□□□□□ -0.69
SPEN-203ENST00000442985 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
SPEN-203ENST00000442985 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
SPEN-203ENST00000442985 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
SPEN-203ENST00000442985 PLEKHG5O94827 1062 aa10.58□□□□□ -0.72
SPEN-203ENST00000442985 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
SPEN-203ENST00000442985 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
SPEN-203ENST00000442985 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
SPEN-203ENST00000442985 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
SPEN-203ENST00000442985 ZBTB47Q9UFB7 747 aaPredicted RBP10.5□□□□□ -0.73
SPEN-203ENST00000442985 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.73
SPEN-203ENST00000442985 CHRDL2Q6WN34 429 aa10.44□□□□□ -0.74
SPEN-203ENST00000442985 MIER1Q8N108 512 aa10.42□□□□□ -0.74
SPEN-203ENST00000442985 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
SPEN-203ENST00000442985 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
SPEN-203ENST00000442985 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.76
SPEN-203ENST00000442985 NPM1P06748 294 aaKnown RBP eCLIP10.32□□□□□ -0.76
SPEN-203ENST00000442985 CREBZFQ9NS37 354 aa10.3□□□□□ -0.76
SPEN-203ENST00000442985 SPOCK2Q92563 424 aa10.28□□□□□ -0.76
SPEN-203ENST00000442985 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
SPEN-203ENST00000442985 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
SPEN-203ENST00000442985 IFNLR1Q8IU57 520 aaPredicted RBP10.27□□□□□ -0.77
SPEN-203ENST00000442985 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
SPEN-203ENST00000442985 NACADO15069 1562 aa10.26□□□□□ -0.77
SPEN-203ENST00000442985 DCAF8L2P0C7V8 631 aa10.23□□□□□ -0.77
SPEN-203ENST00000442985 FARP1Q9Y4F1 1045 aaPredicted RBP10.21□□□□□ -0.77
SPEN-203ENST00000442985 UNC13AQ9UPW8 1703 aa10.19□□□□□ -0.78
SPEN-203ENST00000442985 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
SPEN-203ENST00000442985 MNX1P50219 401 aaPredicted RBP10.17□□□□□ -0.78
SPEN-203ENST00000442985 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
SPEN-203ENST00000442985 PAK3O75914 559 aaPredicted RBP10.16□□□□□ -0.78
SPEN-203ENST00000442985 GSE1Q14687 1217 aa10.16□□□□□ -0.78
SPEN-203ENST00000442985 TRIM41Q8WV44 630 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms