RNA–Protein interactions for RNA: ENST00000434832.1

LINC01078-201, Transcript of long intergenic non-protein coding RNA 1078, humanhuman

TSL 5 BASIC

Gene LINC01078, Length 387 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01078-201ENST00000434832 AEBP2Q6ZN18 517 aaPredicted RBP27.92■■■□□ 2.06
LINC01078-201ENST00000434832 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
LINC01078-201ENST00000434832 SENP3Q9H4L4 574 aaPredicted RBP23.72■■□□□ 1.39
LINC01078-201ENST00000434832 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
LINC01078-201ENST00000434832 FOXD1Q16676 465 aa22.2■■□□□ 1.14
LINC01078-201ENST00000434832 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
LINC01078-201ENST00000434832 MSH5O43196 834 aa20.73■□□□□ 0.91
LINC01078-201ENST00000434832 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
LINC01078-201ENST00000434832 PIAS4Q8N2W9 510 aaPredicted RBP20.65■□□□□ 0.9
LINC01078-201ENST00000434832 ADRA2BP18089 450 aa20.57■□□□□ 0.88
LINC01078-201ENST00000434832 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
LINC01078-201ENST00000434832 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
LINC01078-201ENST00000434832 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
LINC01078-201ENST00000434832 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
LINC01078-201ENST00000434832 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.52
LINC01078-201ENST00000434832 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
LINC01078-201ENST00000434832 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
LINC01078-201ENST00000434832 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
LINC01078-201ENST00000434832 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
LINC01078-201ENST00000434832 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
LINC01078-201ENST00000434832 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
LINC01078-201ENST00000434832 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
LINC01078-201ENST00000434832 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
LINC01078-201ENST00000434832 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
LINC01078-201ENST00000434832 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
LINC01078-201ENST00000434832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.34
LINC01078-201ENST00000434832 KCNA4P22459 653 aa16.92■□□□□ 0.3
LINC01078-201ENST00000434832 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
LINC01078-201ENST00000434832 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
LINC01078-201ENST00000434832 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
LINC01078-201ENST00000434832 DSG3P32926 999 aa16.58■□□□□ 0.24
LINC01078-201ENST00000434832 CAPN15O75808 1086 aa16.56■□□□□ 0.24
LINC01078-201ENST00000434832 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
LINC01078-201ENST00000434832 APLP2Q06481 763 aa16.22■□□□□ 0.19
LINC01078-201ENST00000434832 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
LINC01078-201ENST00000434832 ABCB7O75027 752 aa16.21■□□□□ 0.19
LINC01078-201ENST00000434832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
LINC01078-201ENST00000434832 HNRNPUL2Q1KMD3 747 aaKnown RBP16.2■□□□□ 0.18
LINC01078-201ENST00000434832 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
LINC01078-201ENST00000434832 POTEHQ6S545 545 aa16.05■□□□□ 0.16
LINC01078-201ENST00000434832 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
LINC01078-201ENST00000434832 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
LINC01078-201ENST00000434832 POLA2Q14181 598 aa15.82■□□□□ 0.12
LINC01078-201ENST00000434832 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
LINC01078-201ENST00000434832 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
LINC01078-201ENST00000434832 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
LINC01078-201ENST00000434832 ZBTB22O15209 634 aa15.6■□□□□ 0.09
LINC01078-201ENST00000434832 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
LINC01078-201ENST00000434832 ZBTB12Q9Y330 459 aaPredicted RBP15.42■□□□□ 0.06
LINC01078-201ENST00000434832 AKT1S1Q96B36 256 aa15.37■□□□□ 0.05
LINC01078-201ENST00000434832 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
LINC01078-201ENST00000434832 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
LINC01078-201ENST00000434832 REM2Q8IYK8 340 aaPredicted RBP15.26■□□□□ 0.03
LINC01078-201ENST00000434832 PIP4P2Q8N4L2 257 aa15.13■□□□□ 0.01
LINC01078-201ENST00000434832 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
LINC01078-201ENST00000434832 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
LINC01078-201ENST00000434832 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
LINC01078-201ENST00000434832 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
LINC01078-201ENST00000434832 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
LINC01078-201ENST00000434832 FBLN2P98095 1184 aa14.99□□□□□ -0.01
LINC01078-201ENST00000434832 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
LINC01078-201ENST00000434832 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
LINC01078-201ENST00000434832 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
LINC01078-201ENST00000434832 HAX1O00165 279 aa14.82□□□□□ -0.04
LINC01078-201ENST00000434832 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
LINC01078-201ENST00000434832 EVX2Q03828 476 aa14.75□□□□□ -0.05
LINC01078-201ENST00000434832 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
LINC01078-201ENST00000434832 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
LINC01078-201ENST00000434832 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
LINC01078-201ENST00000434832 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
LINC01078-201ENST00000434832 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
LINC01078-201ENST00000434832 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
LINC01078-201ENST00000434832 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
LINC01078-201ENST00000434832 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
LINC01078-201ENST00000434832 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
LINC01078-201ENST00000434832 GABBR2O75899 941 aa14.34□□□□□ -0.11
LINC01078-201ENST00000434832 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
LINC01078-201ENST00000434832 CD44P16070 742 aaKnown RBP14.21□□□□□ -0.13
LINC01078-201ENST00000434832 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
LINC01078-201ENST00000434832 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
LINC01078-201ENST00000434832 POTEIP0CG38 1075 aa14.11□□□□□ -0.15
LINC01078-201ENST00000434832 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
LINC01078-201ENST00000434832 LHX8Q68G74 356 aa14.03□□□□□ -0.16
LINC01078-201ENST00000434832 ZNF579Q8NAF0 562 aaKnown RBP14.01□□□□□ -0.17
LINC01078-201ENST00000434832 CLCN6P51797 869 aa13.97□□□□□ -0.17
LINC01078-201ENST00000434832 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
LINC01078-201ENST00000434832 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
LINC01078-201ENST00000434832 GALR2O43603 387 aaPredicted RBP13.87□□□□□ -0.19
LINC01078-201ENST00000434832 PROM2Q8N271 834 aa13.85□□□□□ -0.19
LINC01078-201ENST00000434832 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
LINC01078-201ENST00000434832 PHF12Q96QT6 1004 aa13.82□□□□□ -0.2
LINC01078-201ENST00000434832 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01078-201ENST00000434832 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
LINC01078-201ENST00000434832 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
LINC01078-201ENST00000434832 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
LINC01078-201ENST00000434832 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
LINC01078-201ENST00000434832 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
LINC01078-201ENST00000434832 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
LINC01078-201ENST00000434832 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
LINC01078-201ENST00000434832 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms