RNA–Protein interactions for RNA: ENST00000437212.7

TMPRSS4-201, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-201ENST00000437212 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
TMPRSS4-201ENST00000437212 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
TMPRSS4-201ENST00000437212 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
TMPRSS4-201ENST00000437212 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
TMPRSS4-201ENST00000437212 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
TMPRSS4-201ENST00000437212 DCAF1Q9Y4B6 1507 aa26.81■■□□□ 1.88
TMPRSS4-201ENST00000437212 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
TMPRSS4-201ENST00000437212 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.84
TMPRSS4-201ENST00000437212 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
TMPRSS4-201ENST00000437212 HRCP23327 699 aa26.13■■□□□ 1.77
TMPRSS4-201ENST00000437212 ABCC9O60706 1549 aa26.08■■□□□ 1.77
TMPRSS4-201ENST00000437212 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
TMPRSS4-201ENST00000437212 SCRIBQ14160 1630 aa25.79■■□□□ 1.72
TMPRSS4-201ENST00000437212 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
TMPRSS4-201ENST00000437212 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
TMPRSS4-201ENST00000437212 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
TMPRSS4-201ENST00000437212 NACADO15069 1562 aa25.52■■□□□ 1.68
TMPRSS4-201ENST00000437212 TRIM26Q12899 539 aaPredicted RBP25.48■■□□□ 1.67
TMPRSS4-201ENST00000437212 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
TMPRSS4-201ENST00000437212 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
TMPRSS4-201ENST00000437212 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
TMPRSS4-201ENST00000437212 MROH2BQ7Z745 1585 aa25.2■■□□□ 1.63
TMPRSS4-201ENST00000437212 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
TMPRSS4-201ENST00000437212 WIZO95785 1651 aa25.1■■□□□ 1.61
TMPRSS4-201ENST00000437212 BAZ1AQ9NRL2 1556 aaPredicted RBP25.08■■□□□ 1.61
TMPRSS4-201ENST00000437212 FAM9AQ8IZU1 332 aaPredicted RBP25.02■■□□□ 1.6
TMPRSS4-201ENST00000437212 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
TMPRSS4-201ENST00000437212 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
TMPRSS4-201ENST00000437212 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
TMPRSS4-201ENST00000437212 EHMT2Q96KQ7 1210 aa24.69■■□□□ 1.54
TMPRSS4-201ENST00000437212 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
TMPRSS4-201ENST00000437212 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
TMPRSS4-201ENST00000437212 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
TMPRSS4-201ENST00000437212 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
TMPRSS4-201ENST00000437212 WRNQ14191 1432 aaPredicted RBP eCLIP24.51■■□□□ 1.51
TMPRSS4-201ENST00000437212 EEA1Q15075 1411 aa24.48■■□□□ 1.51
TMPRSS4-201ENST00000437212 CEP162Q5TB80 1403 aa24.39■■□□□ 1.49
TMPRSS4-201ENST00000437212 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
TMPRSS4-201ENST00000437212 SOGA1O94964 1423 aa24.33■■□□□ 1.49
TMPRSS4-201ENST00000437212 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
TMPRSS4-201ENST00000437212 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
TMPRSS4-201ENST00000437212 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
TMPRSS4-201ENST00000437212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.26■■□□□ 1.47
TMPRSS4-201ENST00000437212 CSRNP3Q8WYN3 585 aa24.25■■□□□ 1.47
TMPRSS4-201ENST00000437212 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
TMPRSS4-201ENST00000437212 RUSC2Q8N2Y8 1516 aa24.17■■□□□ 1.46
TMPRSS4-201ENST00000437212 UBTFP17480 764 aaKnown RBP24.12■■□□□ 1.45
TMPRSS4-201ENST00000437212 KIF21BO75037 1637 aa24.12■■□□□ 1.45
TMPRSS4-201ENST00000437212 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
TMPRSS4-201ENST00000437212 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
TMPRSS4-201ENST00000437212 PELP1Q8IZL8 1130 aaKnown RBP24.09■■□□□ 1.45
TMPRSS4-201ENST00000437212 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
TMPRSS4-201ENST00000437212 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
TMPRSS4-201ENST00000437212 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
TMPRSS4-201ENST00000437212 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
TMPRSS4-201ENST00000437212 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
TMPRSS4-201ENST00000437212 DIEXFQ68CQ4 756 aaKnown RBP23.95■■□□□ 1.42
TMPRSS4-201ENST00000437212 CLIP1P30622 1438 aa23.91■■□□□ 1.42
TMPRSS4-201ENST00000437212 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
TMPRSS4-201ENST00000437212 VPS8Q8N3P4 1428 aa23.87■■□□□ 1.41
TMPRSS4-201ENST00000437212 TOP2BQ02880 1626 aa23.83■■□□□ 1.41
TMPRSS4-201ENST00000437212 CENPBP07199 599 aaPredicted RBP23.82■■□□□ 1.4
TMPRSS4-201ENST00000437212 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
TMPRSS4-201ENST00000437212 RAPGEF2Q9Y4G8 1499 aa23.77■■□□□ 1.4
TMPRSS4-201ENST00000437212 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
TMPRSS4-201ENST00000437212 NEUROD1Q13562 356 aa23.75■■□□□ 1.39
TMPRSS4-201ENST00000437212 APLP2Q06481 763 aa23.72■■□□□ 1.39
TMPRSS4-201ENST00000437212 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.39
TMPRSS4-201ENST00000437212 HNRNPUL2Q1KMD3 747 aaKnown RBP23.63■■□□□ 1.37
TMPRSS4-201ENST00000437212 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
TMPRSS4-201ENST00000437212 PRXQ9BXM0 1461 aa23.59■■□□□ 1.37
TMPRSS4-201ENST00000437212 GTF3C3Q9Y5Q9 886 aa23.55■■□□□ 1.36
TMPRSS4-201ENST00000437212 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
TMPRSS4-201ENST00000437212 ARAP1Q96P48 1450 aa23.5■■□□□ 1.35
TMPRSS4-201ENST00000437212 CLSPNQ9HAW4 1339 aa23.49■■□□□ 1.35
TMPRSS4-201ENST00000437212 CUX1P39880 1505 aa23.48■■□□□ 1.35
TMPRSS4-201ENST00000437212 KIF27Q86VH2 1401 aa23.45■■□□□ 1.35
TMPRSS4-201ENST00000437212 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
TMPRSS4-201ENST00000437212 CFTRP13569 1480 aa23.4■■□□□ 1.34
TMPRSS4-201ENST00000437212 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
TMPRSS4-201ENST00000437212 MIER1Q8N108 512 aa23.35■■□□□ 1.33
TMPRSS4-201ENST00000437212 RRBP1Q9P2E9 1410 aaKnown RBP23.35■■□□□ 1.33
TMPRSS4-201ENST00000437212 DHX57Q6P158 1386 aaKnown RBP23.34■■□□□ 1.33
TMPRSS4-201ENST00000437212 CUX2O14529 1486 aa23.29■■□□□ 1.32
TMPRSS4-201ENST00000437212 YTHDC1Q96MU7 727 aaKnown RBP23.27■■□□□ 1.32
TMPRSS4-201ENST00000437212 KANK4Q5T7N3 995 aaPredicted RBP23.26■■□□□ 1.31
TMPRSS4-201ENST00000437212 ARHGAP35Q9NRY4 1499 aa23.26■■□□□ 1.31
TMPRSS4-201ENST00000437212 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
TMPRSS4-201ENST00000437212 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
TMPRSS4-201ENST00000437212 TIAM1Q13009 1591 aa23.12■■□□□ 1.29
TMPRSS4-201ENST00000437212 IGF1RP08069 1367 aa23.1■■□□□ 1.29
TMPRSS4-201ENST00000437212 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
TMPRSS4-201ENST00000437212 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
TMPRSS4-201ENST00000437212 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
TMPRSS4-201ENST00000437212 CFAP43Q8NDM7 1665 aa23■■□□□ 1.27
TMPRSS4-201ENST00000437212 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
TMPRSS4-201ENST00000437212 LRRC9Q6ZRR7 1453 aa22.99■■□□□ 1.27
TMPRSS4-201ENST00000437212 MYT1Q01538 1121 aa22.97■■□□□ 1.27
TMPRSS4-201ENST00000437212 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
TMPRSS4-201ENST00000437212 MAPKBP1O60336 1514 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms