RNA–Protein interactions for RNA: ENST00000442587.1

RAD23B-204, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

TSL 2

Gene RAD23B, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-204ENST00000442587 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
RAD23B-204ENST00000442587 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
RAD23B-204ENST00000442587 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
RAD23B-204ENST00000442587 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
RAD23B-204ENST00000442587 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
RAD23B-204ENST00000442587 FOXD1Q16676 465 aa18.57■□□□□ 0.56
RAD23B-204ENST00000442587 ADRA2BP18089 450 aa18.04■□□□□ 0.48
RAD23B-204ENST00000442587 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
RAD23B-204ENST00000442587 PIAS4Q8N2W9 510 aaPredicted RBP17.62■□□□□ 0.41
RAD23B-204ENST00000442587 MSH5O43196 834 aa17.16■□□□□ 0.34
RAD23B-204ENST00000442587 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
RAD23B-204ENST00000442587 KCNA4P22459 653 aa16.73■□□□□ 0.27
RAD23B-204ENST00000442587 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
RAD23B-204ENST00000442587 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
RAD23B-204ENST00000442587 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
RAD23B-204ENST00000442587 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
RAD23B-204ENST00000442587 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
RAD23B-204ENST00000442587 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
RAD23B-204ENST00000442587 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
RAD23B-204ENST00000442587 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
RAD23B-204ENST00000442587 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
RAD23B-204ENST00000442587 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
RAD23B-204ENST00000442587 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
RAD23B-204ENST00000442587 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
RAD23B-204ENST00000442587 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
RAD23B-204ENST00000442587 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
RAD23B-204ENST00000442587 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
RAD23B-204ENST00000442587 ZBTB22O15209 634 aa15.35■□□□□ 0.05
RAD23B-204ENST00000442587 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
RAD23B-204ENST00000442587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
RAD23B-204ENST00000442587 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
RAD23B-204ENST00000442587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
RAD23B-204ENST00000442587 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
RAD23B-204ENST00000442587 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
RAD23B-204ENST00000442587 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
RAD23B-204ENST00000442587 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
RAD23B-204ENST00000442587 APLP2Q06481 763 aa14.75□□□□□ -0.05
RAD23B-204ENST00000442587 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
RAD23B-204ENST00000442587 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
RAD23B-204ENST00000442587 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
RAD23B-204ENST00000442587 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
RAD23B-204ENST00000442587 CAPN15O75808 1086 aa14.34□□□□□ -0.11
RAD23B-204ENST00000442587 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
RAD23B-204ENST00000442587 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
RAD23B-204ENST00000442587 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
RAD23B-204ENST00000442587 POLA2Q14181 598 aa14.14□□□□□ -0.15
RAD23B-204ENST00000442587 FBLN2P98095 1184 aa14.08□□□□□ -0.16
RAD23B-204ENST00000442587 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
RAD23B-204ENST00000442587 FKBP8Q14318 412 aa14.05□□□□□ -0.16
RAD23B-204ENST00000442587 ABCB7O75027 752 aa14.02□□□□□ -0.17
RAD23B-204ENST00000442587 DSG3P32926 999 aa14.02□□□□□ -0.17
RAD23B-204ENST00000442587 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
RAD23B-204ENST00000442587 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
RAD23B-204ENST00000442587 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
RAD23B-204ENST00000442587 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
RAD23B-204ENST00000442587 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
RAD23B-204ENST00000442587 PROM2Q8N271 834 aa13.63□□□□□ -0.23
RAD23B-204ENST00000442587 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
RAD23B-204ENST00000442587 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
RAD23B-204ENST00000442587 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
RAD23B-204ENST00000442587 SSUH2Q9Y2M2 353 aa13.52□□□□□ -0.25
RAD23B-204ENST00000442587 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
RAD23B-204ENST00000442587 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
RAD23B-204ENST00000442587 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
RAD23B-204ENST00000442587 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
RAD23B-204ENST00000442587 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
RAD23B-204ENST00000442587 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
RAD23B-204ENST00000442587 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
RAD23B-204ENST00000442587 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
RAD23B-204ENST00000442587 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
RAD23B-204ENST00000442587 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
RAD23B-204ENST00000442587 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
RAD23B-204ENST00000442587 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
RAD23B-204ENST00000442587 MIER1Q8N108 512 aa13.1□□□□□ -0.31
RAD23B-204ENST00000442587 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
RAD23B-204ENST00000442587 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
RAD23B-204ENST00000442587 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
RAD23B-204ENST00000442587 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
RAD23B-204ENST00000442587 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
RAD23B-204ENST00000442587 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
RAD23B-204ENST00000442587 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
RAD23B-204ENST00000442587 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAD23B-204ENST00000442587 PKD2Q13563 968 aa12.76□□□□□ -0.37
RAD23B-204ENST00000442587 GSE1Q14687 1217 aa12.73□□□□□ -0.37
RAD23B-204ENST00000442587 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
RAD23B-204ENST00000442587 CHRDL2Q6WN34 429 aa12.72□□□□□ -0.37
RAD23B-204ENST00000442587 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
RAD23B-204ENST00000442587 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
RAD23B-204ENST00000442587 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
RAD23B-204ENST00000442587 NUBP1P53384 320 aa12.7□□□□□ -0.38
RAD23B-204ENST00000442587 ECM2O94769 699 aaPredicted RBP12.69□□□□□ -0.38
RAD23B-204ENST00000442587 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
RAD23B-204ENST00000442587 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
RAD23B-204ENST00000442587 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
RAD23B-204ENST00000442587 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
RAD23B-204ENST00000442587 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
RAD23B-204ENST00000442587 DCAF8L2P0C7V8 631 aa12.6□□□□□ -0.39
RAD23B-204ENST00000442587 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
RAD23B-204ENST00000442587 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
RAD23B-204ENST00000442587 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms