RNA–Protein interactions for RNA: ENST00000442543.1

MTCO2P3-201, Transcript of MT-CO2 pseudogene 3, humanhuman

BASIC

Gene MTCO2P3, Length 421 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCO2P3-201ENST00000442543 AEBP2Q6ZN18 517 aaPredicted RBP35.58■■■■□ 3.29
MTCO2P3-201ENST00000442543 CHIC1Q5VXU3 224 aa33.29■■■□□ 2.92
MTCO2P3-201ENST00000442543 SENP3Q9H4L4 574 aaPredicted RBP30.28■■■□□ 2.44
MTCO2P3-201ENST00000442543 PHF23Q9BUL5 403 aaPredicted RBP29.89■■■□□ 2.38
MTCO2P3-201ENST00000442543 FOXD1Q16676 465 aa28.37■■■□□ 2.13
MTCO2P3-201ENST00000442543 POTEDQ86YR6 584 aa26.81■■□□□ 1.88
MTCO2P3-201ENST00000442543 MSH5O43196 834 aa26.61■■□□□ 1.85
MTCO2P3-201ENST00000442543 PLPPR3Q6T4P5 718 aa26.34■■□□□ 1.81
MTCO2P3-201ENST00000442543 PIAS4Q8N2W9 510 aaPredicted RBP26.32■■□□□ 1.8
MTCO2P3-201ENST00000442543 PPP6R1Q9UPN7 881 aa26.25■■□□□ 1.79
MTCO2P3-201ENST00000442543 ADRA2BP18089 450 aa26.08■■□□□ 1.77
MTCO2P3-201ENST00000442543 MAPK8IP2Q13387 824 aaPredicted RBP24.12■■□□□ 1.45
MTCO2P3-201ENST00000442543 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
MTCO2P3-201ENST00000442543 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
MTCO2P3-201ENST00000442543 CACNB1Q02641 598 aaPredicted RBP23.1■■□□□ 1.29
MTCO2P3-201ENST00000442543 PPP4R3CPQ6ZMV5 832 aa23.07■■□□□ 1.28
MTCO2P3-201ENST00000442543 HOXD11P31277 338 aaPredicted RBP22.96■■□□□ 1.27
MTCO2P3-201ENST00000442543 DCAF8L1A6NGE4 600 aa22.92■■□□□ 1.26
MTCO2P3-201ENST00000442543 RNF39Q9H2S5 420 aa22.74■■□□□ 1.23
MTCO2P3-201ENST00000442543 CNKSR2Q8WXI2 1034 aa22.71■■□□□ 1.23
MTCO2P3-201ENST00000442543 RNF216Q9NWF9 866 aaPredicted RBP22.63■■□□□ 1.21
MTCO2P3-201ENST00000442543 C1QBPQ07021 282 aaKnown RBP22.33■■□□□ 1.17
MTCO2P3-201ENST00000442543 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
MTCO2P3-201ENST00000442543 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
MTCO2P3-201ENST00000442543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.77■■□□□ 1.08
MTCO2P3-201ENST00000442543 NPM3O75607 178 aaKnown RBP21.76■■□□□ 1.07
MTCO2P3-201ENST00000442543 U3KPZ7 1027 aaPredicted RBP21.37■■□□□ 1.01
MTCO2P3-201ENST00000442543 SPINK5Q9NQ38 1064 aaPredicted RBP21.2■□□□□ 0.98
MTCO2P3-201ENST00000442543 DSG3P32926 999 aa21.15■□□□□ 0.98
MTCO2P3-201ENST00000442543 CAPN15O75808 1086 aa21.08■□□□□ 0.97
MTCO2P3-201ENST00000442543 KCNA4P22459 653 aa20.96■□□□□ 0.95
MTCO2P3-201ENST00000442543 SLC4A2P04920 1241 aa20.94■□□□□ 0.94
MTCO2P3-201ENST00000442543 POTEHQ6S545 545 aa20.89■□□□□ 0.93
MTCO2P3-201ENST00000442543 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
MTCO2P3-201ENST00000442543 ABCB7O75027 752 aa20.6■□□□□ 0.89
MTCO2P3-201ENST00000442543 ZNF219Q9P2Y4 722 aaPredicted RBP20.57■□□□□ 0.88
MTCO2P3-201ENST00000442543 APLP2Q06481 763 aa20.53■□□□□ 0.88
MTCO2P3-201ENST00000442543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
MTCO2P3-201ENST00000442543 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
MTCO2P3-201ENST00000442543 SAMD1Q6SPF0 538 aaPredicted RBP20.36■□□□□ 0.85
MTCO2P3-201ENST00000442543 RBM42Q9BTD8 480 aaKnown RBP20.08■□□□□ 0.81
MTCO2P3-201ENST00000442543 MYCNP04198 464 aaPredicted RBP20.06■□□□□ 0.8
MTCO2P3-201ENST00000442543 POLA2Q14181 598 aa20.04■□□□□ 0.8
MTCO2P3-201ENST00000442543 CHRDL2Q6WN34 429 aa19.88■□□□□ 0.77
MTCO2P3-201ENST00000442543 ATF5Q9Y2D1 282 aaPredicted RBP19.76■□□□□ 0.75
MTCO2P3-201ENST00000442543 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
MTCO2P3-201ENST00000442543 SLC4A1APQ9BWU0 796 aaKnown RBP19.62■□□□□ 0.73
MTCO2P3-201ENST00000442543 AKT1S1Q96B36 256 aa19.57■□□□□ 0.72
MTCO2P3-201ENST00000442543 ZBTB12Q9Y330 459 aaPredicted RBP19.49■□□□□ 0.71
MTCO2P3-201ENST00000442543 REM2Q8IYK8 340 aaPredicted RBP19.43■□□□□ 0.7
MTCO2P3-201ENST00000442543 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
MTCO2P3-201ENST00000442543 SP7Q8TDD2 431 aaPredicted RBP19.37■□□□□ 0.69
MTCO2P3-201ENST00000442543 PIP4P2Q8N4L2 257 aa19.35■□□□□ 0.69
MTCO2P3-201ENST00000442543 ZBTB22O15209 634 aa19.32■□□□□ 0.68
MTCO2P3-201ENST00000442543 PITPNM1O00562 1244 aa19.24■□□□□ 0.67
MTCO2P3-201ENST00000442543 FXR2P51116 673 aaKnown RBP eCLIP19.17■□□□□ 0.66
MTCO2P3-201ENST00000442543 ATXN8OSP0DMR3 200 aa19.06■□□□□ 0.64
MTCO2P3-201ENST00000442543 HAX1O00165 279 aa19.05■□□□□ 0.64
MTCO2P3-201ENST00000442543 EVX2Q03828 476 aa18.93■□□□□ 0.62
MTCO2P3-201ENST00000442543 SPDYE2BA6NHP3 402 aa18.92■□□□□ 0.62
MTCO2P3-201ENST00000442543 SPDYE6P0CI01 402 aa18.92■□□□□ 0.62
MTCO2P3-201ENST00000442543 SPDYE2Q495Y8 402 aa18.92■□□□□ 0.62
MTCO2P3-201ENST00000442543 FBLN2P98095 1184 aa18.84■□□□□ 0.61
MTCO2P3-201ENST00000442543 MKRN4PQ13434 485 aaPredicted RBP18.82■□□□□ 0.6
MTCO2P3-201ENST00000442543 PRKAR2AP13861 404 aaKnown RBP18.7■□□□□ 0.58
MTCO2P3-201ENST00000442543 SSUH2Q9Y2M2 353 aa18.68■□□□□ 0.58
MTCO2P3-201ENST00000442543 SPDYE1Q8NFV5 336 aaPredicted RBP18.67■□□□□ 0.58
MTCO2P3-201ENST00000442543 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
MTCO2P3-201ENST00000442543 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
MTCO2P3-201ENST00000442543 C19orf67A6NJJ6 358 aa18.57■□□□□ 0.56
MTCO2P3-201ENST00000442543 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
MTCO2P3-201ENST00000442543 GABBR2O75899 941 aa18.4■□□□□ 0.54
MTCO2P3-201ENST00000442543 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
MTCO2P3-201ENST00000442543 PRR29P0C7W0 189 aa18.3■□□□□ 0.52
MTCO2P3-201ENST00000442543 LHX8Q68G74 356 aa18.15■□□□□ 0.5
MTCO2P3-201ENST00000442543 FARP1Q9Y4F1 1045 aaPredicted RBP18.09■□□□□ 0.49
MTCO2P3-201ENST00000442543 POTEIP0CG38 1075 aa18.07■□□□□ 0.48
MTCO2P3-201ENST00000442543 CD44P16070 742 aaKnown RBP18.06■□□□□ 0.48
MTCO2P3-201ENST00000442543 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
MTCO2P3-201ENST00000442543 CLCN6P51797 869 aa17.86■□□□□ 0.45
MTCO2P3-201ENST00000442543 CREBZFQ9NS37 354 aa17.83■□□□□ 0.44
MTCO2P3-201ENST00000442543 ZNF579Q8NAF0 562 aaKnown RBP17.79■□□□□ 0.44
MTCO2P3-201ENST00000442543 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
MTCO2P3-201ENST00000442543 DCBLD2Q96PD2 775 aa17.72■□□□□ 0.43
MTCO2P3-201ENST00000442543 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
MTCO2P3-201ENST00000442543 GALR2O43603 387 aaPredicted RBP17.64■□□□□ 0.41
MTCO2P3-201ENST00000442543 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
MTCO2P3-201ENST00000442543 MNX1P50219 401 aaPredicted RBP17.52■□□□□ 0.4
MTCO2P3-201ENST00000442543 PHF12Q96QT6 1004 aa17.5■□□□□ 0.39
MTCO2P3-201ENST00000442543 POTEB2H3BUK9 544 aa17.48■□□□□ 0.39
MTCO2P3-201ENST00000442543 OTUD5Q96G74 571 aa17.46■□□□□ 0.39
MTCO2P3-201ENST00000442543 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
MTCO2P3-201ENST00000442543 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
MTCO2P3-201ENST00000442543 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
MTCO2P3-201ENST00000442543 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
MTCO2P3-201ENST00000442543 PLSCR2Q9NRY7 297 aa17.28■□□□□ 0.36
MTCO2P3-201ENST00000442543 ASTLQ6HA08 431 aaPredicted RBP17.24■□□□□ 0.35
MTCO2P3-201ENST00000442543 MS4A3Q96HJ5 214 aa17.24■□□□□ 0.35
MTCO2P3-201ENST00000442543 PROM2Q8N271 834 aa17.21■□□□□ 0.35
MTCO2P3-201ENST00000442543 ATMINO43313 823 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms