RNA–Protein interactions for RNA: ENST00000438081.1

SKP1P1-201, Transcript of S-phase kinase associated protein 1 pseudogene 1, humanhuman

BASIC

Gene SKP1P1, Length 489 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P1-201ENST00000438081 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
SKP1P1-201ENST00000438081 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
SKP1P1-201ENST00000438081 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
SKP1P1-201ENST00000438081 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
SKP1P1-201ENST00000438081 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
SKP1P1-201ENST00000438081 FOXD1Q16676 465 aa15.25■□□□□ 0.03
SKP1P1-201ENST00000438081 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
SKP1P1-201ENST00000438081 ADRA2BP18089 450 aa14.74□□□□□ -0.05
SKP1P1-201ENST00000438081 PIAS4Q8N2W9 510 aaPredicted RBP14.31□□□□□ -0.12
SKP1P1-201ENST00000438081 MSH5O43196 834 aa13.92□□□□□ -0.18
SKP1P1-201ENST00000438081 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
SKP1P1-201ENST00000438081 KCNA4P22459 653 aa13.54□□□□□ -0.24
SKP1P1-201ENST00000438081 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
SKP1P1-201ENST00000438081 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
SKP1P1-201ENST00000438081 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
SKP1P1-201ENST00000438081 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
SKP1P1-201ENST00000438081 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
SKP1P1-201ENST00000438081 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
SKP1P1-201ENST00000438081 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
SKP1P1-201ENST00000438081 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
SKP1P1-201ENST00000438081 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
SKP1P1-201ENST00000438081 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
SKP1P1-201ENST00000438081 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
SKP1P1-201ENST00000438081 ZBTB22O15209 634 aa12.54□□□□□ -0.4
SKP1P1-201ENST00000438081 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
SKP1P1-201ENST00000438081 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
SKP1P1-201ENST00000438081 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
SKP1P1-201ENST00000438081 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
SKP1P1-201ENST00000438081 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
SKP1P1-201ENST00000438081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.46
SKP1P1-201ENST00000438081 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
SKP1P1-201ENST00000438081 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
SKP1P1-201ENST00000438081 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
SKP1P1-201ENST00000438081 ATXN8OSP0DMR3 200 aa11.97□□□□□ -0.49
SKP1P1-201ENST00000438081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
SKP1P1-201ENST00000438081 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
SKP1P1-201ENST00000438081 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
SKP1P1-201ENST00000438081 ATF5Q9Y2D1 282 aaPredicted RBP11.89□□□□□ -0.51
SKP1P1-201ENST00000438081 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
SKP1P1-201ENST00000438081 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
SKP1P1-201ENST00000438081 APLP2Q06481 763 aa11.69□□□□□ -0.54
SKP1P1-201ENST00000438081 ZNF219Q9P2Y4 722 aaPredicted RBP11.62□□□□□ -0.55
SKP1P1-201ENST00000438081 CAPN15O75808 1086 aa11.56□□□□□ -0.56
SKP1P1-201ENST00000438081 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
SKP1P1-201ENST00000438081 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
SKP1P1-201ENST00000438081 DSG3P32926 999 aa11.47□□□□□ -0.57
SKP1P1-201ENST00000438081 POLA2Q14181 598 aa11.45□□□□□ -0.58
SKP1P1-201ENST00000438081 ABCB7O75027 752 aa11.4□□□□□ -0.58
SKP1P1-201ENST00000438081 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
SKP1P1-201ENST00000438081 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
SKP1P1-201ENST00000438081 FBLN2P98095 1184 aa11.2□□□□□ -0.62
SKP1P1-201ENST00000438081 FKBP8Q14318 412 aa11.2□□□□□ -0.62
SKP1P1-201ENST00000438081 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
SKP1P1-201ENST00000438081 PROM2Q8N271 834 aa11.08□□□□□ -0.64
SKP1P1-201ENST00000438081 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
SKP1P1-201ENST00000438081 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
SKP1P1-201ENST00000438081 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
SKP1P1-201ENST00000438081 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
SKP1P1-201ENST00000438081 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
SKP1P1-201ENST00000438081 ZNF692Q9BU19 519 aaPredicted RBP10.92□□□□□ -0.66
SKP1P1-201ENST00000438081 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
SKP1P1-201ENST00000438081 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
SKP1P1-201ENST00000438081 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
SKP1P1-201ENST00000438081 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
SKP1P1-201ENST00000438081 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
SKP1P1-201ENST00000438081 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
SKP1P1-201ENST00000438081 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
SKP1P1-201ENST00000438081 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
SKP1P1-201ENST00000438081 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
SKP1P1-201ENST00000438081 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
SKP1P1-201ENST00000438081 RTN4Q9NQC3 1192 aaKnown RBP10.48□□□□□ -0.73
SKP1P1-201ENST00000438081 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
SKP1P1-201ENST00000438081 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
SKP1P1-201ENST00000438081 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
SKP1P1-201ENST00000438081 MIER1Q8N108 512 aa10.44□□□□□ -0.74
SKP1P1-201ENST00000438081 MNX1P50219 401 aaPredicted RBP10.43□□□□□ -0.74
SKP1P1-201ENST00000438081 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
SKP1P1-201ENST00000438081 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
SKP1P1-201ENST00000438081 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
SKP1P1-201ENST00000438081 CHRDL2Q6WN34 429 aa10.36□□□□□ -0.75
SKP1P1-201ENST00000438081 SPOCK2Q92563 424 aa10.33□□□□□ -0.76
SKP1P1-201ENST00000438081 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
SKP1P1-201ENST00000438081 NUBP1P53384 320 aa10.3□□□□□ -0.76
SKP1P1-201ENST00000438081 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
SKP1P1-201ENST00000438081 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
SKP1P1-201ENST00000438081 ZBTB47Q9UFB7 747 aaPredicted RBP10.3□□□□□ -0.76
SKP1P1-201ENST00000438081 PKD2Q13563 968 aa10.29□□□□□ -0.76
SKP1P1-201ENST00000438081 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
SKP1P1-201ENST00000438081 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
SKP1P1-201ENST00000438081 FARP1Q9Y4F1 1045 aaPredicted RBP10.23□□□□□ -0.77
SKP1P1-201ENST00000438081 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
SKP1P1-201ENST00000438081 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
SKP1P1-201ENST00000438081 GSE1Q14687 1217 aa10.1□□□□□ -0.79
SKP1P1-201ENST00000438081 CIZ1Q9ULV3 898 aaPredicted RBP10.09□□□□□ -0.79
SKP1P1-201ENST00000438081 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
SKP1P1-201ENST00000438081 FAM212AQ96EL1 285 aa10.07□□□□□ -0.8
SKP1P1-201ENST00000438081 CHRM1P11229 460 aaPredicted RBP10.06□□□□□ -0.8
SKP1P1-201ENST00000438081 DCAF8Q5TAQ9 597 aa10.06□□□□□ -0.8
SKP1P1-201ENST00000438081 TRIM41Q8WV44 630 aa10.06□□□□□ -0.8
SKP1P1-201ENST00000438081 RGL2O15211 777 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms