RNA–Protein interactions for RNA: ENST00000436587.6

C1GALT1-205, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C1GALT1, Length 6,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-205ENST00000436587 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
C1GALT1-205ENST00000436587 DCAF8L2P0C7V8 631 aa22.49■■□□□ 1.19
C1GALT1-205ENST00000436587 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
C1GALT1-205ENST00000436587 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
C1GALT1-205ENST00000436587 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.85
C1GALT1-205ENST00000436587 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
C1GALT1-205ENST00000436587 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
C1GALT1-205ENST00000436587 APLP2Q06481 763 aa19.94■□□□□ 0.78
C1GALT1-205ENST00000436587 PCGF6Q9BYE7 350 aa19.94■□□□□ 0.78
C1GALT1-205ENST00000436587 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
C1GALT1-205ENST00000436587 ABCC9O60706 1549 aa19.9■□□□□ 0.78
C1GALT1-205ENST00000436587 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
C1GALT1-205ENST00000436587 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
C1GALT1-205ENST00000436587 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
C1GALT1-205ENST00000436587 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
C1GALT1-205ENST00000436587 ZEB1P37275 1124 aaPredicted RBP19.57■□□□□ 0.72
C1GALT1-205ENST00000436587 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
C1GALT1-205ENST00000436587 LOC105371045A0A1W2PR82 267 aa19.5■□□□□ 0.71
C1GALT1-205ENST00000436587 TRIM26Q12899 539 aaPredicted RBP19.44■□□□□ 0.7
C1GALT1-205ENST00000436587 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
C1GALT1-205ENST00000436587 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.69
C1GALT1-205ENST00000436587 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
C1GALT1-205ENST00000436587 PPARGC1BQ86YN6 1023 aaKnown RBP19.27■□□□□ 0.67
C1GALT1-205ENST00000436587 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
C1GALT1-205ENST00000436587 HRCP23327 699 aa19.21■□□□□ 0.67
C1GALT1-205ENST00000436587 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
C1GALT1-205ENST00000436587 NACADO15069 1562 aa19.04■□□□□ 0.64
C1GALT1-205ENST00000436587 RB1CC1Q8TDY2 1594 aa19.04■□□□□ 0.64
C1GALT1-205ENST00000436587 PELP1Q8IZL8 1130 aaKnown RBP18.99■□□□□ 0.63
C1GALT1-205ENST00000436587 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
C1GALT1-205ENST00000436587 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
C1GALT1-205ENST00000436587 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
C1GALT1-205ENST00000436587 CSRNP3Q8WYN3 585 aa18.84■□□□□ 0.61
C1GALT1-205ENST00000436587 ITGAEP38570 1179 aa18.78■□□□□ 0.6
C1GALT1-205ENST00000436587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
C1GALT1-205ENST00000436587 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
C1GALT1-205ENST00000436587 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
C1GALT1-205ENST00000436587 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.56
C1GALT1-205ENST00000436587 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
C1GALT1-205ENST00000436587 FAM50AQ14320 339 aaKnown RBP18.51■□□□□ 0.55
C1GALT1-205ENST00000436587 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
C1GALT1-205ENST00000436587 EEA1Q15075 1411 aa18.45■□□□□ 0.54
C1GALT1-205ENST00000436587 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
C1GALT1-205ENST00000436587 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
C1GALT1-205ENST00000436587 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
C1GALT1-205ENST00000436587 NEFLP07196 543 aa18.36■□□□□ 0.53
C1GALT1-205ENST00000436587 P3H3Q8IVL6 736 aa18.35■□□□□ 0.53
C1GALT1-205ENST00000436587 GOLGA3Q08378 1498 aa18.3■□□□□ 0.52
C1GALT1-205ENST00000436587 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
C1GALT1-205ENST00000436587 FBLN2P98095 1184 aa18.27■□□□□ 0.52
C1GALT1-205ENST00000436587 CLIP1P30622 1438 aa18.27■□□□□ 0.52
C1GALT1-205ENST00000436587 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
C1GALT1-205ENST00000436587 CEP162Q5TB80 1403 aa18.25■□□□□ 0.51
C1GALT1-205ENST00000436587 NEUROD1Q13562 356 aa18.22■□□□□ 0.51
C1GALT1-205ENST00000436587 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
C1GALT1-205ENST00000436587 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
C1GALT1-205ENST00000436587 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
C1GALT1-205ENST00000436587 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
C1GALT1-205ENST00000436587 POLR3GLQ9BT43 218 aa18.17■□□□□ 0.5
C1GALT1-205ENST00000436587 WIZO95785 1651 aa18.16■□□□□ 0.5
C1GALT1-205ENST00000436587 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
C1GALT1-205ENST00000436587 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
C1GALT1-205ENST00000436587 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
C1GALT1-205ENST00000436587 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
C1GALT1-205ENST00000436587 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
C1GALT1-205ENST00000436587 SOGA1O94964 1423 aa18.06■□□□□ 0.48
C1GALT1-205ENST00000436587 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
C1GALT1-205ENST00000436587 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
C1GALT1-205ENST00000436587 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
C1GALT1-205ENST00000436587 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
C1GALT1-205ENST00000436587 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
C1GALT1-205ENST00000436587 ANP32CO43423 234 aa17.94■□□□□ 0.46
C1GALT1-205ENST00000436587 CNGB1Q14028 1251 aaPredicted RBP17.93■□□□□ 0.46
C1GALT1-205ENST00000436587 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
C1GALT1-205ENST00000436587 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
C1GALT1-205ENST00000436587 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
C1GALT1-205ENST00000436587 CUX2O14529 1486 aa17.87■□□□□ 0.45
C1GALT1-205ENST00000436587 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
C1GALT1-205ENST00000436587 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
C1GALT1-205ENST00000436587 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
C1GALT1-205ENST00000436587 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
C1GALT1-205ENST00000436587 VPS8Q8N3P4 1428 aa17.79■□□□□ 0.44
C1GALT1-205ENST00000436587 CHIC2Q9UKJ5 165 aa17.78■□□□□ 0.44
C1GALT1-205ENST00000436587 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
C1GALT1-205ENST00000436587 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
C1GALT1-205ENST00000436587 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
C1GALT1-205ENST00000436587 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
C1GALT1-205ENST00000436587 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
C1GALT1-205ENST00000436587 TSPY4P0CV99 314 aa17.67■□□□□ 0.42
C1GALT1-205ENST00000436587 TSPY10P0CW01 314 aa17.67■□□□□ 0.42
C1GALT1-205ENST00000436587 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
C1GALT1-205ENST00000436587 CLSPNQ9HAW4 1339 aa17.65■□□□□ 0.42
C1GALT1-205ENST00000436587 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
C1GALT1-205ENST00000436587 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
C1GALT1-205ENST00000436587 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
C1GALT1-205ENST00000436587 MYT1Q01538 1121 aa17.62■□□□□ 0.41
C1GALT1-205ENST00000436587 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
C1GALT1-205ENST00000436587 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
C1GALT1-205ENST00000436587 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
C1GALT1-205ENST00000436587 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms