RNA–Protein interactions for RNA: ENST00000439608.1

ARF4P4-201, Transcript of ADP ribosylation factor 4 pseudogene 4, humanhuman

BASIC

Gene ARF4P4, Length 520 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P4-201ENST00000439608 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
ARF4P4-201ENST00000439608 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
ARF4P4-201ENST00000439608 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
ARF4P4-201ENST00000439608 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
ARF4P4-201ENST00000439608 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
ARF4P4-201ENST00000439608 FOXD1Q16676 465 aa18.65■□□□□ 0.58
ARF4P4-201ENST00000439608 ADRA2BP18089 450 aa18.19■□□□□ 0.5
ARF4P4-201ENST00000439608 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
ARF4P4-201ENST00000439608 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
ARF4P4-201ENST00000439608 MSH5O43196 834 aa17.01■□□□□ 0.31
ARF4P4-201ENST00000439608 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
ARF4P4-201ENST00000439608 KCNA4P22459 653 aa16.85■□□□□ 0.29
ARF4P4-201ENST00000439608 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
ARF4P4-201ENST00000439608 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
ARF4P4-201ENST00000439608 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
ARF4P4-201ENST00000439608 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
ARF4P4-201ENST00000439608 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
ARF4P4-201ENST00000439608 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
ARF4P4-201ENST00000439608 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
ARF4P4-201ENST00000439608 EHMT2Q96KQ7 1210 aa15.97■□□□□ 0.15
ARF4P4-201ENST00000439608 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
ARF4P4-201ENST00000439608 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
ARF4P4-201ENST00000439608 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
ARF4P4-201ENST00000439608 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
ARF4P4-201ENST00000439608 ZBTB22O15209 634 aa15.54■□□□□ 0.08
ARF4P4-201ENST00000439608 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
ARF4P4-201ENST00000439608 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
ARF4P4-201ENST00000439608 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
ARF4P4-201ENST00000439608 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
ARF4P4-201ENST00000439608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
ARF4P4-201ENST00000439608 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
ARF4P4-201ENST00000439608 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
ARF4P4-201ENST00000439608 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
ARF4P4-201ENST00000439608 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
ARF4P4-201ENST00000439608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
ARF4P4-201ENST00000439608 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
ARF4P4-201ENST00000439608 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
ARF4P4-201ENST00000439608 RNF39Q9H2S5 420 aa14.64□□□□□ -0.07
ARF4P4-201ENST00000439608 APLP2Q06481 763 aa14.46□□□□□ -0.09
ARF4P4-201ENST00000439608 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
ARF4P4-201ENST00000439608 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
ARF4P4-201ENST00000439608 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
ARF4P4-201ENST00000439608 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
ARF4P4-201ENST00000439608 CAPN15O75808 1086 aa14.35□□□□□ -0.11
ARF4P4-201ENST00000439608 POLA2Q14181 598 aa14.17□□□□□ -0.14
ARF4P4-201ENST00000439608 ABCB7O75027 752 aa14.15□□□□□ -0.14
ARF4P4-201ENST00000439608 FKBP8Q14318 412 aa14.11□□□□□ -0.15
ARF4P4-201ENST00000439608 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
ARF4P4-201ENST00000439608 MKRN4PQ13434 485 aaPredicted RBP14.05□□□□□ -0.16
ARF4P4-201ENST00000439608 DSG3P32926 999 aa14.04□□□□□ -0.16
ARF4P4-201ENST00000439608 FBLN2P98095 1184 aa13.96□□□□□ -0.17
ARF4P4-201ENST00000439608 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
ARF4P4-201ENST00000439608 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
ARF4P4-201ENST00000439608 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
ARF4P4-201ENST00000439608 PROM2Q8N271 834 aa13.6□□□□□ -0.23
ARF4P4-201ENST00000439608 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
ARF4P4-201ENST00000439608 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
ARF4P4-201ENST00000439608 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
ARF4P4-201ENST00000439608 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
ARF4P4-201ENST00000439608 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
ARF4P4-201ENST00000439608 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
ARF4P4-201ENST00000439608 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
ARF4P4-201ENST00000439608 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
ARF4P4-201ENST00000439608 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
ARF4P4-201ENST00000439608 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
ARF4P4-201ENST00000439608 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
ARF4P4-201ENST00000439608 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
ARF4P4-201ENST00000439608 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
ARF4P4-201ENST00000439608 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
ARF4P4-201ENST00000439608 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
ARF4P4-201ENST00000439608 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
ARF4P4-201ENST00000439608 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
ARF4P4-201ENST00000439608 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
ARF4P4-201ENST00000439608 MIER1Q8N108 512 aa13.08□□□□□ -0.32
ARF4P4-201ENST00000439608 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
ARF4P4-201ENST00000439608 PITPNM1O00562 1244 aa13□□□□□ -0.33
ARF4P4-201ENST00000439608 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
ARF4P4-201ENST00000439608 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
ARF4P4-201ENST00000439608 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
ARF4P4-201ENST00000439608 CREBZFQ9NS37 354 aa12.89□□□□□ -0.35
ARF4P4-201ENST00000439608 PKD2Q13563 968 aa12.84□□□□□ -0.35
ARF4P4-201ENST00000439608 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
ARF4P4-201ENST00000439608 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
ARF4P4-201ENST00000439608 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
ARF4P4-201ENST00000439608 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
ARF4P4-201ENST00000439608 NUBP1P53384 320 aa12.73□□□□□ -0.37
ARF4P4-201ENST00000439608 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
ARF4P4-201ENST00000439608 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
ARF4P4-201ENST00000439608 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
ARF4P4-201ENST00000439608 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
ARF4P4-201ENST00000439608 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
ARF4P4-201ENST00000439608 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
ARF4P4-201ENST00000439608 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
ARF4P4-201ENST00000439608 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
ARF4P4-201ENST00000439608 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
ARF4P4-201ENST00000439608 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
ARF4P4-201ENST00000439608 RGL2O15211 777 aa12.6□□□□□ -0.39
ARF4P4-201ENST00000439608 GSE1Q14687 1217 aa12.59□□□□□ -0.39
ARF4P4-201ENST00000439608 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
ARF4P4-201ENST00000439608 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms