RNA–Protein interactions for RNA: ENST00000442921.6

PTPRO-203, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-203ENST00000442921 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
PTPRO-203ENST00000442921 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
PTPRO-203ENST00000442921 PHF23Q9BUL5 403 aaPredicted RBP13.35□□□□□ -0.27
PTPRO-203ENST00000442921 SENP3Q9H4L4 574 aaPredicted RBP12.29□□□□□ -0.44
PTPRO-203ENST00000442921 PLPPR3Q6T4P5 718 aa12.16□□□□□ -0.46
PTPRO-203ENST00000442921 ADRA2BP18089 450 aa11.93□□□□□ -0.5
PTPRO-203ENST00000442921 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
PTPRO-203ENST00000442921 FOXD1Q16676 465 aa11.65□□□□□ -0.54
PTPRO-203ENST00000442921 EHMT2Q96KQ7 1210 aa11.48□□□□□ -0.57
PTPRO-203ENST00000442921 KCNA4P22459 653 aa11.47□□□□□ -0.57
PTPRO-203ENST00000442921 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
PTPRO-203ENST00000442921 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
PTPRO-203ENST00000442921 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
PTPRO-203ENST00000442921 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
PTPRO-203ENST00000442921 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
PTPRO-203ENST00000442921 MAPK8IP2Q13387 824 aaPredicted RBP10.64□□□□□ -0.71
PTPRO-203ENST00000442921 ZBTB22O15209 634 aa10.63□□□□□ -0.71
PTPRO-203ENST00000442921 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
PTPRO-203ENST00000442921 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.76
PTPRO-203ENST00000442921 SCAF1Q9H7N4 1312 aaKnown RBP10.19□□□□□ -0.78
PTPRO-203ENST00000442921 MSH5O43196 834 aa10.16□□□□□ -0.78
PTPRO-203ENST00000442921 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
PTPRO-203ENST00000442921 SLC4A2P04920 1241 aa10.04□□□□□ -0.8
PTPRO-203ENST00000442921 RNF216Q9NWF9 866 aaPredicted RBP9.98□□□□□ -0.81
PTPRO-203ENST00000442921 DCAF8L1A6NGE4 600 aa9.93□□□□□ -0.82
PTPRO-203ENST00000442921 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
PTPRO-203ENST00000442921 DMRT2Q9Y5R5 561 aa9.9□□□□□ -0.83
PTPRO-203ENST00000442921 NISCHQ9Y2I1 1504 aa9.88□□□□□ -0.83
PTPRO-203ENST00000442921 HOXD11P31277 338 aaPredicted RBP9.82□□□□□ -0.84
PTPRO-203ENST00000442921 FKBP8Q14318 412 aa9.81□□□□□ -0.84
PTPRO-203ENST00000442921 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
PTPRO-203ENST00000442921 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
PTPRO-203ENST00000442921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTPRO-203ENST00000442921 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
PTPRO-203ENST00000442921 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
PTPRO-203ENST00000442921 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
PTPRO-203ENST00000442921 MYT1Q01538 1121 aa9.48□□□□□ -0.89
PTPRO-203ENST00000442921 AMER1Q5JTC6 1135 aaPredicted RBP9.4□□□□□ -0.9
PTPRO-203ENST00000442921 PELP1Q8IZL8 1130 aaKnown RBP9.4□□□□□ -0.9
PTPRO-203ENST00000442921 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
PTPRO-203ENST00000442921 SPINK5Q9NQ38 1064 aaPredicted RBP9.34□□□□□ -0.91
PTPRO-203ENST00000442921 TTBK1Q5TCY1 1321 aaPredicted RBP9.34□□□□□ -0.91
PTPRO-203ENST00000442921 TRHP20396 242 aaPredicted RBP9.32□□□□□ -0.92
PTPRO-203ENST00000442921 MKRN4PQ13434 485 aaPredicted RBP9.27□□□□□ -0.93
PTPRO-203ENST00000442921 ZNF219Q9P2Y4 722 aaPredicted RBP9.27□□□□□ -0.93
PTPRO-203ENST00000442921 SAMD1Q6SPF0 538 aaPredicted RBP9.23□□□□□ -0.93
PTPRO-203ENST00000442921 ABCB7O75027 752 aa9.22□□□□□ -0.93
PTPRO-203ENST00000442921 DCAF8L2P0C7V8 631 aa9.2□□□□□ -0.94
PTPRO-203ENST00000442921 POLA2Q14181 598 aa9.18□□□□□ -0.94
PTPRO-203ENST00000442921 SPDYE4A6NLX3 237 aa9.17□□□□□ -0.94
PTPRO-203ENST00000442921 CAPN15O75808 1086 aa9.15□□□□□ -0.95
PTPRO-203ENST00000442921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.13□□□□□ -0.95
PTPRO-203ENST00000442921 HNRNPUL2Q1KMD3 747 aaKnown RBP9.13□□□□□ -0.95
PTPRO-203ENST00000442921 IFNLR1Q8IU57 520 aaPredicted RBP9.07□□□□□ -0.96
PTPRO-203ENST00000442921 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
PTPRO-203ENST00000442921 RNF39Q9H2S5 420 aa8.95□□□□□ -0.98
PTPRO-203ENST00000442921 OSCARQ8IYS5 282 aa8.94□□□□□ -0.98
PTPRO-203ENST00000442921 PKD2Q13563 968 aa8.91□□□□□ -0.98
PTPRO-203ENST00000442921 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
PTPRO-203ENST00000442921 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
PTPRO-203ENST00000442921 FBLN2P98095 1184 aa8.9□□□□□ -0.99
PTPRO-203ENST00000442921 PLCB2Q00722 1185 aa8.86□□□□□ -0.99
PTPRO-203ENST00000442921 FBXO3Q9UK99 471 aa8.86□□□□□ -0.99
PTPRO-203ENST00000442921 KLHL34Q8N239 644 aa8.86□□□□□ -0.99
PTPRO-203ENST00000442921 APLP2Q06481 763 aa8.85□□□□□ -0.99
PTPRO-203ENST00000442921 PROM2Q8N271 834 aa8.82□□□□□ -1
PTPRO-203ENST00000442921 POTEDQ86YR6 584 aa8.8□□□□□ -1
PTPRO-203ENST00000442921 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
PTPRO-203ENST00000442921 ZNF692Q9BU19 519 aaPredicted RBP8.79□□□□□ -1
PTPRO-203ENST00000442921 ERICH6Q7L0X2 663 aa8.79□□□□□ -1
PTPRO-203ENST00000442921 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
PTPRO-203ENST00000442921 RGL2O15211 777 aa8.77□□□□□ -1.01
PTPRO-203ENST00000442921 PABPN1Q86U42 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPRO-203ENST00000442921 PLCD3Q8N3E9 789 aa8.76□□□□□ -1.01
PTPRO-203ENST00000442921 CFAP44Q96MT7 982 aa8.76□□□□□ -1.01
PTPRO-203ENST00000442921 DSG3P32926 999 aa8.75□□□□□ -1.01
PTPRO-203ENST00000442921 ECM2O94769 699 aaPredicted RBP8.72□□□□□ -1.01
PTPRO-203ENST00000442921 MIER1Q8N108 512 aa8.72□□□□□ -1.01
PTPRO-203ENST00000442921 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.01
PTPRO-203ENST00000442921 PAXIP1Q6ZW49 1069 aaPredicted RBP8.71□□□□□ -1.02
PTPRO-203ENST00000442921 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
PTPRO-203ENST00000442921 C1QBPQ07021 282 aaKnown RBP8.69□□□□□ -1.02
PTPRO-203ENST00000442921 CHGAP10645 457 aaKnown RBP8.64□□□□□ -1.03
PTPRO-203ENST00000442921 TSHZ2Q9NRE2 1034 aa8.63□□□□□ -1.03
PTPRO-203ENST00000442921 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
PTPRO-203ENST00000442921 RNF25Q96BH1 459 aaPredicted RBP8.58□□□□□ -1.04
PTPRO-203ENST00000442921 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
PTPRO-203ENST00000442921 TPRNQ4KMQ1 711 aa8.55□□□□□ -1.04
PTPRO-203ENST00000442921 CLEC11AQ9Y240 323 aa8.53□□□□□ -1.04
PTPRO-203ENST00000442921 ZBTB12Q9Y330 459 aaPredicted RBP8.52□□□□□ -1.05
PTPRO-203ENST00000442921 SPDYE2BA6NHP3 402 aa8.52□□□□□ -1.05
PTPRO-203ENST00000442921 SPDYE6P0CI01 402 aa8.52□□□□□ -1.05
PTPRO-203ENST00000442921 SPDYE2Q495Y8 402 aa8.52□□□□□ -1.05
PTPRO-203ENST00000442921 TAOK2Q9UL54 1235 aa8.52□□□□□ -1.05
PTPRO-203ENST00000442921 CACNB1Q02641 598 aaPredicted RBP8.51□□□□□ -1.05
PTPRO-203ENST00000442921 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
PTPRO-203ENST00000442921 CCDC180Q9P1Z9 1646 aa8.47□□□□□ -1.05
PTPRO-203ENST00000442921 BCANQ96GW7 911 aa8.45□□□□□ -1.06
PTPRO-203ENST00000442921 NKX1-1Q15270 411 aaPredicted RBP8.44□□□□□ -1.06
PTPRO-203ENST00000442921 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms