RNA–Protein interactions for RNA: ENST00000441022.1

LBR-206, Transcript of lamin B receptor, humanhuman

TSL 2

Gene LBR, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-206ENST00000441022 AEBP2Q6ZN18 517 aaPredicted RBP25.04■■□□□ 1.6
LBR-206ENST00000441022 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
LBR-206ENST00000441022 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
LBR-206ENST00000441022 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
LBR-206ENST00000441022 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
LBR-206ENST00000441022 FOXD1Q16676 465 aa19.72■□□□□ 0.75
LBR-206ENST00000441022 POTEDQ86YR6 584 aa19.02■□□□□ 0.64
LBR-206ENST00000441022 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
LBR-206ENST00000441022 ADRA2BP18089 450 aa19■□□□□ 0.63
LBR-206ENST00000441022 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
LBR-206ENST00000441022 MSH5O43196 834 aa18.45■□□□□ 0.54
LBR-206ENST00000441022 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
LBR-206ENST00000441022 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
LBR-206ENST00000441022 KCNA4P22459 653 aa17.3■□□□□ 0.36
LBR-206ENST00000441022 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
LBR-206ENST00000441022 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
LBR-206ENST00000441022 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
LBR-206ENST00000441022 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
LBR-206ENST00000441022 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
LBR-206ENST00000441022 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
LBR-206ENST00000441022 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
LBR-206ENST00000441022 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
LBR-206ENST00000441022 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
LBR-206ENST00000441022 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
LBR-206ENST00000441022 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
LBR-206ENST00000441022 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
LBR-206ENST00000441022 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
LBR-206ENST00000441022 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
LBR-206ENST00000441022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
LBR-206ENST00000441022 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
LBR-206ENST00000441022 ZBTB22O15209 634 aa15.88■□□□□ 0.13
LBR-206ENST00000441022 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
LBR-206ENST00000441022 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
LBR-206ENST00000441022 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
LBR-206ENST00000441022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
LBR-206ENST00000441022 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
LBR-206ENST00000441022 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
LBR-206ENST00000441022 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
LBR-206ENST00000441022 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
LBR-206ENST00000441022 APLP2Q06481 763 aa15.44■□□□□ 0.06
LBR-206ENST00000441022 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
LBR-206ENST00000441022 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
LBR-206ENST00000441022 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
LBR-206ENST00000441022 CAPN15O75808 1086 aa15.13■□□□□ 0.01
LBR-206ENST00000441022 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
LBR-206ENST00000441022 DSG3P32926 999 aa14.86□□□□□ -0.03
LBR-206ENST00000441022 POLA2Q14181 598 aa14.85□□□□□ -0.03
LBR-206ENST00000441022 ABCB7O75027 752 aa14.8□□□□□ -0.04
LBR-206ENST00000441022 POTEHQ6S545 545 aa14.79□□□□□ -0.04
LBR-206ENST00000441022 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
LBR-206ENST00000441022 FBLN2P98095 1184 aa14.67□□□□□ -0.06
LBR-206ENST00000441022 MKRN4PQ13434 485 aaPredicted RBP14.55□□□□□ -0.08
LBR-206ENST00000441022 FKBP8Q14318 412 aa14.38□□□□□ -0.11
LBR-206ENST00000441022 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
LBR-206ENST00000441022 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
LBR-206ENST00000441022 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
LBR-206ENST00000441022 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
LBR-206ENST00000441022 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
LBR-206ENST00000441022 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
LBR-206ENST00000441022 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
LBR-206ENST00000441022 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
LBR-206ENST00000441022 PROM2Q8N271 834 aa14.11□□□□□ -0.15
LBR-206ENST00000441022 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
LBR-206ENST00000441022 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
LBR-206ENST00000441022 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
LBR-206ENST00000441022 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
LBR-206ENST00000441022 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
LBR-206ENST00000441022 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
LBR-206ENST00000441022 CHRDL2Q6WN34 429 aa13.78□□□□□ -0.2
LBR-206ENST00000441022 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
LBR-206ENST00000441022 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
LBR-206ENST00000441022 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
LBR-206ENST00000441022 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
LBR-206ENST00000441022 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
LBR-206ENST00000441022 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
LBR-206ENST00000441022 MIER1Q8N108 512 aa13.57□□□□□ -0.24
LBR-206ENST00000441022 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
LBR-206ENST00000441022 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
LBR-206ENST00000441022 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
LBR-206ENST00000441022 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
LBR-206ENST00000441022 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
LBR-206ENST00000441022 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
LBR-206ENST00000441022 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
LBR-206ENST00000441022 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
LBR-206ENST00000441022 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
LBR-206ENST00000441022 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
LBR-206ENST00000441022 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
LBR-206ENST00000441022 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
LBR-206ENST00000441022 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
LBR-206ENST00000441022 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
LBR-206ENST00000441022 HAX1O00165 279 aa13.26□□□□□ -0.29
LBR-206ENST00000441022 NUBP1P53384 320 aa13.2□□□□□ -0.3
LBR-206ENST00000441022 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
LBR-206ENST00000441022 GSE1Q14687 1217 aa13.15□□□□□ -0.3
LBR-206ENST00000441022 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
LBR-206ENST00000441022 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
LBR-206ENST00000441022 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
LBR-206ENST00000441022 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
LBR-206ENST00000441022 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
LBR-206ENST00000441022 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms