RNA–Protein interactions for RNA: ENST00000437379.2

HDAC11-213, Transcript of histone deacetylase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC11, Length 2,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-213ENST00000437379 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
HDAC11-213ENST00000437379 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
HDAC11-213ENST00000437379 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
HDAC11-213ENST00000437379 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
HDAC11-213ENST00000437379 CCDC180Q9P1Z9 1646 aa25.05■■□□□ 1.6
HDAC11-213ENST00000437379 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
HDAC11-213ENST00000437379 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
HDAC11-213ENST00000437379 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
HDAC11-213ENST00000437379 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
HDAC11-213ENST00000437379 HRCP23327 699 aa23.86■■□□□ 1.41
HDAC11-213ENST00000437379 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
HDAC11-213ENST00000437379 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
HDAC11-213ENST00000437379 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
HDAC11-213ENST00000437379 ABCC9O60706 1549 aa23.7■■□□□ 1.38
HDAC11-213ENST00000437379 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
HDAC11-213ENST00000437379 PPARGC1BQ86YN6 1023 aaKnown RBP23.48■■□□□ 1.35
HDAC11-213ENST00000437379 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
HDAC11-213ENST00000437379 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
HDAC11-213ENST00000437379 FAM9AQ8IZU1 332 aaPredicted RBP23.28■■□□□ 1.32
HDAC11-213ENST00000437379 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
HDAC11-213ENST00000437379 CECR2Q9BXF3 1484 aa23.25■■□□□ 1.31
HDAC11-213ENST00000437379 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
HDAC11-213ENST00000437379 NACADO15069 1562 aa23.18■■□□□ 1.3
HDAC11-213ENST00000437379 MROH2BQ7Z745 1585 aa23.15■■□□□ 1.3
HDAC11-213ENST00000437379 WIZO95785 1651 aa23.03■■□□□ 1.28
HDAC11-213ENST00000437379 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
HDAC11-213ENST00000437379 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
HDAC11-213ENST00000437379 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
HDAC11-213ENST00000437379 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
HDAC11-213ENST00000437379 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.2
HDAC11-213ENST00000437379 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
HDAC11-213ENST00000437379 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
HDAC11-213ENST00000437379 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.2
HDAC11-213ENST00000437379 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
HDAC11-213ENST00000437379 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.19
HDAC11-213ENST00000437379 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
HDAC11-213ENST00000437379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
HDAC11-213ENST00000437379 SOGA1O94964 1423 aa22.42■■□□□ 1.18
HDAC11-213ENST00000437379 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.16
HDAC11-213ENST00000437379 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
HDAC11-213ENST00000437379 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
HDAC11-213ENST00000437379 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
HDAC11-213ENST00000437379 CSRNP3Q8WYN3 585 aa22.26■■□□□ 1.15
HDAC11-213ENST00000437379 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
HDAC11-213ENST00000437379 UBTFP17480 764 aaKnown RBP22.25■■□□□ 1.15
HDAC11-213ENST00000437379 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.155e-6■■■■■ 29.2
HDAC11-213ENST00000437379 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
HDAC11-213ENST00000437379 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
HDAC11-213ENST00000437379 EEA1Q15075 1411 aa22.13■■□□□ 1.13
HDAC11-213ENST00000437379 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
HDAC11-213ENST00000437379 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
HDAC11-213ENST00000437379 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
HDAC11-213ENST00000437379 ATAD2BQ9ULI0 1458 aa22■■□□□ 1.11
HDAC11-213ENST00000437379 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
HDAC11-213ENST00000437379 DIEXFQ68CQ4 756 aaKnown RBP21.92■■□□□ 1.1
HDAC11-213ENST00000437379 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
HDAC11-213ENST00000437379 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
HDAC11-213ENST00000437379 ACIN1Q9UKV3 1341 aaKnown RBP21.91■■□□□ 1.1
HDAC11-213ENST00000437379 CLIP1P30622 1438 aa21.87■■□□□ 1.09
HDAC11-213ENST00000437379 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
HDAC11-213ENST00000437379 KIF21BO75037 1637 aa21.85■■□□□ 1.09
HDAC11-213ENST00000437379 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
HDAC11-213ENST00000437379 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
HDAC11-213ENST00000437379 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
HDAC11-213ENST00000437379 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
HDAC11-213ENST00000437379 APLP2Q06481 763 aa21.7■■□□□ 1.07
HDAC11-213ENST00000437379 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
HDAC11-213ENST00000437379 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
HDAC11-213ENST00000437379 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
HDAC11-213ENST00000437379 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.04
HDAC11-213ENST00000437379 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
HDAC11-213ENST00000437379 CUX1P39880 1505 aa21.52■■□□□ 1.04
HDAC11-213ENST00000437379 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.03
HDAC11-213ENST00000437379 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
HDAC11-213ENST00000437379 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
HDAC11-213ENST00000437379 ARAP1Q96P48 1450 aa21.5■■□□□ 1.03
HDAC11-213ENST00000437379 MIER1Q8N108 512 aa21.48■■□□□ 1.03
HDAC11-213ENST00000437379 ERICH3Q5RHP9 1530 aa21.48■■□□□ 1.03
HDAC11-213ENST00000437379 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
HDAC11-213ENST00000437379 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
HDAC11-213ENST00000437379 CFTRP13569 1480 aa21.39■■□□□ 1.01
HDAC11-213ENST00000437379 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
HDAC11-213ENST00000437379 ARHGAP35Q9NRY4 1499 aa21.3■■□□□ 1
HDAC11-213ENST00000437379 ITGAEP38570 1179 aa21.28■■□□□ 1
HDAC11-213ENST00000437379 RRBP1Q9P2E9 1410 aaKnown RBP21.25■□□□□ 0.99
HDAC11-213ENST00000437379 CUX2O14529 1486 aa21.24■□□□□ 0.99
HDAC11-213ENST00000437379 IGF1RP08069 1367 aa21.23■□□□□ 0.99
HDAC11-213ENST00000437379 CLSPNQ9HAW4 1339 aa21.21■□□□□ 0.99
HDAC11-213ENST00000437379 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
HDAC11-213ENST00000437379 MYT1Q01538 1121 aa21.18■□□□□ 0.98
HDAC11-213ENST00000437379 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
HDAC11-213ENST00000437379 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
HDAC11-213ENST00000437379 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
HDAC11-213ENST00000437379 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
HDAC11-213ENST00000437379 P3H3Q8IVL6 736 aa21.1■□□□□ 0.97
HDAC11-213ENST00000437379 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
HDAC11-213ENST00000437379 TIAM1Q13009 1591 aa21.04■□□□□ 0.96
HDAC11-213ENST00000437379 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
HDAC11-213ENST00000437379 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
HDAC11-213ENST00000437379 PHLDB1Q86UU1 1377 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms