RNA–Protein interactions for RNA: ENST00000439450.1

AL035258.1-201, humanhuman

TSL 3 BASIC

Gene AL035258.1, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL035258.1-201ENST00000439450 AEBP2Q6ZN18 517 aaPredicted RBP32.28■■■□□ 2.76
AL035258.1-201ENST00000439450 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
AL035258.1-201ENST00000439450 SENP3Q9H4L4 574 aaPredicted RBP27.71■■■□□ 2.03
AL035258.1-201ENST00000439450 PHF23Q9BUL5 403 aaPredicted RBP27.27■■□□□ 1.96
AL035258.1-201ENST00000439450 FOXD1Q16676 465 aa25.76■■□□□ 1.71
AL035258.1-201ENST00000439450 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
AL035258.1-201ENST00000439450 MSH5O43196 834 aa24.27■■□□□ 1.48
AL035258.1-201ENST00000439450 PIAS4Q8N2W9 510 aaPredicted RBP24.09■■□□□ 1.45
AL035258.1-201ENST00000439450 PPP6R1Q9UPN7 881 aa23.91■■□□□ 1.42
AL035258.1-201ENST00000439450 ADRA2BP18089 450 aa23.87■■□□□ 1.41
AL035258.1-201ENST00000439450 POTEDQ86YR6 584 aa23.87■■□□□ 1.41
AL035258.1-201ENST00000439450 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
AL035258.1-201ENST00000439450 MAPK8IP2Q13387 824 aaPredicted RBP21.94■■□□□ 1.1
AL035258.1-201ENST00000439450 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
AL035258.1-201ENST00000439450 PPP4R3CPQ6ZMV5 832 aa21.35■■□□□ 1.01
AL035258.1-201ENST00000439450 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
AL035258.1-201ENST00000439450 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
AL035258.1-201ENST00000439450 CNKSR2Q8WXI2 1034 aa21.02■□□□□ 0.96
AL035258.1-201ENST00000439450 CACNB1Q02641 598 aaPredicted RBP20.92■□□□□ 0.94
AL035258.1-201ENST00000439450 RNF216Q9NWF9 866 aaPredicted RBP20.86■□□□□ 0.93
AL035258.1-201ENST00000439450 RNF39Q9H2S5 420 aa20.63■□□□□ 0.89
AL035258.1-201ENST00000439450 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
AL035258.1-201ENST00000439450 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
AL035258.1-201ENST00000439450 C1QBPQ07021 282 aaKnown RBP20.38■□□□□ 0.85
AL035258.1-201ENST00000439450 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
AL035258.1-201ENST00000439450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.81
AL035258.1-201ENST00000439450 KCNA4P22459 653 aa19.62■□□□□ 0.73
AL035258.1-201ENST00000439450 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
AL035258.1-201ENST00000439450 CAPN15O75808 1086 aa19.4■□□□□ 0.7
AL035258.1-201ENST00000439450 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
AL035258.1-201ENST00000439450 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
AL035258.1-201ENST00000439450 DSG3P32926 999 aa19.26■□□□□ 0.67
AL035258.1-201ENST00000439450 APLP2Q06481 763 aa19.2■□□□□ 0.66
AL035258.1-201ENST00000439450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
AL035258.1-201ENST00000439450 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
AL035258.1-201ENST00000439450 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
AL035258.1-201ENST00000439450 ZNF219Q9P2Y4 722 aaPredicted RBP19.04■□□□□ 0.64
AL035258.1-201ENST00000439450 SAMD1Q6SPF0 538 aaPredicted RBP18.96■□□□□ 0.63
AL035258.1-201ENST00000439450 ABCB7O75027 752 aa18.88■□□□□ 0.61
AL035258.1-201ENST00000439450 MYCNP04198 464 aaPredicted RBP18.72■□□□□ 0.59
AL035258.1-201ENST00000439450 POTEHQ6S545 545 aa18.71■□□□□ 0.59
AL035258.1-201ENST00000439450 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
AL035258.1-201ENST00000439450 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
AL035258.1-201ENST00000439450 POLA2Q14181 598 aa18.47■□□□□ 0.55
AL035258.1-201ENST00000439450 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
AL035258.1-201ENST00000439450 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
AL035258.1-201ENST00000439450 ZBTB12Q9Y330 459 aaPredicted RBP18.18■□□□□ 0.5
AL035258.1-201ENST00000439450 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
AL035258.1-201ENST00000439450 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
AL035258.1-201ENST00000439450 ZBTB22O15209 634 aa17.97■□□□□ 0.47
AL035258.1-201ENST00000439450 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
AL035258.1-201ENST00000439450 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
AL035258.1-201ENST00000439450 REM2Q8IYK8 340 aaPredicted RBP17.78■□□□□ 0.44
AL035258.1-201ENST00000439450 FBLN2P98095 1184 aa17.65■□□□□ 0.42
AL035258.1-201ENST00000439450 PIP4P2Q8N4L2 257 aa17.59■□□□□ 0.41
AL035258.1-201ENST00000439450 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
AL035258.1-201ENST00000439450 SPDYE2BA6NHP3 402 aa17.55■□□□□ 0.4
AL035258.1-201ENST00000439450 SPDYE6P0CI01 402 aa17.55■□□□□ 0.4
AL035258.1-201ENST00000439450 SPDYE2Q495Y8 402 aa17.55■□□□□ 0.4
AL035258.1-201ENST00000439450 SP7Q8TDD2 431 aaPredicted RBP17.47■□□□□ 0.39
AL035258.1-201ENST00000439450 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
AL035258.1-201ENST00000439450 HAX1O00165 279 aa17.38■□□□□ 0.37
AL035258.1-201ENST00000439450 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
AL035258.1-201ENST00000439450 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
AL035258.1-201ENST00000439450 SPDYE1Q8NFV5 336 aaPredicted RBP17.3■□□□□ 0.36
AL035258.1-201ENST00000439450 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
AL035258.1-201ENST00000439450 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
AL035258.1-201ENST00000439450 PRKAR2AP13861 404 aaKnown RBP17.15■□□□□ 0.34
AL035258.1-201ENST00000439450 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
AL035258.1-201ENST00000439450 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
AL035258.1-201ENST00000439450 EVX2Q03828 476 aa17.01■□□□□ 0.31
AL035258.1-201ENST00000439450 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
AL035258.1-201ENST00000439450 C19orf67A6NJJ6 358 aa16.9■□□□□ 0.3
AL035258.1-201ENST00000439450 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
AL035258.1-201ENST00000439450 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
AL035258.1-201ENST00000439450 GABBR2O75899 941 aa16.7■□□□□ 0.26
AL035258.1-201ENST00000439450 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
AL035258.1-201ENST00000439450 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
AL035258.1-201ENST00000439450 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
AL035258.1-201ENST00000439450 SPDYE4A6NLX3 237 aa16.54■□□□□ 0.24
AL035258.1-201ENST00000439450 CLCN6P51797 869 aa16.51■□□□□ 0.23
AL035258.1-201ENST00000439450 CREBZFQ9NS37 354 aa16.43■□□□□ 0.22
AL035258.1-201ENST00000439450 LHX8Q68G74 356 aa16.39■□□□□ 0.21
AL035258.1-201ENST00000439450 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
AL035258.1-201ENST00000439450 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
AL035258.1-201ENST00000439450 DCBLD2Q96PD2 775 aa16.31■□□□□ 0.2
AL035258.1-201ENST00000439450 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
AL035258.1-201ENST00000439450 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
AL035258.1-201ENST00000439450 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
AL035258.1-201ENST00000439450 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
AL035258.1-201ENST00000439450 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
AL035258.1-201ENST00000439450 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
AL035258.1-201ENST00000439450 PROM2Q8N271 834 aa16.04■□□□□ 0.16
AL035258.1-201ENST00000439450 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
AL035258.1-201ENST00000439450 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
AL035258.1-201ENST00000439450 MS4A3Q96HJ5 214 aa15.85■□□□□ 0.13
AL035258.1-201ENST00000439450 MIER1Q8N108 512 aa15.83■□□□□ 0.12
AL035258.1-201ENST00000439450 ASTLQ6HA08 431 aaPredicted RBP15.79■□□□□ 0.12
AL035258.1-201ENST00000439450 PELP1Q8IZL8 1130 aaKnown RBP15.77■□□□□ 0.12
AL035258.1-201ENST00000439450 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms