RNA–Protein interactions for RNA: ENST00000438459.1

TRIM60P9Y-201, Transcript of tripartite motif containing 60 pseudogene 9, Y-linked, humanhuman

BASIC

Gene TRIM60P9Y, Length 816 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60P9Y-201ENST00000438459 AEBP2Q6ZN18 517 aaPredicted RBP28.9■■■□□ 2.22
TRIM60P9Y-201ENST00000438459 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
TRIM60P9Y-201ENST00000438459 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
TRIM60P9Y-201ENST00000438459 PHF23Q9BUL5 403 aaPredicted RBP24.29■■□□□ 1.48
TRIM60P9Y-201ENST00000438459 FOXD1Q16676 465 aa22.93■■□□□ 1.26
TRIM60P9Y-201ENST00000438459 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
TRIM60P9Y-201ENST00000438459 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
TRIM60P9Y-201ENST00000438459 ADRA2BP18089 450 aa21.47■■□□□ 1.03
TRIM60P9Y-201ENST00000438459 PIAS4Q8N2W9 510 aaPredicted RBP21.43■■□□□ 1.02
TRIM60P9Y-201ENST00000438459 MSH5O43196 834 aa21.36■■□□□ 1.01
TRIM60P9Y-201ENST00000438459 POTEDQ86YR6 584 aa20.8■□□□□ 0.92
TRIM60P9Y-201ENST00000438459 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
TRIM60P9Y-201ENST00000438459 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
TRIM60P9Y-201ENST00000438459 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
TRIM60P9Y-201ENST00000438459 PPP4R3CPQ6ZMV5 832 aa19.27■□□□□ 0.68
TRIM60P9Y-201ENST00000438459 CNKSR2Q8WXI2 1034 aa18.86■□□□□ 0.61
TRIM60P9Y-201ENST00000438459 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
TRIM60P9Y-201ENST00000438459 DCAF8L1A6NGE4 600 aa18.74■□□□□ 0.59
TRIM60P9Y-201ENST00000438459 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
TRIM60P9Y-201ENST00000438459 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
TRIM60P9Y-201ENST00000438459 CACNB1Q02641 598 aaPredicted RBP18.35■□□□□ 0.53
TRIM60P9Y-201ENST00000438459 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
TRIM60P9Y-201ENST00000438459 RNF39Q9H2S5 420 aa18.27■□□□□ 0.52
TRIM60P9Y-201ENST00000438459 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
TRIM60P9Y-201ENST00000438459 KCNA4P22459 653 aa18.03■□□□□ 0.48
TRIM60P9Y-201ENST00000438459 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
TRIM60P9Y-201ENST00000438459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRIM60P9Y-201ENST00000438459 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
TRIM60P9Y-201ENST00000438459 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
TRIM60P9Y-201ENST00000438459 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
TRIM60P9Y-201ENST00000438459 CAPN15O75808 1086 aa17.27■□□□□ 0.36
TRIM60P9Y-201ENST00000438459 DSG3P32926 999 aa17.14■□□□□ 0.33
TRIM60P9Y-201ENST00000438459 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
TRIM60P9Y-201ENST00000438459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
TRIM60P9Y-201ENST00000438459 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
TRIM60P9Y-201ENST00000438459 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
TRIM60P9Y-201ENST00000438459 APLP2Q06481 763 aa16.98■□□□□ 0.31
TRIM60P9Y-201ENST00000438459 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
TRIM60P9Y-201ENST00000438459 ABCB7O75027 752 aa16.92■□□□□ 0.3
TRIM60P9Y-201ENST00000438459 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
TRIM60P9Y-201ENST00000438459 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
TRIM60P9Y-201ENST00000438459 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
TRIM60P9Y-201ENST00000438459 ZBTB22O15209 634 aa16.6■□□□□ 0.25
TRIM60P9Y-201ENST00000438459 POLA2Q14181 598 aa16.58■□□□□ 0.24
TRIM60P9Y-201ENST00000438459 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
TRIM60P9Y-201ENST00000438459 POTEHQ6S545 545 aa16.3■□□□□ 0.2
TRIM60P9Y-201ENST00000438459 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
TRIM60P9Y-201ENST00000438459 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
TRIM60P9Y-201ENST00000438459 ZBTB12Q9Y330 459 aaPredicted RBP16.15■□□□□ 0.18
TRIM60P9Y-201ENST00000438459 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
TRIM60P9Y-201ENST00000438459 CHRDL2Q6WN34 429 aa15.96■□□□□ 0.15
TRIM60P9Y-201ENST00000438459 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
TRIM60P9Y-201ENST00000438459 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
TRIM60P9Y-201ENST00000438459 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
TRIM60P9Y-201ENST00000438459 FBLN2P98095 1184 aa15.82■□□□□ 0.12
TRIM60P9Y-201ENST00000438459 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
TRIM60P9Y-201ENST00000438459 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
TRIM60P9Y-201ENST00000438459 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
TRIM60P9Y-201ENST00000438459 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
TRIM60P9Y-201ENST00000438459 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
TRIM60P9Y-201ENST00000438459 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
TRIM60P9Y-201ENST00000438459 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
TRIM60P9Y-201ENST00000438459 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
TRIM60P9Y-201ENST00000438459 SSUH2Q9Y2M2 353 aa15.52■□□□□ 0.08
TRIM60P9Y-201ENST00000438459 FXR2P51116 673 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRIM60P9Y-201ENST00000438459 CLEC11AQ9Y240 323 aa15.43■□□□□ 0.06
TRIM60P9Y-201ENST00000438459 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
TRIM60P9Y-201ENST00000438459 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM60P9Y-201ENST00000438459 HAX1O00165 279 aa15.32■□□□□ 0.04
TRIM60P9Y-201ENST00000438459 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
TRIM60P9Y-201ENST00000438459 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
TRIM60P9Y-201ENST00000438459 EVX2Q03828 476 aa15.19■□□□□ 0.02
TRIM60P9Y-201ENST00000438459 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
TRIM60P9Y-201ENST00000438459 PRR29P0C7W0 189 aa15.16■□□□□ 0.02
TRIM60P9Y-201ENST00000438459 SPDYE4A6NLX3 237 aa15.05■□□□□ -0
TRIM60P9Y-201ENST00000438459 C19orf67A6NJJ6 358 aa15.02■□□□□ -0
TRIM60P9Y-201ENST00000438459 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
TRIM60P9Y-201ENST00000438459 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
TRIM60P9Y-201ENST00000438459 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
TRIM60P9Y-201ENST00000438459 GABBR2O75899 941 aa14.8□□□□□ -0.04
TRIM60P9Y-201ENST00000438459 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
TRIM60P9Y-201ENST00000438459 PROM2Q8N271 834 aa14.67□□□□□ -0.06
TRIM60P9Y-201ENST00000438459 ZRANB1Q9UGI0 708 aa14.6□□□□□ -0.07
TRIM60P9Y-201ENST00000438459 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
TRIM60P9Y-201ENST00000438459 ZNF579Q8NAF0 562 aaKnown RBP14.54□□□□□ -0.08
TRIM60P9Y-201ENST00000438459 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
TRIM60P9Y-201ENST00000438459 NPM1P06748 294 aaKnown RBP eCLIP14.51□□□□□ -0.09
TRIM60P9Y-201ENST00000438459 CLCN6P51797 869 aa14.47□□□□□ -0.09
TRIM60P9Y-201ENST00000438459 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
TRIM60P9Y-201ENST00000438459 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
TRIM60P9Y-201ENST00000438459 GALR2O43603 387 aaPredicted RBP14.4□□□□□ -0.1
TRIM60P9Y-201ENST00000438459 FKBP8Q14318 412 aa14.39□□□□□ -0.11
TRIM60P9Y-201ENST00000438459 DCBLD2Q96PD2 775 aa14.39□□□□□ -0.11
TRIM60P9Y-201ENST00000438459 LHX8Q68G74 356 aa14.37□□□□□ -0.11
TRIM60P9Y-201ENST00000438459 MIER1Q8N108 512 aa14.35□□□□□ -0.11
TRIM60P9Y-201ENST00000438459 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
TRIM60P9Y-201ENST00000438459 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
TRIM60P9Y-201ENST00000438459 PLCD3Q8N3E9 789 aa14.25□□□□□ -0.13
TRIM60P9Y-201ENST00000438459 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
TRIM60P9Y-201ENST00000438459 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms