RNA–Protein interactions for RNA: ENST00000438327.2

LINC00446-202, long intergenic non-protein coding RNA 446, humanhuman

TSL 3 BASIC

Gene LINC00446, Length 357 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00446-202ENST00000438327 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
LINC00446-202ENST00000438327 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
LINC00446-202ENST00000438327 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
LINC00446-202ENST00000438327 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
LINC00446-202ENST00000438327 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.21
LINC00446-202ENST00000438327 FOXD1Q16676 465 aa22.01■■□□□ 1.11
LINC00446-202ENST00000438327 ADRA2BP18089 450 aa21.41■■□□□ 1.02
LINC00446-202ENST00000438327 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
LINC00446-202ENST00000438327 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
LINC00446-202ENST00000438327 POTEDQ86YR6 584 aa20.73■□□□□ 0.91
LINC00446-202ENST00000438327 MSH5O43196 834 aa20.2■□□□□ 0.82
LINC00446-202ENST00000438327 PPP4R3CPQ6ZMV5 832 aa19.94■□□□□ 0.78
LINC00446-202ENST00000438327 KCNA4P22459 653 aa19.79■□□□□ 0.76
LINC00446-202ENST00000438327 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
LINC00446-202ENST00000438327 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
LINC00446-202ENST00000438327 MAPK8IP2Q13387 824 aaPredicted RBP19.35■□□□□ 0.69
LINC00446-202ENST00000438327 CNKSR2Q8WXI2 1034 aa19.32■□□□□ 0.68
LINC00446-202ENST00000438327 NPM3O75607 178 aaKnown RBP19.21■□□□□ 0.67
LINC00446-202ENST00000438327 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
LINC00446-202ENST00000438327 SLC4A1APQ9BWU0 796 aaKnown RBP18.9■□□□□ 0.62
LINC00446-202ENST00000438327 RNF216Q9NWF9 866 aaPredicted RBP18.86■□□□□ 0.61
LINC00446-202ENST00000438327 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
LINC00446-202ENST00000438327 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
LINC00446-202ENST00000438327 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
LINC00446-202ENST00000438327 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
LINC00446-202ENST00000438327 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
LINC00446-202ENST00000438327 ZBTB22O15209 634 aa18.2■□□□□ 0.5
LINC00446-202ENST00000438327 FOXD4L1Q9NU39 408 aa18.13■□□□□ 0.49
LINC00446-202ENST00000438327 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
LINC00446-202ENST00000438327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
LINC00446-202ENST00000438327 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
LINC00446-202ENST00000438327 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
LINC00446-202ENST00000438327 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
LINC00446-202ENST00000438327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
LINC00446-202ENST00000438327 ATXN8OSP0DMR3 200 aa17.46■□□□□ 0.39
LINC00446-202ENST00000438327 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
LINC00446-202ENST00000438327 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
LINC00446-202ENST00000438327 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
LINC00446-202ENST00000438327 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
LINC00446-202ENST00000438327 APLP2Q06481 763 aa17.22■□□□□ 0.35
LINC00446-202ENST00000438327 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
LINC00446-202ENST00000438327 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
LINC00446-202ENST00000438327 CAPN15O75808 1086 aa16.96■□□□□ 0.31
LINC00446-202ENST00000438327 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
LINC00446-202ENST00000438327 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
LINC00446-202ENST00000438327 POLA2Q14181 598 aa16.73■□□□□ 0.27
LINC00446-202ENST00000438327 ABCB7O75027 752 aa16.66■□□□□ 0.26
LINC00446-202ENST00000438327 DSG3P32926 999 aa16.58■□□□□ 0.24
LINC00446-202ENST00000438327 FKBP8Q14318 412 aa16.57■□□□□ 0.24
LINC00446-202ENST00000438327 FBLN2P98095 1184 aa16.52■□□□□ 0.24
LINC00446-202ENST00000438327 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
LINC00446-202ENST00000438327 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
LINC00446-202ENST00000438327 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
LINC00446-202ENST00000438327 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
LINC00446-202ENST00000438327 POTEHQ6S545 545 aa16.1■□□□□ 0.17
LINC00446-202ENST00000438327 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
LINC00446-202ENST00000438327 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
LINC00446-202ENST00000438327 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
LINC00446-202ENST00000438327 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
LINC00446-202ENST00000438327 PROM2Q8N271 834 aa16.02■□□□□ 0.16
LINC00446-202ENST00000438327 SSUH2Q9Y2M2 353 aa15.92■□□□□ 0.14
LINC00446-202ENST00000438327 FBXO3Q9UK99 471 aa15.9■□□□□ 0.14
LINC00446-202ENST00000438327 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
LINC00446-202ENST00000438327 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
LINC00446-202ENST00000438327 VASPP50552 380 aaPredicted RBP15.67■□□□□ 0.1
LINC00446-202ENST00000438327 AKT1S1Q96B36 256 aa15.67■□□□□ 0.1
LINC00446-202ENST00000438327 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
LINC00446-202ENST00000438327 AMER1Q5JTC6 1135 aaPredicted RBP15.56■□□□□ 0.08
LINC00446-202ENST00000438327 REM2Q8IYK8 340 aaPredicted RBP15.52■□□□□ 0.08
LINC00446-202ENST00000438327 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
LINC00446-202ENST00000438327 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
LINC00446-202ENST00000438327 IFNLR1Q8IU57 520 aaPredicted RBP15.48■□□□□ 0.07
LINC00446-202ENST00000438327 PLCD3Q8N3E9 789 aa15.45■□□□□ 0.06
LINC00446-202ENST00000438327 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
LINC00446-202ENST00000438327 MIER1Q8N108 512 aa15.44■□□□□ 0.06
LINC00446-202ENST00000438327 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
LINC00446-202ENST00000438327 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
LINC00446-202ENST00000438327 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
LINC00446-202ENST00000438327 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
LINC00446-202ENST00000438327 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
LINC00446-202ENST00000438327 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
LINC00446-202ENST00000438327 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
LINC00446-202ENST00000438327 MNX1P50219 401 aaPredicted RBP15.05■□□□□ -0
LINC00446-202ENST00000438327 PKD2Q13563 968 aa15.05■□□□□ -0
LINC00446-202ENST00000438327 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
LINC00446-202ENST00000438327 CHADLQ6NUI6 762 aa15.03■□□□□ -0
LINC00446-202ENST00000438327 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
LINC00446-202ENST00000438327 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.01
LINC00446-202ENST00000438327 NUBP1P53384 320 aa14.98□□□□□ -0.01
LINC00446-202ENST00000438327 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
LINC00446-202ENST00000438327 PRKAR2AP13861 404 aaKnown RBP14.96□□□□□ -0.01
LINC00446-202ENST00000438327 ECM2O94769 699 aaPredicted RBP14.95□□□□□ -0.02
LINC00446-202ENST00000438327 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
LINC00446-202ENST00000438327 FARP1Q9Y4F1 1045 aaPredicted RBP14.91□□□□□ -0.02
LINC00446-202ENST00000438327 GSE1Q14687 1217 aa14.9□□□□□ -0.02
LINC00446-202ENST00000438327 DCAF8Q5TAQ9 597 aa14.9□□□□□ -0.02
LINC00446-202ENST00000438327 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
LINC00446-202ENST00000438327 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
LINC00446-202ENST00000438327 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
LINC00446-202ENST00000438327 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms