RNA–Protein interactions for RNA: ENST00000433383.1

NEK4P1-201, Transcript of NIMA-related kinase 4 pseudogene 1, humanhuman

BASIC

Gene NEK4P1, Length 879 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P1-201ENST00000433383 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
NEK4P1-201ENST00000433383 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
NEK4P1-201ENST00000433383 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
NEK4P1-201ENST00000433383 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
NEK4P1-201ENST00000433383 FOXD1Q16676 465 aa23.59■■□□□ 1.37
NEK4P1-201ENST00000433383 POTEDQ86YR6 584 aa22.97■■□□□ 1.27
NEK4P1-201ENST00000433383 MSH5O43196 834 aa22.16■■□□□ 1.14
NEK4P1-201ENST00000433383 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
NEK4P1-201ENST00000433383 PIAS4Q8N2W9 510 aaPredicted RBP21.98■■□□□ 1.11
NEK4P1-201ENST00000433383 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
NEK4P1-201ENST00000433383 ADRA2BP18089 450 aa21.77■■□□□ 1.08
NEK4P1-201ENST00000433383 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
NEK4P1-201ENST00000433383 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
NEK4P1-201ENST00000433383 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
NEK4P1-201ENST00000433383 PPP4R3CPQ6ZMV5 832 aa19.35■□□□□ 0.69
NEK4P1-201ENST00000433383 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
NEK4P1-201ENST00000433383 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
NEK4P1-201ENST00000433383 HOXD11P31277 338 aaPredicted RBP19.15■□□□□ 0.66
NEK4P1-201ENST00000433383 CNKSR2Q8WXI2 1034 aa19.04■□□□□ 0.64
NEK4P1-201ENST00000433383 RNF216Q9NWF9 866 aaPredicted RBP18.94■□□□□ 0.62
NEK4P1-201ENST00000433383 RNF39Q9H2S5 420 aa18.9■□□□□ 0.62
NEK4P1-201ENST00000433383 C1QBPQ07021 282 aaKnown RBP18.59■□□□□ 0.57
NEK4P1-201ENST00000433383 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
NEK4P1-201ENST00000433383 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
NEK4P1-201ENST00000433383 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
NEK4P1-201ENST00000433383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
NEK4P1-201ENST00000433383 U3KPZ7 1027 aaPredicted RBP17.86■□□□□ 0.45
NEK4P1-201ENST00000433383 POTEHQ6S545 545 aa17.82■□□□□ 0.44
NEK4P1-201ENST00000433383 KCNA4P22459 653 aa17.7■□□□□ 0.42
NEK4P1-201ENST00000433383 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
NEK4P1-201ENST00000433383 CAPN15O75808 1086 aa17.65■□□□□ 0.42
NEK4P1-201ENST00000433383 DSG3P32926 999 aa17.6■□□□□ 0.41
NEK4P1-201ENST00000433383 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
NEK4P1-201ENST00000433383 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
NEK4P1-201ENST00000433383 APLP2Q06481 763 aa17.28■□□□□ 0.36
NEK4P1-201ENST00000433383 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
NEK4P1-201ENST00000433383 ABCB7O75027 752 aa17.24■□□□□ 0.35
NEK4P1-201ENST00000433383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
NEK4P1-201ENST00000433383 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
NEK4P1-201ENST00000433383 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
NEK4P1-201ENST00000433383 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
NEK4P1-201ENST00000433383 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
NEK4P1-201ENST00000433383 POLA2Q14181 598 aa16.77■□□□□ 0.28
NEK4P1-201ENST00000433383 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
NEK4P1-201ENST00000433383 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
NEK4P1-201ENST00000433383 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
NEK4P1-201ENST00000433383 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
NEK4P1-201ENST00000433383 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
NEK4P1-201ENST00000433383 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
NEK4P1-201ENST00000433383 ZBTB22O15209 634 aa16.29■□□□□ 0.2
NEK4P1-201ENST00000433383 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
NEK4P1-201ENST00000433383 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
NEK4P1-201ENST00000433383 SP7Q8TDD2 431 aaPredicted RBP16.2■□□□□ 0.18
NEK4P1-201ENST00000433383 PIP4P2Q8N4L2 257 aa16.1■□□□□ 0.17
NEK4P1-201ENST00000433383 ATXN8OSP0DMR3 200 aa16.08■□□□□ 0.16
NEK4P1-201ENST00000433383 PITPNM1O00562 1244 aa16.06■□□□□ 0.16
NEK4P1-201ENST00000433383 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
NEK4P1-201ENST00000433383 FBLN2P98095 1184 aa15.9■□□□□ 0.14
NEK4P1-201ENST00000433383 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
NEK4P1-201ENST00000433383 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
NEK4P1-201ENST00000433383 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
NEK4P1-201ENST00000433383 HAX1O00165 279 aa15.87■□□□□ 0.13
NEK4P1-201ENST00000433383 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
NEK4P1-201ENST00000433383 EVX2Q03828 476 aa15.67■□□□□ 0.1
NEK4P1-201ENST00000433383 SPDYE1Q8NFV5 336 aaPredicted RBP15.67■□□□□ 0.1
NEK4P1-201ENST00000433383 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
NEK4P1-201ENST00000433383 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
NEK4P1-201ENST00000433383 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
NEK4P1-201ENST00000433383 PRKAR2AP13861 404 aaKnown RBP15.63■□□□□ 0.09
NEK4P1-201ENST00000433383 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
NEK4P1-201ENST00000433383 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
NEK4P1-201ENST00000433383 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
NEK4P1-201ENST00000433383 PRR29P0C7W0 189 aa15.36■□□□□ 0.05
NEK4P1-201ENST00000433383 GABBR2O75899 941 aa15.29■□□□□ 0.04
NEK4P1-201ENST00000433383 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
NEK4P1-201ENST00000433383 LHX8Q68G74 356 aa15.19■□□□□ 0.02
NEK4P1-201ENST00000433383 FARP1Q9Y4F1 1045 aaPredicted RBP15.14■□□□□ 0.01
NEK4P1-201ENST00000433383 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
NEK4P1-201ENST00000433383 PLSCR2Q9NRY7 297 aa15.11■□□□□ 0.01
NEK4P1-201ENST00000433383 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
NEK4P1-201ENST00000433383 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
NEK4P1-201ENST00000433383 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
NEK4P1-201ENST00000433383 CLCN6P51797 869 aa14.91□□□□□ -0.02
NEK4P1-201ENST00000433383 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
NEK4P1-201ENST00000433383 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
NEK4P1-201ENST00000433383 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
NEK4P1-201ENST00000433383 ZRANB1Q9UGI0 708 aa14.86□□□□□ -0.03
NEK4P1-201ENST00000433383 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
NEK4P1-201ENST00000433383 GALR2O43603 387 aaPredicted RBP14.72□□□□□ -0.05
NEK4P1-201ENST00000433383 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
NEK4P1-201ENST00000433383 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
NEK4P1-201ENST00000433383 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
NEK4P1-201ENST00000433383 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
NEK4P1-201ENST00000433383 PROM2Q8N271 834 aa14.49□□□□□ -0.09
NEK4P1-201ENST00000433383 POTEB2H3BUK9 544 aa14.48□□□□□ -0.09
NEK4P1-201ENST00000433383 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
NEK4P1-201ENST00000433383 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
NEK4P1-201ENST00000433383 MS4A3Q96HJ5 214 aa14.45□□□□□ -0.1
NEK4P1-201ENST00000433383 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
NEK4P1-201ENST00000433383 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms