RNA–Protein interactions for RNA: ENST00000438971.1

USP9YP22-201, Transcript of USP9Y pseudogene 22, humanhuman

BASIC

Gene USP9YP22, Length 294 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP22-201ENST00000438971 AEBP2Q6ZN18 517 aaPredicted RBP26.87■■□□□ 1.89
USP9YP22-201ENST00000438971 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
USP9YP22-201ENST00000438971 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
USP9YP22-201ENST00000438971 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
USP9YP22-201ENST00000438971 FOXD1Q16676 465 aa21.44■■□□□ 1.02
USP9YP22-201ENST00000438971 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
USP9YP22-201ENST00000438971 MSH5O43196 834 aa20.24■□□□□ 0.83
USP9YP22-201ENST00000438971 PIAS4Q8N2W9 510 aaPredicted RBP20.01■□□□□ 0.79
USP9YP22-201ENST00000438971 PPP6R1Q9UPN7 881 aa19.89■□□□□ 0.77
USP9YP22-201ENST00000438971 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
USP9YP22-201ENST00000438971 ADRA2BP18089 450 aa19.83■□□□□ 0.77
USP9YP22-201ENST00000438971 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
USP9YP22-201ENST00000438971 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
USP9YP22-201ENST00000438971 MAPK8IP2Q13387 824 aaPredicted RBP18.23■□□□□ 0.51
USP9YP22-201ENST00000438971 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
USP9YP22-201ENST00000438971 HOXD11P31277 338 aaPredicted RBP17.55■□□□□ 0.4
USP9YP22-201ENST00000438971 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
USP9YP22-201ENST00000438971 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
USP9YP22-201ENST00000438971 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
USP9YP22-201ENST00000438971 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
USP9YP22-201ENST00000438971 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
USP9YP22-201ENST00000438971 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
USP9YP22-201ENST00000438971 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
USP9YP22-201ENST00000438971 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
USP9YP22-201ENST00000438971 NPM3O75607 178 aaKnown RBP16.76■□□□□ 0.27
USP9YP22-201ENST00000438971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
USP9YP22-201ENST00000438971 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
USP9YP22-201ENST00000438971 KCNA4P22459 653 aa16.27■□□□□ 0.2
USP9YP22-201ENST00000438971 CAPN15O75808 1086 aa16.09■□□□□ 0.17
USP9YP22-201ENST00000438971 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
USP9YP22-201ENST00000438971 DSG3P32926 999 aa16.04■□□□□ 0.16
USP9YP22-201ENST00000438971 SLC4A2P04920 1241 aa16.02■□□□□ 0.16
USP9YP22-201ENST00000438971 APLP2Q06481 763 aa16■□□□□ 0.15
USP9YP22-201ENST00000438971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
USP9YP22-201ENST00000438971 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
USP9YP22-201ENST00000438971 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
USP9YP22-201ENST00000438971 SAMD1Q6SPF0 538 aaPredicted RBP15.78■□□□□ 0.12
USP9YP22-201ENST00000438971 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
USP9YP22-201ENST00000438971 ABCB7O75027 752 aa15.64■□□□□ 0.09
USP9YP22-201ENST00000438971 POTEHQ6S545 545 aa15.58■□□□□ 0.08
USP9YP22-201ENST00000438971 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
USP9YP22-201ENST00000438971 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
USP9YP22-201ENST00000438971 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
USP9YP22-201ENST00000438971 POLA2Q14181 598 aa15.35■□□□□ 0.05
USP9YP22-201ENST00000438971 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
USP9YP22-201ENST00000438971 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
USP9YP22-201ENST00000438971 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
USP9YP22-201ENST00000438971 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
USP9YP22-201ENST00000438971 AKT1S1Q96B36 256 aa15□□□□□ -0.01
USP9YP22-201ENST00000438971 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
USP9YP22-201ENST00000438971 ZBTB22O15209 634 aa14.91□□□□□ -0.02
USP9YP22-201ENST00000438971 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
USP9YP22-201ENST00000438971 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
USP9YP22-201ENST00000438971 FBLN2P98095 1184 aa14.66□□□□□ -0.06
USP9YP22-201ENST00000438971 PIP4P2Q8N4L2 257 aa14.63□□□□□ -0.07
USP9YP22-201ENST00000438971 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
USP9YP22-201ENST00000438971 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
USP9YP22-201ENST00000438971 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
USP9YP22-201ENST00000438971 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
USP9YP22-201ENST00000438971 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
USP9YP22-201ENST00000438971 SP7Q8TDD2 431 aaPredicted RBP14.55□□□□□ -0.08
USP9YP22-201ENST00000438971 HAX1O00165 279 aa14.42□□□□□ -0.1
USP9YP22-201ENST00000438971 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
USP9YP22-201ENST00000438971 SPDYE1Q8NFV5 336 aaPredicted RBP14.39□□□□□ -0.11
USP9YP22-201ENST00000438971 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
USP9YP22-201ENST00000438971 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
USP9YP22-201ENST00000438971 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
USP9YP22-201ENST00000438971 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
USP9YP22-201ENST00000438971 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.14
USP9YP22-201ENST00000438971 EVX2Q03828 476 aa14.14□□□□□ -0.15
USP9YP22-201ENST00000438971 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP9YP22-201ENST00000438971 C19orf67A6NJJ6 358 aa14.1□□□□□ -0.15
USP9YP22-201ENST00000438971 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
USP9YP22-201ENST00000438971 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
USP9YP22-201ENST00000438971 GABBR2O75899 941 aa13.9□□□□□ -0.18
USP9YP22-201ENST00000438971 FARP1Q9Y4F1 1045 aaPredicted RBP13.85□□□□□ -0.19
USP9YP22-201ENST00000438971 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
USP9YP22-201ENST00000438971 CLCN6P51797 869 aa13.82□□□□□ -0.2
USP9YP22-201ENST00000438971 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
USP9YP22-201ENST00000438971 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
USP9YP22-201ENST00000438971 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
USP9YP22-201ENST00000438971 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
USP9YP22-201ENST00000438971 LHX8Q68G74 356 aa13.65□□□□□ -0.22
USP9YP22-201ENST00000438971 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
USP9YP22-201ENST00000438971 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
USP9YP22-201ENST00000438971 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
USP9YP22-201ENST00000438971 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
USP9YP22-201ENST00000438971 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
USP9YP22-201ENST00000438971 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
USP9YP22-201ENST00000438971 MNX1P50219 401 aaPredicted RBP13.41□□□□□ -0.26
USP9YP22-201ENST00000438971 PROM2Q8N271 834 aa13.4□□□□□ -0.26
USP9YP22-201ENST00000438971 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
USP9YP22-201ENST00000438971 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
USP9YP22-201ENST00000438971 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
USP9YP22-201ENST00000438971 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
USP9YP22-201ENST00000438971 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
USP9YP22-201ENST00000438971 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
USP9YP22-201ENST00000438971 MIER1Q8N108 512 aa13.13□□□□□ -0.31
USP9YP22-201ENST00000438971 CCDC61Q9Y6R9 512 aa13.12□□□□□ -0.31
USP9YP22-201ENST00000438971 C7P10643 843 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms