RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
LSM1P1-201ENST00000438629 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
LSM1P1-201ENST00000438629 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
LSM1P1-201ENST00000438629 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
LSM1P1-201ENST00000438629 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
LSM1P1-201ENST00000438629 FOXD1Q16676 465 aa14.38□□□□□ -0.11
LSM1P1-201ENST00000438629 ADRA2BP18089 450 aa13.97□□□□□ -0.17
LSM1P1-201ENST00000438629 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
LSM1P1-201ENST00000438629 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
LSM1P1-201ENST00000438629 MSH5O43196 834 aa13.28□□□□□ -0.28
LSM1P1-201ENST00000438629 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
LSM1P1-201ENST00000438629 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.33
LSM1P1-201ENST00000438629 KCNA4P22459 653 aa12.95□□□□□ -0.34
LSM1P1-201ENST00000438629 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
LSM1P1-201ENST00000438629 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
LSM1P1-201ENST00000438629 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
LSM1P1-201ENST00000438629 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
LSM1P1-201ENST00000438629 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
LSM1P1-201ENST00000438629 SLC4A1APQ9BWU0 796 aaKnown RBP12.43□□□□□ -0.42
LSM1P1-201ENST00000438629 RNF216Q9NWF9 866 aaPredicted RBP12.41□□□□□ -0.42
LSM1P1-201ENST00000438629 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
LSM1P1-201ENST00000438629 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
LSM1P1-201ENST00000438629 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
LSM1P1-201ENST00000438629 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
LSM1P1-201ENST00000438629 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
LSM1P1-201ENST00000438629 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
LSM1P1-201ENST00000438629 ZBTB22O15209 634 aa11.86□□□□□ -0.51
LSM1P1-201ENST00000438629 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
LSM1P1-201ENST00000438629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
LSM1P1-201ENST00000438629 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
LSM1P1-201ENST00000438629 POTEDQ86YR6 584 aa11.65□□□□□ -0.54
LSM1P1-201ENST00000438629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.57□□□□□ -0.56
LSM1P1-201ENST00000438629 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
LSM1P1-201ENST00000438629 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
LSM1P1-201ENST00000438629 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
LSM1P1-201ENST00000438629 U3KPZ7 1027 aaPredicted RBP11.49□□□□□ -0.57
LSM1P1-201ENST00000438629 APLP2Q06481 763 aa11.43□□□□□ -0.58
LSM1P1-201ENST00000438629 RNF39Q9H2S5 420 aa11.34□□□□□ -0.59
LSM1P1-201ENST00000438629 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
LSM1P1-201ENST00000438629 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
LSM1P1-201ENST00000438629 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
LSM1P1-201ENST00000438629 CAPN15O75808 1086 aa11.11□□□□□ -0.63
LSM1P1-201ENST00000438629 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
LSM1P1-201ENST00000438629 SPINK5Q9NQ38 1064 aaPredicted RBP11.09□□□□□ -0.63
LSM1P1-201ENST00000438629 POLA2Q14181 598 aa10.96□□□□□ -0.65
LSM1P1-201ENST00000438629 CACNB1Q02641 598 aaPredicted RBP10.93□□□□□ -0.66
LSM1P1-201ENST00000438629 FBLN2P98095 1184 aa10.91□□□□□ -0.66
LSM1P1-201ENST00000438629 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
LSM1P1-201ENST00000438629 FKBP8Q14318 412 aa10.88□□□□□ -0.67
LSM1P1-201ENST00000438629 ABCB7O75027 752 aa10.85□□□□□ -0.67
LSM1P1-201ENST00000438629 DSG3P32926 999 aa10.85□□□□□ -0.67
LSM1P1-201ENST00000438629 MKRN4PQ13434 485 aaPredicted RBP10.78□□□□□ -0.68
LSM1P1-201ENST00000438629 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
LSM1P1-201ENST00000438629 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
LSM1P1-201ENST00000438629 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
LSM1P1-201ENST00000438629 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
LSM1P1-201ENST00000438629 ZNF692Q9BU19 519 aaPredicted RBP10.55□□□□□ -0.72
LSM1P1-201ENST00000438629 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
LSM1P1-201ENST00000438629 PROM2Q8N271 834 aa10.54□□□□□ -0.72
LSM1P1-201ENST00000438629 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
LSM1P1-201ENST00000438629 SSUH2Q9Y2M2 353 aa10.46□□□□□ -0.73
LSM1P1-201ENST00000438629 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
LSM1P1-201ENST00000438629 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
LSM1P1-201ENST00000438629 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
LSM1P1-201ENST00000438629 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
LSM1P1-201ENST00000438629 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
LSM1P1-201ENST00000438629 VASPP50552 380 aaPredicted RBP10.3□□□□□ -0.76
LSM1P1-201ENST00000438629 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
LSM1P1-201ENST00000438629 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
LSM1P1-201ENST00000438629 RTN4Q9NQC3 1192 aaKnown RBP10.19□□□□□ -0.78
LSM1P1-201ENST00000438629 REM2Q8IYK8 340 aaPredicted RBP10.17□□□□□ -0.78
LSM1P1-201ENST00000438629 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
LSM1P1-201ENST00000438629 MIER1Q8N108 512 aa10.16□□□□□ -0.78
LSM1P1-201ENST00000438629 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.78
LSM1P1-201ENST00000438629 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
LSM1P1-201ENST00000438629 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
LSM1P1-201ENST00000438629 CLEC11AQ9Y240 323 aa10.12□□□□□ -0.79
LSM1P1-201ENST00000438629 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
LSM1P1-201ENST00000438629 SPOCK2Q92563 424 aa10.07□□□□□ -0.8
LSM1P1-201ENST00000438629 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
LSM1P1-201ENST00000438629 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
LSM1P1-201ENST00000438629 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
LSM1P1-201ENST00000438629 PKD2Q13563 968 aa9.88□□□□□ -0.83
LSM1P1-201ENST00000438629 GSE1Q14687 1217 aa9.86□□□□□ -0.83
LSM1P1-201ENST00000438629 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
LSM1P1-201ENST00000438629 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
LSM1P1-201ENST00000438629 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
LSM1P1-201ENST00000438629 CHRDL2Q6WN34 429 aa9.84□□□□□ -0.83
LSM1P1-201ENST00000438629 ECM2O94769 699 aaPredicted RBP9.83□□□□□ -0.84
LSM1P1-201ENST00000438629 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
LSM1P1-201ENST00000438629 NUBP1P53384 320 aa9.83□□□□□ -0.84
LSM1P1-201ENST00000438629 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
LSM1P1-201ENST00000438629 PRKAR2AP13861 404 aaKnown RBP9.8□□□□□ -0.84
LSM1P1-201ENST00000438629 FAM212AQ96EL1 285 aa9.8□□□□□ -0.84
LSM1P1-201ENST00000438629 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
LSM1P1-201ENST00000438629 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
LSM1P1-201ENST00000438629 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
LSM1P1-201ENST00000438629 PIP4P2Q8N4L2 257 aa9.74□□□□□ -0.85
LSM1P1-201ENST00000438629 RASEFQ8IZ41 740 aa9.72□□□□□ -0.85
LSM1P1-201ENST00000438629 CHRM1P11229 460 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms