RNA–Protein interactions for RNA: ENST00000440756.4

PSD3-204, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PSD3, Length 11,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-204ENST00000440756 NISCHQ9Y2I1 1504 aa12.15□□□□□ -0.47
PSD3-204ENST00000440756 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.69
PSD3-204ENST00000440756 ZCCHC6Q5VYS8 1495 aaKnown RBP10.27□□□□□ -0.76
PSD3-204ENST00000440756 DCAF1Q9Y4B6 1507 aa10.12□□□□□ -0.79
PSD3-204ENST00000440756 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
PSD3-204ENST00000440756 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
PSD3-204ENST00000440756 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
PSD3-204ENST00000440756 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
PSD3-204ENST00000440756 NACADO15069 1562 aa9.83□□□□□ -0.84
PSD3-204ENST00000440756 ABCC9O60706 1549 aa9.83□□□□□ -0.84
PSD3-204ENST00000440756 SCRIBQ14160 1630 aa9.77□□□□□ -0.85
PSD3-204ENST00000440756 RB1CC1Q8TDY2 1594 aa9.71□□□□□ -0.86
PSD3-204ENST00000440756 UNC13AQ9UPW8 1703 aa9.56□□□□□ -0.88
PSD3-204ENST00000440756 BAZ1AQ9NRL2 1556 aaPredicted RBP9.5□□□□□ -0.89
PSD3-204ENST00000440756 CHIC1Q5VXU3 224 aa9.49□□□□□ -0.89
PSD3-204ENST00000440756 RSF1Q96T23 1441 aaPredicted RBP9.43□□□□□ -0.9
PSD3-204ENST00000440756 SMARCA4P51532 1647 aa9.41□□□□□ -0.9
PSD3-204ENST00000440756 WIZO95785 1651 aa9.37□□□□□ -0.91
PSD3-204ENST00000440756 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
PSD3-204ENST00000440756 TRIM41Q8WV44 630 aa9.33□□□□□ -0.92
PSD3-204ENST00000440756 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
PSD3-204ENST00000440756 HRCP23327 699 aa9.28□□□□□ -0.92
PSD3-204ENST00000440756 SMARCA2P51531 1590 aa9.26□□□□□ -0.93
PSD3-204ENST00000440756 CECR2Q9BXF3 1484 aa9.25□□□□□ -0.93
PSD3-204ENST00000440756 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
PSD3-204ENST00000440756 PRDM2Q13029 1718 aa9.23□□□□□ -0.93
PSD3-204ENST00000440756 PEG3Q9GZU2 1588 aa9.22□□□□□ -0.93
PSD3-204ENST00000440756 PELP1Q8IZL8 1130 aaKnown RBP9.2□□□□□ -0.94
PSD3-204ENST00000440756 EIF4G1Q04637 1599 aaKnown RBP9.19□□□□□ -0.94
PSD3-204ENST00000440756 EEA1Q15075 1411 aa9.18□□□□□ -0.94
PSD3-204ENST00000440756 PCGF6Q9BYE7 350 aa9.18□□□□□ -0.94
PSD3-204ENST00000440756 ZEB1P37275 1124 aaPredicted RBP9.16□□□□□ -0.94
PSD3-204ENST00000440756 TRIM26Q12899 539 aaPredicted RBP9.15□□□□□ -0.94
PSD3-204ENST00000440756 BICRAQ9NZM4 1560 aa9.15□□□□□ -0.94
PSD3-204ENST00000440756 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.94
PSD3-204ENST00000440756 CCDC88BA6NC98 1476 aa9.1□□□□□ -0.95
PSD3-204ENST00000440756 HMGXB3Q12766 1538 aa9.09□□□□□ -0.95
PSD3-204ENST00000440756 ABCC8Q09428 1581 aa9.06□□□□□ -0.96
PSD3-204ENST00000440756 FAM9AQ8IZU1 332 aaPredicted RBP9.05□□□□□ -0.96
PSD3-204ENST00000440756 KIF21BO75037 1637 aa9.04□□□□□ -0.96
PSD3-204ENST00000440756 LOC105371045A0A1W2PR82 267 aa9.04□□□□□ -0.96
PSD3-204ENST00000440756 WRNQ14191 1432 aaPredicted RBP eCLIP9.02□□□□□ -0.97
PSD3-204ENST00000440756 GOLGA3Q08378 1498 aa9.01□□□□□ -0.97
PSD3-204ENST00000440756 CEP164Q9UPV0 1460 aa8.99□□□□□ -0.97
PSD3-204ENST00000440756 SCAF1Q9H7N4 1312 aaKnown RBP8.99□□□□□ -0.97
PSD3-204ENST00000440756 BIVM-ERCC5R4GMW8 1640 aa8.99□□□□□ -0.97
PSD3-204ENST00000440756 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
PSD3-204ENST00000440756 ATAD2BQ9ULI0 1458 aa8.99□□□□□ -0.97
PSD3-204ENST00000440756 PABPN1Q86U42 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
PSD3-204ENST00000440756 APLP2Q06481 763 aa8.96□□□□□ -0.97
PSD3-204ENST00000440756 CEP162Q5TB80 1403 aa8.95□□□□□ -0.98
PSD3-204ENST00000440756 SYNJ1O43426 1573 aa8.94□□□□□ -0.98
PSD3-204ENST00000440756 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
PSD3-204ENST00000440756 TNIKQ9UKE5 1360 aa8.93□□□□□ -0.98
PSD3-204ENST00000440756 ERICH3Q5RHP9 1530 aa8.92□□□□□ -0.98
PSD3-204ENST00000440756 EHMT2Q96KQ7 1210 aa8.89□□□□□ -0.99
PSD3-204ENST00000440756 NCAPD3P42695 1498 aa8.89□□□□□ -0.99
PSD3-204ENST00000440756 CLIP1P30622 1438 aa8.88□□□□□ -0.99
PSD3-204ENST00000440756 CSRNP3Q8WYN3 585 aa8.86□□□□□ -0.99
PSD3-204ENST00000440756 SOGA1O94964 1423 aa8.84□□□□□ -0.99
PSD3-204ENST00000440756 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
PSD3-204ENST00000440756 MYT1Q01538 1121 aa8.83□□□□□ -1
PSD3-204ENST00000440756 CCER1Q8TC90 406 aaPredicted RBP8.82□□□□□ -1
PSD3-204ENST00000440756 VPS8Q8N3P4 1428 aa8.81□□□□□ -1
PSD3-204ENST00000440756 CFTRP13569 1480 aa8.8□□□□□ -1
PSD3-204ENST00000440756 CTTNBP2Q8WZ74 1663 aa8.79□□□□□ -1
PSD3-204ENST00000440756 CUL7Q14999 1698 aa8.78□□□□□ -1
PSD3-204ENST00000440756 CC2D2AQ9P2K1 1620 aa8.78□□□□□ -1
PSD3-204ENST00000440756 KIF21AQ7Z4S6 1674 aa8.78□□□□□ -1
PSD3-204ENST00000440756 DNMBPQ6XZF7 1577 aa8.74□□□□□ -1.01
PSD3-204ENST00000440756 CUX1P39880 1505 aa8.74□□□□□ -1.01
PSD3-204ENST00000440756 RAPGEF2Q9Y4G8 1499 aa8.73□□□□□ -1.01
PSD3-204ENST00000440756 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
PSD3-204ENST00000440756 LAMC3Q9Y6N6 1575 aa8.71□□□□□ -1.02
PSD3-204ENST00000440756 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
PSD3-204ENST00000440756 EFCAB5A4FU69 1503 aa8.69□□□□□ -1.02
PSD3-204ENST00000440756 FHAD1B1AJZ9 1412 aa8.68□□□□□ -1.02
PSD3-204ENST00000440756 RUSC2Q8N2Y8 1516 aa8.68□□□□□ -1.02
PSD3-204ENST00000440756 PRXQ9BXM0 1461 aa8.67□□□□□ -1.02
PSD3-204ENST00000440756 TTBK1Q5TCY1 1321 aaPredicted RBP8.67□□□□□ -1.02
PSD3-204ENST00000440756 WDR97A6NE52 1622 aa8.67□□□□□ -1.02
PSD3-204ENST00000440756 CUX2O14529 1486 aa8.67□□□□□ -1.02
PSD3-204ENST00000440756 CENPBP07199 599 aaPredicted RBP8.67□□□□□ -1.02
PSD3-204ENST00000440756 FGD5Q6ZNL6 1462 aa8.66□□□□□ -1.02
PSD3-204ENST00000440756 FANCD2Q9BXW9 1451 aa8.65□□□□□ -1.02
PSD3-204ENST00000440756 NEUROD1Q13562 356 aa8.65□□□□□ -1.03
PSD3-204ENST00000440756 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
PSD3-204ENST00000440756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.64□□□□□ -1.03
PSD3-204ENST00000440756 MAP3K1Q13233 1512 aa8.63□□□□□ -1.03
PSD3-204ENST00000440756 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
PSD3-204ENST00000440756 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
PSD3-204ENST00000440756 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
PSD3-204ENST00000440756 TIAM1Q13009 1591 aa8.62□□□□□ -1.03
PSD3-204ENST00000440756 ABCA10Q8WWZ4 1543 aa8.61□□□□□ -1.03
PSD3-204ENST00000440756 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
PSD3-204ENST00000440756 FYCO1Q9BQS8 1478 aa8.6□□□□□ -1.03
PSD3-204ENST00000440756 PDS5BQ9NTI5 1447 aa8.6□□□□□ -1.03
PSD3-204ENST00000440756 ARAP1Q96P48 1450 aa8.6□□□□□ -1.03
PSD3-204ENST00000440756 RANGAP1P46060 587 aaPredicted RBP8.6□□□□□ -1.03
PSD3-204ENST00000440756 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms